Basic Information

Insect: Epinotia demarniana
Gene Symbol: -
Assembly: GCA_945869435.1
Location: CAMBUM010000057.1:166108-178271[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 9.3e-07 9.1e-05 24.2 2.1 1 23 443 465 443 465 0.98

2 7 5e-06 0.00048 21.9 0.3 3 23 475 495 474 495 0.97

3 7 1.1e-05 0.0011 20.8 0.8 1 23 501 523 501 523 0.99

4 7 1.5e-06 0.00015 23.5 3.0 1 23 529 551 529 551 0.98

5 7 2.6e-06 0.00025 22.8 1.2 1 23 557 579 557 579 0.97

6 7 1.6e-05 0.0015 20.3 6.4 1 23 585 607 585 607 0.97

7 7 0.00092 0.09 14.7 1.1 1 21 613 633 613 634 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	9.3e-07	9.1e-05	24.2	2.1	1	23	443	465	443	465	0.98
2	7	5e-06	0.00048	21.9	0.3	3	23	475	495	474	495	0.97
3	7	1.1e-05	0.0011	20.8	0.8	1	23	501	523	501	523	0.99
4	7	1.5e-06	0.00015	23.5	3.0	1	23	529	551	529	551	0.98
5	7	2.6e-06	0.00025	22.8	1.2	1	23	557	579	557	579	0.97
6	7	1.6e-05	0.0015	20.3	6.4	1	23	585	607	585	607	0.97
7	7	0.00092	0.09	14.7	1.1	1	21	613	633	613	634	0.94

Sequence Information

Coding Sequence: ATGTGTGAGTGGCTGTTGCGCGACGAGTGGTGCGACGTGAGCCTGCTGTGCGGGGGGCGCGAGTTCGCTGCCCACCGCGCTGTCCTCGCCAGCGTGAGCAGCTTTCTTAGGGGAATCCTGCTTTCTTGCCCTATAGAAGAAACGCCGACGTTAATTGTCATGCCCGACTTCGACTTAGAAGCGCTGTCGGCTGTCCTTTATTACATTTATAACGGAGAAGTGACAATGCCGAAACAAAAGCTGGGGAAGTTTTTAGATATCGTGAAAGCCATGCAGATTTTCATCGACCGACAATACTTGACGCAACTCTCGATAAATATTGACGTGGATTACAATGTAAACAAAAGCGTAGCGGATGACGATCGCAAATTCGTTTTACGATCAGAAAACGATAATGACTCGCCGCTGATAACGTTTAGAAAACTATTTCAACATACGTTTCCACGCAATACAAAAGATGGGACAGATTATAAAGACTGTATGCAGTCTCGGAATTTGAATGAACAGTTTAAGCCTGTTTTGGGAAATCTGCCATCGGCGCATGGAGACCGACAAAGAGACTATTTTCTACGTGATTCATTTATGGAGACATATCCTCGAAACAGTAATGCTAACGGTCGGGCGGGCGTGCCAGCAATACGAAACGGATGCTATCGTTCCCCGACATCTATGCTCTTGACGAATGCAAATGTGAATGGCTATAGCCCTGACATGGCGAATTTGCCATCCGATAACGCAGCTAGTCAAATATCTTATAATTTAGCTTCTAATTTATTAAAGCCTTACCAGGATAATAAGGCAATGATGGAGAATCACAGAACGGAGCACGTTCCATTGGGGCAGTCTACAGGAATTTCTGTGGAGTCTTTTCGAAGCAGTAAGACATATTCGCCTAATTTAGATTTCGTTAGAATACAGAGAGCCCATACAGCTAAGCCGCCAGTTGCCATTAATAAGGTGCTAATAGACAGATTAGCATCGTTTTCTAAATTAGATAGTAACACGGAGCATAAAGCCGAAAGATCTATAGGCAATAATATGCCAGCTACTGGTCAAAATAAAGTAGCAATTTTAAATAAAGCCCTAGAAAGTCCTTGGTGCCCTCGATATCCTGACAGCTTCAGACCCTTCCGCAGAAAAGAACCAATTTTATACAATGTTACTCCGAATGATAATAACAACAACATCCGAGTCAAGACTGAACCTTTGGAAAGTCCAACTGATCTACGAAATAGCAGCCATTTGGTTCTTACGGCCTCGACAGTTGACGATGACAAGGACCCTGGTTACAGTCAGCAATCGACTACGGAAGTGACCCGCGGCCGCTACAACTGCAACGAATGTGGGAAGACATTTTCCCAGCTACGCAATTTCAAGTACCACATGTCTGTGCACCGTGGTACCCGCGAGTTTGCGGCCTCCTGCGCCGTGTGTGGGAAAAGCTTCAACGACCGCGGATACCTTAGTAGCCACATGAAGATACATAAAAACCGCAAAGAGTATAAATGCTCGCAATGCCCCAAGTCGTTCAACCAGCGCGTCGCGTACAACATGCATGTGCGCATTCACACAGGTGTCAAACCTCATGTATGCCCCACATGCAGCAAGGCGTTTTCGCGAAAAATGCTTCTAAAGCAGCATCAGCGCACTCACTCCGGCGAACGTCCCTATGCCTGCCCACACTGCGAGAAACGCTTCGCAGATCGTTCCAACATGACGCTACACCTGCGGCTTCATACAGGCGTGAAGCCTTTCAAGTGCCCGATGTGCCCCAAATCGTTTACAAAGAAGCATCACCTGAAGTCACACGTGAACTTCCACACCGGGGCCAAGCCGTATTCCTGCCCTCGATGCCGACTGGCCTTCACACAGTCTTCCAATATGAGGACTCATTTCAAGAGGTGCACTGCTCCGGAACCTACTGATGTAGCTGCGGAGAATTCTACATGA
Protein Sequence: MCEWLLRDEWCDVSLLCGGREFAAHRAVLASVSSFLRGILLSCPIEETPTLIVMPDFDLEALSAVLYYIYNGEVTMPKQKLGKFLDIVKAMQIFIDRQYLTQLSINIDVDYNVNKSVADDDRKFVLRSENDNDSPLITFRKLFQHTFPRNTKDGTDYKDCMQSRNLNEQFKPVLGNLPSAHGDRQRDYFLRDSFMETYPRNSNANGRAGVPAIRNGCYRSPTSMLLTNANVNGYSPDMANLPSDNAASQISYNLASNLLKPYQDNKAMMENHRTEHVPLGQSTGISVESFRSSKTYSPNLDFVRIQRAHTAKPPVAINKVLIDRLASFSKLDSNTEHKAERSIGNNMPATGQNKVAILNKALESPWCPRYPDSFRPFRRKEPILYNVTPNDNNNNIRVKTEPLESPTDLRNSSHLVLTASTVDDDKDPGYSQQSTTEVTRGRYNCNECGKTFSQLRNFKYHMSVHRGTREFAASCAVCGKSFNDRGYLSSHMKIHKNRKEYKCSQCPKSFNQRVAYNMHVRIHTGVKPHVCPTCSKAFSRKMLLKQHQRTHSGERPYACPHCEKRFADRSNMTLHLRLHTGVKPFKCPMCPKSFTKKHHLKSHVNFHTGAKPYSCPRCRLAFTQSSNMRTHFKRCTAPEPTDVAAENST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00658566; iTF_00657534; iTF_00657370;
90% Identity: iTF_00658566;
80% Identity: iTF_00658566;