Basic Information

Insect: Epinotia demarniana
Gene Symbol: -
Assembly: GCA_945869435.1
Location: CAMBUM010000500.1:311307-326833[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0062 0.61 12.1 0.6 1 23 218 241 218 241 0.96

2 10 6.4e-06 0.00062 21.5 0.1 1 23 248 270 248 270 0.98

3 10 1.6 1.6e+02 4.5 0.4 1 23 274 297 274 297 0.92

4 10 0.14 14 7.9 0.4 2 23 306 328 305 328 0.95

5 10 1.9e-06 0.00018 23.2 0.3 2 23 331 353 330 353 0.96

6 10 0.00026 0.025 16.5 0.8 1 23 359 381 359 381 0.98

7 10 0.00022 0.021 16.7 3.7 1 23 420 443 420 443 0.91

8 10 0.021 2 10.5 2.0 1 23 449 472 449 472 0.97

9 10 0.00037 0.036 16.0 1.3 1 23 480 502 480 502 0.96

10 10 0.005 0.48 12.4 1.2 1 23 508 531 508 531 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0062	0.61	12.1	0.6	1	23	218	241	218	241	0.96
2	10	6.4e-06	0.00062	21.5	0.1	1	23	248	270	248	270	0.98
3	10	1.6	1.6e+02	4.5	0.4	1	23	274	297	274	297	0.92
4	10	0.14	14	7.9	0.4	2	23	306	328	305	328	0.95
5	10	1.9e-06	0.00018	23.2	0.3	2	23	331	353	330	353	0.96
6	10	0.00026	0.025	16.5	0.8	1	23	359	381	359	381	0.98
7	10	0.00022	0.021	16.7	3.7	1	23	420	443	420	443	0.91
8	10	0.021	2	10.5	2.0	1	23	449	472	449	472	0.97
9	10	0.00037	0.036	16.0	1.3	1	23	480	502	480	502	0.96
10	10	0.005	0.48	12.4	1.2	1	23	508	531	508	531	0.95

Sequence Information

Coding Sequence: ATGGTTGAAAGCATGGACAACAAACTAATTGTTTGTCAGGCATGTCTAAGCACTAACCGGGATCTATATCCCATTCGGAAATTACAGGATCTTATAATGAATGTGGACTTGGGTGGTTTAAATCTGAATTTTCAAGGGGGTCTTTGCTGGGAATGTAAAAGAATCATCTTGAAATTTTCGACGTTCAGAAAGCAAGCTGAGGTAGCTCAAAGTTCATTGCAGAAACTAGAAAAGTTACAGAGTCTAAAAAGCCTCAGCTCCCTGTCTTCCACCGTGTCTAGCAGTTACAGCTACCCTGCTTCACCTGATCCCCTCAACTCGGAAACCATAGACAACCCAAAACAGATAAAACAAGAAACAGAGGATACCATAGACAATTCTGATGGTGACTACGATGAGAAACCGGCATGCGAACTGGATATTGATATACAAgagaatgaaattaaaaaagaaggtgtaaaaaagaaaatcaaaaaactagtaaatCAAAAGAGTAAAGTAAAAAAGCTAGCTAGTAGTAGAAGGAAAGAAAAAACAACAGATAGTTATAATAATGTTAAAGATATATTCATACAAGTGGAGTTTACAGAAGAAGAGCTGGTGAAAAGCAGAGAAGAGAAGAGAAGCCATCCGAACTTCAAGAAGTTGCCATATAACTGCGACAGCTGTGTGCTCGGGTTCACTAGGAAGGAGAATTACGATGTGCATATGGAAAAGAAACACAACACGAGTATTGGACGCTACATGTGTCCAGTATGCCAAGTCCGCTTCACCAGCCCCGCTACCCTAGCAAAACATGTCAGAAAACACTACCACTTCTATCGATGTAAACTCTGCTCGTATGAGACTTCGGAGCTCTGGTCGGCCCTGAGCCACGCTCGGAGCAAGCACAGGGGCGATACAGAGGGCTGTATACATTGCAGACAGTGTAACTATGTTGCCAAGGATCGAGAGGAGCTGGCCGGGCACACAAAGATGGCGCACTCGCTCGTCTGTGACGAGTGCGGGGAGAAATTCAAAGGGCGCGACTCGCTCAAGTCACACATGCGcCGTATCCACAGCACAGTCCGCGAGCACAAATGCGACTCGTGCCCGCGCGCGTTCCGCTCTCGCGGGCGACTAGAGGCGCACACAGCGACacacggcgcggcggccgcggcgcgacTGGCCTACTGTGTGCTCTGCAGGGTGCAGTACAAGAACCTGTACGTGTATAGGAACCATCTGGCTACCAGCGCGAACCACAGCGAGAGACGGTACCACTGCGAGGAGTGTGGTAAAAAGTTCGCGTCCAAAGTATACTACAAGCGTCATTATGCGTTTTATCACCAAAAGGAGTCCAAGTTTAAATGCGAACTCTGCGACCGGCTGTTCATATCGGACTGGCGGCTGCGGCACCACCGGCAGGTGCGgcacggcgccgcgcgcgcacgGACCCACGCGTGCGACCAGTGCGGAAACAAATTCTACACGGGGTCAACGCTCAGGGCGCACCAGCTGACGCATTCCTCGCATCGGTCCTTCATGTGCGCCCACTGTGGAGACACCTTCAAGCAGCGCCCGGCCTTGTACACGCACACTAAACTGGTGCACAGGGGGCTTAAGAGACAACCCACCACTTAA
Protein Sequence: MVESMDNKLIVCQACLSTNRDLYPIRKLQDLIMNVDLGGLNLNFQGGLCWECKRIILKFSTFRKQAEVAQSSLQKLEKLQSLKSLSSLSSTVSSSYSYPASPDPLNSETIDNPKQIKQETEDTIDNSDGDYDEKPACELDIDIQENEIKKEGVKKKIKKLVNQKSKVKKLASSRRKEKTTDSYNNVKDIFIQVEFTEEELVKSREEKRSHPNFKKLPYNCDSCVLGFTRKENYDVHMEKKHNTSIGRYMCPVCQVRFTSPATLAKHVRKHYHFYRCKLCSYETSELWSALSHARSKHRGDTEGCIHCRQCNYVAKDREELAGHTKMAHSLVCDECGEKFKGRDSLKSHMRRIHSTVREHKCDSCPRAFRSRGRLEAHTATHGAAAAARLAYCVLCRVQYKNLYVYRNHLATSANHSERRYHCEECGKKFASKVYYKRHYAFYHQKESKFKCELCDRLFISDWRLRHHRQVRHGAARARTHACDQCGNKFYTGSTLRAHQLTHSSHRSFMCAHCGDTFKQRPALYTHTKLVHRGLKRQPTT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00659734;
90% Identity: iTF_00656456;
80% Identity: -