Edem038285.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Epinotia demarniana
Gene Symbol
nfxl1
Assembly
GCA_945869435.1
Location
CAMBUM010000852.1:410778-413249[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 1 5.2e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 20 0.032 1.7e+03 0.7 0.4 4 10 169 175 168 175 0.96
3 20 1.5e-07 0.008 17.7 15.9 3 19 186 202 185 202 0.95
4 20 1.4e-05 0.7 11.4 10.6 3 18 239 254 237 255 0.91
5 20 0.06 3.1e+03 -0.2 0.7 5 10 279 284 279 286 0.88
6 20 2.2e-09 0.00012 23.5 12.6 1 19 290 308 290 308 0.99
7 20 3.6e-08 0.0019 19.7 16.4 3 19 345 361 336 361 0.88
8 20 0.37 1.9e+04 -2.7 0.2 1 4 370 373 370 375 0.92
9 20 1 5.2e+04 -5.3 2.2 5 10 384 389 384 389 0.88
10 20 3e-06 0.15 13.6 18.3 1 18 395 412 395 413 0.97
11 20 4e-10 2.1e-05 25.9 14.4 1 19 422 440 422 440 0.99
12 20 4e-05 2.1 9.9 5.2 9 19 488 498 486 498 0.89
13 20 0.0054 2.8e+02 3.1 4.8 4 11 510 517 508 518 0.88
14 20 0.19 9.6e+03 -1.8 3.3 14 18 547 551 547 552 0.85
15 20 0.11 5.5e+03 -1.0 0.4 8 12 568 572 567 579 0.79
16 20 0.00054 28 6.3 5.1 1 11 588 598 582 599 0.91
17 20 0.42 2.2e+04 -2.9 1.5 15 18 613 616 612 617 0.82
18 20 0.00024 12 7.4 14.3 1 18 628 645 628 646 0.90
19 20 1 5.2e+04 -5.1 2.4 9 13 652 656 651 656 0.74
20 20 0.00087 45 5.7 11.5 1 16 687 701 687 706 0.88

Sequence Information

Coding Sequence
ATGGCCAGGCGATACCACGATGCAGCTGCAAAACTGCAGCAAAATGTTCAAAAACATTTGAAGGGAATGAAAGAGCTTTCGTCGTCTGAAGATGAGGCGCCGTACGAGTCGAGCGTTCTTGAGGGTGTGTTGCAGAGCTACAGAAATGGTGGCGGCGACGCATACATGCTTAATCGCACGAAGAATATGCTGGAAGAAGCCATAAGTGGCCGTCATGTAACCTGCCTCATTTGTATAGGTTCTATCAAGAGAGCTCATCCCATCTGGACCTGTGACCACTGCCACTCCTATTTCCACCTCTCTTGCATTCAGAAGTGGTCAAACGACAGCATTAGCCTCCGGAGCGAGGAGAACCACGGCCCTATAGCAGTGTTTGTGCCCAAGAAAATCGAATGGTGCTGCCCAAAATGCCGACAATCGTACAGCAAAGAGGAAATACCTCGCAAGTATCGGTGCTTCTGTAGCAAGACTGACGACCCTCCGTTCCACCCGTGGTTGATACCACATTCCTGTGGAGAAGTGTGTGAGAAAAGGTTATCAACAGGGGATAATTGCAAGCATAAATGTCTGTTGCTGTGCCACCCTGGTCCGTGTCCGCCCTGCCCACAGACTGTCAATGGAGTGTGCTTCTGTGACAAGGAACGGAAGCGGGTTCGCTGCAGTGCTGCCAAGTGGTCTTGTAGCCAGCAGTGCAAAAAGTTACTCTCGTGCAAATCCCACAAATGTGAAAATATTTGCCATCAGGATGCCTGCCCTTCTTGCGACTATACTAGCGTCCAAGCGTGTTTGTGTGGGGCAGAGAGGGTCAAACGACCCTGCAATGATCCTCTATGGCGATGCCAGAAGCCTTGCTACAAACAGTTTTCATGTGGCTATCATAATTGTGAAGAAATATGTCATTCCGGTGAATGTGGCGACTGTCCGAACTCCGGCATGCGGTCATGCCCTTGTGGAGCTAATCAGCGCTTTGTCCAGTGCCCAGATGTCATGGAGACCTGTGCGGGGACCTGTGGGAAGACCCAGGACTACTGTGATCATACTTGTCCAGAGAAATGCCATAAAGGGCCCTGTCCTCCATGTCAAGTGCTGATAGAAAAGAAGTGTCAATGCGGCTCACATGCAAGATCTTTACCCTGCAGTAAAGaatttaaatgtgaaacaaaGTGCAGAGGTGTAAGACCTTGCGGGAAACATGGCTGTGCACGAAAGTGCTGCAACGGAAACTGTCCTCCATGTGAGAAAATCTGTGACAAGCCACTTCAGTGTGGTCGCCACAAATGCACAACAGTCTGCCATCGCGGCCCATGCTACCCTTGCCCTAGAGAATCCAAAGTGACTTGCCGCTGTAAAGAGACCTATGTAACTGTGCCATGCGGTAGAGAGAAGCATACTAAACCACCTAAATGCAGCCTCATCTGCAAGCTTAAATATAAATGTGGACACGTAGAAGAAAACAAACATTCCTGTCATTTTGGTGATTGCCCACCCTGTAAAGCGATATGCCATAGACAATATGAGAAATGTGTGCATGACTGCAAAGCCGTTTGCCATGCGTATGTAAATGTAGTTTTTAAACAGGTTGAGAAACCTGCTACACCCTGGGAGGTGCAGCCACCAAAAACCAAAGTCATGACTCTTGAATGTCCACCGTGTGAGATTCCAGTCCCTATTGTCTGCTTTGGGGACCATGAGACAGCAGACCAGCCGTGTCACTCGGCGTCCCGACGCCCCTGCGGTCGCGAGTGTGGCTGGGTGCTCCCCTGCACCAAACACAAGTGCAAATTGCTCTGCCATTTACACACACCTGATGCACTTTTCCCAAATGTCCCATCGTCATGCGAGCCATGTAATAGAGAATGCCTAGTGCCGAGACCAGAGAAATGTAGCCATAAGTGTGCTAAAGGTGTTTGCCATCCTGGCACCTGCCCATCCTGTGAAATCATGGAAAGAGTACCATGCCACTGCGGAGTAACTAAGTTGTATTTACGATGCCGTGAACTCAGCACTGCTACAGACGACATGCTGTCGTGCAAGCAGCAGTGCCCTAAGAATTTGGAGTGTGGTCATAGATGCAGGAACCTGTGCCATCCGAGCACTTGTGGGCAGCAGATCTGCACCAAGAAAACCAAGGTTTACTGTCCATGTGGTAACTTAAAGAAAGACGCTCCATGCAACCTTGTAAGGAATGGGGAAGGCAAACCGCCTTGTGATTCTACTTGTGAAGAAAAACGTAAAGCTAATCAGTTAGAAAGAGAGAAAGAAGAGAAGAGACATAAAGAGATTGAAGAGGAGAAAAACCGCAAGGAACTAGCCGAATATGAATGGAAGTTGAGTggaaagaagaagaaatataAGGAGAAGAAGGTTGTGACTAATAGAGATGATCGGaatctgttacaaaaatattggaTTCCCTTGATTTCAGTCTTAGTGGTTGTAATGGCGgctatttatttcatattttgtgTTTAA
Protein Sequence
MARRYHDAAAKLQQNVQKHLKGMKELSSSEDEAPYESSVLEGVLQSYRNGGGDAYMLNRTKNMLEEAISGRHVTCLICIGSIKRAHPIWTCDHCHSYFHLSCIQKWSNDSISLRSEENHGPIAVFVPKKIEWCCPKCRQSYSKEEIPRKYRCFCSKTDDPPFHPWLIPHSCGEVCEKRLSTGDNCKHKCLLLCHPGPCPPCPQTVNGVCFCDKERKRVRCSAAKWSCSQQCKKLLSCKSHKCENICHQDACPSCDYTSVQACLCGAERVKRPCNDPLWRCQKPCYKQFSCGYHNCEEICHSGECGDCPNSGMRSCPCGANQRFVQCPDVMETCAGTCGKTQDYCDHTCPEKCHKGPCPPCQVLIEKKCQCGSHARSLPCSKEFKCETKCRGVRPCGKHGCARKCCNGNCPPCEKICDKPLQCGRHKCTTVCHRGPCYPCPRESKVTCRCKETYVTVPCGREKHTKPPKCSLICKLKYKCGHVEENKHSCHFGDCPPCKAICHRQYEKCVHDCKAVCHAYVNVVFKQVEKPATPWEVQPPKTKVMTLECPPCEIPVPIVCFGDHETADQPCHSASRRPCGRECGWVLPCTKHKCKLLCHLHTPDALFPNVPSSCEPCNRECLVPRPEKCSHKCAKGVCHPGTCPSCEIMERVPCHCGVTKLYLRCRELSTATDDMLSCKQQCPKNLECGHRCRNLCHPSTCGQQICTKKTKVYCPCGNLKKDAPCNLVRNGEGKPPCDSTCEEKRKANQLEREKEEKRHKEIEEEKNRKELAEYEWKLSGKKKKYKEKKVVTNRDDRNLLQKYWIPLISVLVVVMAAIYFIFCV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00023391;
90% Identity
iTF_00411076;
80% Identity
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