Basic Information

Insect: Epinotia demarniana
Gene Symbol: -
Assembly: GCA_945869435.1
Location: CAMBUM010000276.1:228006-250275[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00094 0.091 14.7 2.1 1 23 259 281 259 281 0.99

2 11 0.16 15 7.7 2.4 1 21 289 309 289 312 0.87

3 11 2 2e+02 4.2 0.4 1 23 316 339 316 339 0.86

4 11 0.00091 0.089 14.7 2.6 1 23 414 436 414 436 0.99

5 11 0.003 0.29 13.1 3.1 1 23 444 467 444 467 0.97

6 11 5 4.8e+02 3.0 5.4 1 23 471 493 471 493 0.98

7 11 8.4e-05 0.0082 18.0 2.5 1 23 498 521 498 521 0.98

8 11 0.94 92 5.3 1.7 3 21 527 545 526 548 0.80

9 11 4.8e-06 0.00046 21.9 1.3 1 23 668 690 668 690 0.98

10 11 7.2e-05 0.007 18.2 0.8 1 23 696 718 696 718 0.97

11 11 3.4e-05 0.0033 19.3 2.7 1 23 724 747 724 747 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00094	0.091	14.7	2.1	1	23	259	281	259	281	0.99
2	11	0.16	15	7.7	2.4	1	21	289	309	289	312	0.87
3	11	2	2e+02	4.2	0.4	1	23	316	339	316	339	0.86
4	11	0.00091	0.089	14.7	2.6	1	23	414	436	414	436	0.99
5	11	0.003	0.29	13.1	3.1	1	23	444	467	444	467	0.97
6	11	5	4.8e+02	3.0	5.4	1	23	471	493	471	493	0.98
7	11	8.4e-05	0.0082	18.0	2.5	1	23	498	521	498	521	0.98
8	11	0.94	92	5.3	1.7	3	21	527	545	526	548	0.80
9	11	4.8e-06	0.00046	21.9	1.3	1	23	668	690	668	690	0.98
10	11	7.2e-05	0.007	18.2	0.8	1	23	696	718	696	718	0.97
11	11	3.4e-05	0.0033	19.3	2.7	1	23	724	747	724	747	0.98

Sequence Information

Coding Sequence: aTGCTTGATTTAAAAGCTTGTACAGTTTGTTTCAGTACAAATGTTAACCTATACAACATGGACTCTGGCACGTTACGGCACGAATACAACCTGATATCTGGACTAAAGACGACCGACTGCGGAGGGTTGCCCAAATATTTGTGTGTCGAGTGTTCAGCGTATATAAAACGATTTGTAAAGTTTCGGAAAAAATGCCAGCGAGCCCATTTCACACTGCGGGAACTCCAAGTGAGGAGCAAAGAGATAAGTATGCACAAACTAGAGGCTATAGACAGAAAACGCTTAGACCTAAAACCTGAGCTATCCTTCATAGATATAAATAGAACCAATTACGAAGAAGCCTACTGCCAATGGACGAAAACCAGCCGCCTAGGTCTATACTATGGTGACATAATCCCCATCATTCACCACAGCACGCACACAACCCAGGTCATTGACATGCctgagaaacttgaaactgaaTCGGAACATGTTAAAGTTGAAGAGGACGCAACAGAACCAGTAGCTCCGAGCTTGGAGCATCAAGACTTGGAACAATCTATATCAATAGTGAAAGACGCAGATGACACTGATTATTTTGATAACGACGACAATACTAGTGATCATTCCGAAGAACCACCGCCTGTTAAGAAACCAAAACTTAAAGGGAAGAGCGCAAAGAAATTGGAACCAAATGGTTCTAGTTTAGACGAGGAGTATGCCAGTATGGTGGCGATATCAGACAGGGAAGCCCAGGCTGCGGTGGATGTGTACCGGTTGTTCAGCCACGGGACGTTCCGGTGTGAAGTTTGTAACAAGGGATACCATACCCAGCTGAGATTGACAGCACATTTGCGGATGCATGATCAGCATGTGAGTGGCAACTTCCTCTGTAAGCTGTGCAACTACTACTACAAGACAGAGTATCTGCTAAAGACACACTCCACTGAGAAACATATGTATAAATATGAGTGTAAAAAGTGTACTGAAGTCAGTTTTGATCGGTTATCAGCCAAGCAGCACTACATCTGGGCGCACCTACAGAAGGGCAGGAAGAAAGACGCCAACTGGTACGAGTCCCGACCGAAATGGCTCAGCTCCAAGGGAGGCAAGCGAGTGAAGGGCGTCGTCACTATACGGCCGGTTAGGAAAATCAACAAGCTCCCACCGGACTTTCCGGTGTACTCTCCAGTGAAGCACGAAGAGCAATACACGTTGATACTAGCGCGCAAGACCTCGCGGAACTACCTGGAGGCGGAGTACAAGTGCGAGTTGTGCTACCGCGGCTTCCGCGCGCTCAACACGTACACCAAGCACATGAGGAAACACGACCCCGCGTATGCGGGCGCGTATTCGTGTGACATGTGTAAACTGCACTTCAAGTCTCCGCGCAAGGTGTACCGGCATATGAACATCACGCACCTGTTCCAGTACTCCTGCCAGCTCTGCAAGTTCGTCTGCTTCAACAAGGGCCAGGCGCATATGCACTACCGTTGGCATAAAAATGTCACGTATCAGTGCCCACATTGTGAAAAGGAATTCAAAAAAGCGTCGACTCGGCTAACGCACATCAGGATAAAGCACCCGTCCACAAACATCTGCAATATGTGCGGACATAGCTTCGTCAGCGAAAATGGGCTGTACTGTCACAAGCAACTGGCGCATAGTACCGAGGAGCGTGAGGTGATGGAGGCGAGCGTGGCGGACCCGGACCACGCGCTGTTCTGCGCCGACTGCGACATACAGTTCCTCAACGAGGGCGCCTTCGCCACGCACCTGGGGAGCTCCAACAAGCACGCCACCACCAACCTGTCCATCGTGAagccggcgcggcggctggcgggcggcgaggccgcgcggcgccgcggccggccgCGCTCCTCCATACTCAAGTCCGAGGTCCTCAACAACGGCACCGTCACCTCCACCTGCTGCGACTTGTGTGGCGAGCACATGGCCAATGACGTGCAAGCACGCAAGCATTATGCAGAACAACATCCGGGGGCTGAGTTCCTGAAGCGATACATGTGTGATGTCTGCGGACATACCACCAAGCAATACGCGAACCTGATGGTGCACATGCGCACGCACACGAACGAGAAGCCGTACGAGTGCCCGCACTGCGACCGCCGGTTCAGCATGCCGAGCAACCGCGACCGCCATCTCGTGGTACACACCGGCGAGAAACGCTACCAGTGTCAACACTGCAACCGCCGCTTCACCCAGTCCACCGCCGTCAAGCTCCACATACAAACCGTGCACCTCAAGATCCCGTACAAGCCGTGGGAGAAGAAGAACAGGAAACGACGCAAGGAGGAGCCCATCCTCGGCCCCGTCAGCTCCGTCGCCGTCAGTACCATGGCCACGGCGATGTTGCCCCAGCATAAGTTGCTGTTAGAAGCTCAGGGGGACTATTTAAACGCGTTTATTAGCTATACCGATGAATAG
Protein Sequence: MLDLKACTVCFSTNVNLYNMDSGTLRHEYNLISGLKTTDCGGLPKYLCVECSAYIKRFVKFRKKCQRAHFTLRELQVRSKEISMHKLEAIDRKRLDLKPELSFIDINRTNYEEAYCQWTKTSRLGLYYGDIIPIIHHSTHTTQVIDMPEKLETESEHVKVEEDATEPVAPSLEHQDLEQSISIVKDADDTDYFDNDDNTSDHSEEPPPVKKPKLKGKSAKKLEPNGSSLDEEYASMVAISDREAQAAVDVYRLFSHGTFRCEVCNKGYHTQLRLTAHLRMHDQHVSGNFLCKLCNYYYKTEYLLKTHSTEKHMYKYECKKCTEVSFDRLSAKQHYIWAHLQKGRKKDANWYESRPKWLSSKGGKRVKGVVTIRPVRKINKLPPDFPVYSPVKHEEQYTLILARKTSRNYLEAEYKCELCYRGFRALNTYTKHMRKHDPAYAGAYSCDMCKLHFKSPRKVYRHMNITHLFQYSCQLCKFVCFNKGQAHMHYRWHKNVTYQCPHCEKEFKKASTRLTHIRIKHPSTNICNMCGHSFVSENGLYCHKQLAHSTEEREVMEASVADPDHALFCADCDIQFLNEGAFATHLGSSNKHATTNLSIVKPARRLAGGEAARRRGRPRSSILKSEVLNNGTVTSTCCDLCGEHMANDVQARKHYAEQHPGAEFLKRYMCDVCGHTTKQYANLMVHMRTHTNEKPYECPHCDRRFSMPSNRDRHLVVHTGEKRYQCQHCNRRFTQSTAVKLHIQTVHLKIPYKPWEKKNRKRRKEEPILGPVSSVAVSTMATAMLPQHKLLLEAQGDYLNAFISYTDE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00654718;
90% Identity: iTF_00656532; iTF_00654718; iTF_00657695; iTF_00290092; iTF_01072978;
80% Identity: -