Edem040026.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Epinotia demarniana
Gene Symbol
Zfy1
Assembly
GCA_945869435.1
Location
CAMBUM010000920.1:382954-390131[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 24 1.8 1.7e+02 4.4 1.2 2 10 117 125 116 137 0.83
2 24 0.011 1.1 11.3 0.9 2 23 168 190 167 190 0.95
3 24 0.0028 0.27 13.2 4.2 1 23 195 218 195 218 0.96
4 24 0.17 16 7.6 2.2 3 21 223 241 222 242 0.93
5 24 0.00025 0.024 16.5 0.1 1 23 253 276 253 276 0.94
6 24 0.00026 0.026 16.4 4.6 1 23 283 305 283 305 0.97
7 24 0.0048 0.46 12.5 0.6 1 23 312 334 312 334 0.98
8 24 0.00077 0.075 15.0 0.3 1 20 353 372 353 374 0.95
9 24 0.00056 0.054 15.4 0.3 2 21 473 492 472 493 0.94
10 24 0.013 1.3 11.1 0.9 3 23 526 546 525 547 0.95
11 24 0.0023 0.22 13.5 0.1 3 23 554 574 552 574 0.96
12 24 7.6 7.4e+02 2.4 8.1 1 22 577 598 577 598 0.94
13 24 0.00037 0.036 16.0 1.4 1 23 610 633 610 633 0.95
14 24 0.00015 0.014 17.2 0.5 1 23 639 661 639 661 0.96
15 24 4.3 4.2e+02 3.2 0.5 1 23 695 718 695 718 0.87
16 24 0.00023 0.023 16.6 1.4 2 21 845 864 844 865 0.92
17 24 0.041 4 9.6 0.1 1 23 898 921 898 921 0.94
18 24 7.8e-05 0.0076 18.1 0.4 2 23 926 947 925 947 0.96
19 24 1.3 1.3e+02 4.8 1.5 2 21 951 970 951 971 0.91
20 24 1.4e-05 0.0014 20.5 1.0 1 23 997 1020 997 1020 0.95
21 24 0.0021 0.2 13.6 0.4 1 23 1026 1048 1026 1048 0.92
22 24 1.9 1.8e+02 4.3 0.1 3 23 1056 1076 1054 1076 0.97
23 24 0.24 23 7.1 1.8 1 23 1082 1105 1082 1105 0.94
24 24 0.017 1.7 10.7 2.6 2 23 1112 1134 1111 1134 0.95

Sequence Information

Coding Sequence
ATGGAGACCTCAGAATTGCTGCCAAACAAGATCTGTGGGGTCTGCGCCAACAAAATTAATCCCACTATCCACCTCATCGGATACCTGAGAGATGCGCATAGGAAATGGAACGAGGCCTCCGACTACCTTAACCAACTGGAGTTTAAGGAGAACGTTAAGACAGCTTACATAGTCGTGGACAATGATGTGACAGACATCACGGTTTGCACGGAGAACGTGAGAAGGTCGGACTGCGCCGAAAAGGACGTGTATAAAAGCTTCAAAAAGCGGAAGAGCCAACAGAACGCTGTCAAAAGACGGAACGAACTGGAGAGACGGCTTCGGGACTCTGAAATAAGCACTAGTTTGAAATGCCCGGAGTGCGAAAAATCTTTTCTCTGTGTATACAAGTATAACATGCACATGAGGTATTACGATAAACGCGCGTGCGTCCATTGCAGGGAAATGATAAAATTAGAGGAATTGAAAGATCATTATGCTGAGCATGGCGTGGATACTATGCAGTGTGACATTTGCTTCGAGACTTTTAAGAAGCTGGACGCCTTTTTGAAGCACAAGGTCACCTACCACAGCAAGGGACCGTATTTCTGCTACATTTGCAAGCTTTCGTACAGAGACCCTCATCATCTAGCTTCGCATATGACGAGCAAGCATGAGCCAAGAATCTGCCTCGGCTGCGACCGGAAATTCTCTAACGTTTACTGCTTCAGAACGCACTCTAGACGGTGCAAGAATTCCCAAAGGAAAGGCGGTGTGTTCATCTGCGATATCTGTGCTAAGGTGTACAGCTCTAAATACGCTCTAAAGGTCCATTTAGAGTATATACATATGAATAAGGAGCATTCGCACCAGTGCGAGCATTGTGGGAAGGTTTTCAACAGCGCGATTCATCTTTCGGAGCATAGCAATAAACACAATAAGGTCCCTGATAGGTTTGTTTGCAATATTTGCGGTGTGCCTATGAGCACTCGTCGAGGGTATCAGAGACATTACAAGAGACATCTAAAAAACCCTAACTACAAACCTAGGGCTAAGAATACGTCTAAAGCTAACAAGTATGAGTGCGAATTTTGCGGAGAAAAGTTCAATCTTAAAACGCATTTGAGGGAGCATATCGCCGAGGACGCTGGCTTGCCTCAAGGCCTCTGCAGGGCGTGCTCCGAAGACACCATAGCCGCCGCCCACTTCAGACAACTCACCTCCGTCTCGCATCATCACTGGAACAATGCCGTCGACTCCCTCACCTGCATACACGACCCCGAAGACGACATCAGGACTTACTACGTATTCTACAGCGACAGCGAAATGCTCATAAGGGAGGAGCCGAAAACCATCTCTAAAGACGAGGTGGTTGTCCATCTGAACGAAAAGAGGACCAAACCCAAGAGATCCTACACGAAATCGGCAGGGAAGTGCCAGTGTCCGGACTGCTATAAAGAGTTCCCTGTGGCTTACAATCTGAACGTGCATTTGAAGAACACGATGAAGCGGGCTTGTATCAGATGCGGAACTGTTTTGGAAAGAGAAAAACTAGCGGATCATCTGGCGAAAGTCCATGGGAAACTCTACGCGGATTGCGACATCTGTTTCAAACTGTTTGACGACGAAGATCTACTTAAACAGCACTACGTCACGCATCACAGCCGCTGCTCCTTCGGCTGTCAGATTTGCGGGCGCGGCTACACGAACGACAGAGCTCTTAGGGCTCACATGTATGCTCACACCCTGTTCCACTGCATGTCTTGCAACATGAGCTTCGAGAACCGACGCTGCTACAAACACCATCAGAAGAAATGCAAGTCCGCGCAAGTTCCTACCGCGACAACGTTCACCTGCGATTACTGTGGGCACGTCTATAACAAGAAACCATCGCTCCGCATCCATATTATACAGAAACACTTAAACGTCCTTCCATATGTGTGCGAAACGTGTGGCAAGCGGACCTCTACGCTAGCACATTTAAGGTCCCACGAAGCGATACACACTACAGAACGGAAGCTGTATAAATGTGCATGTGGCGCTGAGATGCGGACAGAGCTAGGGTATCACTTGCATCAACGGATCCATACTGGGGAAAAGCCATATGAATGCCAAGAATGCGGTGACAGGTTCCTGTCAGCTTCTAGACGCTTAGATCACATCAAAAGAAGACACAGGAGTACTAAAGACATGCCCCATGGGTGTGATATGTGCCAAGCTCGTTTCATAATAGACGAATCGCTCTGCCCGAGCGGCGTGTGCGCAACATGCACCGCCAACGCCATCGCCGCCCAAGAGTTCCGCACCCTAGTCGCCGACTCCATCAAATTATGGTCCTTCGCCATTAAACAACTCGAAATCATACCTCTCAACAACTCGCCCTCTGTCAAATCCCTCTGCGCCTTCCTGAGATCAGACAACCTCAACATCCAGGTCGCTAAGGACTATTCCGTGAACGAAAAAACCACTCCTCTGCACAGGCTAAAGACTCGGATGAATAGGAAGAAGAGTGATGAGAGAAAGCCAAGGGTACACAGAGCGGGACCTCCCTGCAAATGCACGGATTGTGGCAAAGAGTTCATCAGCCCGTACTACCTCAATGTGCACTTCAAGAACAGCGGTCAGAAAGACGCTTGCATCACATGCGGAGCTATTTTCCTCAGAGGCAAACAGATGAGGGATCATCTAGTCAAAGTGCATAGGGAAACGGCTTTCTTGTGCAAAGAGTGCCCAGCTATATTCAATAATGAAGCTGATGCGAAGAAACATGAAAAGAAGGCGCATAAGACTGGACTCACTTGTGGTGATTGCGGGCGGACGTTCGTGAGGAACGCCTCGTTTGAGACACATTCGCAAATGCACGCTGTCCGGACGTGTAGAGCCTGTGGTATACAGTTCACCAATCGAGCGTGCTATAGAGAGCATAGATCAAAGTGCGAGCCAGATGCGAAACCTGACAGGGACACCGTACCTCGAAACAGACGGTCTAACATCCGCGATCCGGCAACGTTTACCTGTGATTACTGCAAGAAGACTTATACGTCCCGTCCTCAACTGAAGAACCACATCCTCTGGATCCATATGGACGTCCGTCCCCATCAGTGCCAGTGGTGCGGAAAGCGTTTCTACACGCCAGCTCGCCTAGCGGAACACAGCGTGGTCCACACGCGGGAGCGGAACTTTGGCTGTGATATCTGCGGAGCGAAGTTAGTCTCCAAAATGGCGGCCGTGTACCACAGACGCCGGCATACCGGAGAAAAGCCATATCGCTGCGAAGACTGCGGAGACTGCTTCATATCTGCCTCGAGGAGGTCTGAGCACGCTAAGAGAAAGCACGGGAAGGGGCCACGACTGCACTGCACTAGGTGCCCGTCGAGTTTCGTCAGGATTCATGAGTTGAAGAAGCATATTGAGAAAGCACATAGTCATGTCGTTCCCATATATGCGGTGGATGATTCTAATTAA
Protein Sequence
METSELLPNKICGVCANKINPTIHLIGYLRDAHRKWNEASDYLNQLEFKENVKTAYIVVDNDVTDITVCTENVRRSDCAEKDVYKSFKKRKSQQNAVKRRNELERRLRDSEISTSLKCPECEKSFLCVYKYNMHMRYYDKRACVHCREMIKLEELKDHYAEHGVDTMQCDICFETFKKLDAFLKHKVTYHSKGPYFCYICKLSYRDPHHLASHMTSKHEPRICLGCDRKFSNVYCFRTHSRRCKNSQRKGGVFICDICAKVYSSKYALKVHLEYIHMNKEHSHQCEHCGKVFNSAIHLSEHSNKHNKVPDRFVCNICGVPMSTRRGYQRHYKRHLKNPNYKPRAKNTSKANKYECEFCGEKFNLKTHLREHIAEDAGLPQGLCRACSEDTIAAAHFRQLTSVSHHHWNNAVDSLTCIHDPEDDIRTYYVFYSDSEMLIREEPKTISKDEVVVHLNEKRTKPKRSYTKSAGKCQCPDCYKEFPVAYNLNVHLKNTMKRACIRCGTVLEREKLADHLAKVHGKLYADCDICFKLFDDEDLLKQHYVTHHSRCSFGCQICGRGYTNDRALRAHMYAHTLFHCMSCNMSFENRRCYKHHQKKCKSAQVPTATTFTCDYCGHVYNKKPSLRIHIIQKHLNVLPYVCETCGKRTSTLAHLRSHEAIHTTERKLYKCACGAEMRTELGYHLHQRIHTGEKPYECQECGDRFLSASRRLDHIKRRHRSTKDMPHGCDMCQARFIIDESLCPSGVCATCTANAIAAQEFRTLVADSIKLWSFAIKQLEIIPLNNSPSVKSLCAFLRSDNLNIQVAKDYSVNEKTTPLHRLKTRMNRKKSDERKPRVHRAGPPCKCTDCGKEFISPYYLNVHFKNSGQKDACITCGAIFLRGKQMRDHLVKVHRETAFLCKECPAIFNNEADAKKHEKKAHKTGLTCGDCGRTFVRNASFETHSQMHAVRTCRACGIQFTNRACYREHRSKCEPDAKPDRDTVPRNRRSNIRDPATFTCDYCKKTYTSRPQLKNHILWIHMDVRPHQCQWCGKRFYTPARLAEHSVVHTRERNFGCDICGAKLVSKMAAVYHRRRHTGEKPYRCEDCGDCFISASRRSEHAKRKHGKGPRLHCTRCPSSFVRIHELKKHIEKAHSHVVPIYAVDDSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00148679; iTF_00654557;
90% Identity
-
80% Identity
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