Basic Information

Insect: Epinotia demarniana
Gene Symbol: Znf296
Assembly: GCA_945869435.1
Location: CAMBUM010000432.1:251079-261442[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.1 10 8.3 0.4 2 22 151 171 150 171 0.95

2 10 1.7e-05 0.0017 20.2 0.4 2 20 184 202 183 203 0.96

3 10 1.3 1.3e+02 4.8 0.4 5 23 249 267 246 267 0.88

4 10 0.2 19 7.4 0.3 2 20 346 364 346 368 0.88

5 10 4.3 4.2e+02 3.2 0.7 2 21 374 393 373 394 0.91

6 10 0.00076 0.074 15.0 1.0 1 23 402 425 402 425 0.95

7 10 7.1e-05 0.0069 18.2 5.5 1 23 446 468 446 468 0.98

8 10 2e-05 0.0019 20.0 4.6 1 23 475 497 475 497 0.98

9 10 1.7e-07 1.7e-05 26.5 2.3 3 23 511 531 509 531 0.96

10 10 4e-05 0.0039 19.0 3.2 1 23 537 559 537 559 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.1	10	8.3	0.4	2	22	151	171	150	171	0.95
2	10	1.7e-05	0.0017	20.2	0.4	2	20	184	202	183	203	0.96
3	10	1.3	1.3e+02	4.8	0.4	5	23	249	267	246	267	0.88
4	10	0.2	19	7.4	0.3	2	20	346	364	346	368	0.88
5	10	4.3	4.2e+02	3.2	0.7	2	21	374	393	373	394	0.91
6	10	0.00076	0.074	15.0	1.0	1	23	402	425	402	425	0.95
7	10	7.1e-05	0.0069	18.2	5.5	1	23	446	468	446	468	0.98
8	10	2e-05	0.0019	20.0	4.6	1	23	475	497	475	497	0.98
9	10	1.7e-07	1.7e-05	26.5	2.3	3	23	511	531	509	531	0.96
10	10	4e-05	0.0039	19.0	3.2	1	23	537	559	537	559	0.99

Sequence Information

Coding Sequence: ATGGCTTCGTCTATGACAGCTTTAAAATtaatcaaaaatatcaaaatagaaAATGTTTGTCGAACGTGCTTATCTAAAGAAATAGTATTACATTCATTATTCGATGTTTATTCTGGAACAATAACATTCGATTATCTTGTTAGTGCAATAACAGGCATAAAGATTGAACTAGGTGATGGCTTCCCATCAAATATATGCCAGCAGTGCAAGGACAAAGCCGTCACAGCATTTGATTTTAAGCAAAAGTCACATGAAGCCCATGCTGCACTGCAGACTCTTTACAACAAAGCTATCAATACAGCATCACAAGGTGTTAAAGAGGAACAACCCGCTGATGAGAATGATGATTGCCTCGACATTGACTTCTCTCTTCCGGTTACACCTGAAAATTATAGtgatatagCatcaataaaaaatgaaaatgaggGTGAGAGTAACAGTCAATGTCAACAATGTAAAAATTGCCTTCTTGAGTTTGATTCTCCACTTAAACTAAAAGAACATATGAAGAAATGTGTAAAAGTGGAGTTTGAAGAAGAGCAAGGCACATACTGTCCCCTTTGCGGCACTTGCTTTGAGAATGCAGATAATCTTACAAAACATATGTGGGCAAGTCATGCTGAACTTATGGGACCAAAGAAGAGAGGCAGACCAAAAAAGTTGCTGACCAGTACTATATTAAGTAAAATGACAGAAAATGGCTATCACACAAAATTTGGGCCGATTAAAACAAAGAGGTGTATATTTTGTAAGGATGAGTTTAAAACTAAGCAAGAATTGGGCATACACATGATGGAGcataaagGCACAAAGATACCATGTTGCATGCTTTGCAAGAAAATGTACCTCAACATCTTGAACTTTGATCAACATATCTGTTTTGATGATAGAAATAAttcaaacaaaatattaaatGAACATAAAACTTCAAATATGCAAAGCAACAATAGCAAAGCCCTTGACTATCTAACAGAAGTATCACTGCAGGAATTGTTAGACCCAAGCGGTGATATGGAGAATTTCAATGTTCTTGAAGTATGCAGCATCTGTAGCAGGGTGTTTTTATCGGAAGGACATTTGACTAGTCATAATGATGCCGAACACCCAGAACTTTCTCAGCGCTGCAACTTGTGTTgcaaggtatttgcATCTGTAAAATCTGCTGCCCGTCATAGGAATATCTGTAAGCAGATTGAAAGGAAACATATATGTAGCACCTGTGGCCTTAAATTTGCTTATGAAATATCACTGAACAAACACATATTGCGTTACCACGAGGGACAGAGTGTATCAGTTAAGTTTATGGATTCTAAAACGAAGTTAGACGAGAGGCAATATCAGTGTGACACTTGTAAAAGATGTTTTTATAGAAAGGACTTACTTGCCAGGCATACCAAACAGCACATGCCCAGTGAAAAACTATTTGAATGTGATGTATGCAAAAAGAAATTTCATAGAAGGGATAACTTGCGTTCTCACAAGCGGGTTCACGAGATCCATCGCGACAAAAATGCTAGCAGCAACTGCCTGTGTTTGTATTGCGGTCGCAGTTTTTCCAATTCGTCGAACCTGATCGTCCACATGCGGCGTCATACGGGCGAGAAACCTTACAAATGTGATTTTTGTGGCAAAGGTTTTCCGAGGTCGTCCGATCTGCAATGCCATAGACGGTCACATACAGGAGAGAAGCCATGTATCTGCGTGGTTTGTGGGAAAGAACGCAAACCCATTTTACCAGAGCAGTACAAATGCTTCACTAGAGAAGTTCCCTTTGTTAAATTATCAGCCACCATATTGCACCCGTTCACAAATACAAAATTGACTTTAGATTTAACAACACACTCTCTGAGAAAATGCAGACGAATGTCTATATGCTTAGTCTTCGGTTTGTAA
Protein Sequence: MASSMTALKLIKNIKIENVCRTCLSKEIVLHSLFDVYSGTITFDYLVSAITGIKIELGDGFPSNICQQCKDKAVTAFDFKQKSHEAHAALQTLYNKAINTASQGVKEEQPADENDDCLDIDFSLPVTPENYSDIASIKNENEGESNSQCQQCKNCLLEFDSPLKLKEHMKKCVKVEFEEEQGTYCPLCGTCFENADNLTKHMWASHAELMGPKKRGRPKKLLTSTILSKMTENGYHTKFGPIKTKRCIFCKDEFKTKQELGIHMMEHKGTKIPCCMLCKKMYLNILNFDQHICFDDRNNSNKILNEHKTSNMQSNNSKALDYLTEVSLQELLDPSGDMENFNVLEVCSICSRVFLSEGHLTSHNDAEHPELSQRCNLCCKVFASVKSAARHRNICKQIERKHICSTCGLKFAYEISLNKHILRYHEGQSVSVKFMDSKTKLDERQYQCDTCKRCFYRKDLLARHTKQHMPSEKLFECDVCKKKFHRRDNLRSHKRVHEIHRDKNASSNCLCLYCGRSFSNSSNLIVHMRRHTGEKPYKCDFCGKGFPRSSDLQCHRRSHTGEKPCICVVCGKERKPILPEQYKCFTREVPFVKLSATILHPFTNTKLTLDLTTHSLRKCRRMSICLVFGL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00412874;
90% Identity: iTF_00660699;
80% Identity: -