Basic Information

Insect: Epinotia demarniana
Gene Symbol: -
Assembly: GCA_945869435.1
Location: CAMBUM010000864.1:44422-49275[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 7.2 7e+02 2.5 0.2 3 19 61 77 60 79 0.92

2 13 1.9e-06 0.00019 23.2 4.9 1 23 145 167 145 167 0.99

3 13 0.0045 0.44 12.6 4.7 1 23 172 194 172 194 0.97

4 13 0.00031 0.03 16.2 1.4 1 23 212 234 212 234 0.99

5 13 0.00059 0.058 15.3 3.8 2 20 242 260 241 263 0.93

6 13 0.00025 0.024 16.5 0.6 1 23 269 291 269 291 0.95

7 13 4.3e-05 0.0042 18.9 2.9 1 23 297 319 297 319 0.97

8 13 5.2e-06 0.0005 21.8 1.1 3 23 327 347 326 347 0.99

9 13 1.7e-05 0.0017 20.2 0.4 1 23 353 375 353 375 0.97

10 13 2.8e-05 0.0027 19.5 0.6 1 23 381 403 381 403 0.98

11 13 1.4e-05 0.0014 20.5 5.2 1 23 409 431 409 431 0.98

12 13 4.7e-08 4.6e-06 28.2 0.6 1 23 437 459 437 459 0.99

13 13 4.3e-05 0.0042 18.9 2.6 1 23 465 487 465 487 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	7.2	7e+02	2.5	0.2	3	19	61	77	60	79	0.92
2	13	1.9e-06	0.00019	23.2	4.9	1	23	145	167	145	167	0.99
3	13	0.0045	0.44	12.6	4.7	1	23	172	194	172	194	0.97
4	13	0.00031	0.03	16.2	1.4	1	23	212	234	212	234	0.99
5	13	0.00059	0.058	15.3	3.8	2	20	242	260	241	263	0.93
6	13	0.00025	0.024	16.5	0.6	1	23	269	291	269	291	0.95
7	13	4.3e-05	0.0042	18.9	2.9	1	23	297	319	297	319	0.97
8	13	5.2e-06	0.0005	21.8	1.1	3	23	327	347	326	347	0.99
9	13	1.7e-05	0.0017	20.2	0.4	1	23	353	375	353	375	0.97
10	13	2.8e-05	0.0027	19.5	0.6	1	23	381	403	381	403	0.98
11	13	1.4e-05	0.0014	20.5	5.2	1	23	409	431	409	431	0.98
12	13	4.7e-08	4.6e-06	28.2	0.6	1	23	437	459	437	459	0.99
13	13	4.3e-05	0.0042	18.9	2.6	1	23	465	487	465	487	0.98

Sequence Information

Coding Sequence: ATGGCTTCGGTTATCCATACAACAATGTATGAACACTGTTGTCGAACCTGCTTGACCAACGATTCGTCAAATAAAATGATGGATATTTTCACTCCTACTAATACAGCGAGTCCAGCTGATATATTAACGTCTTGTACATCAATCAAGATAAACAGTGAAGATGCATTGCCAAAAAATATTTGTGATAGCTGTTATAGATCTTTAAGAGAGTTTTATGAATTTAGAAAACATGCTGAAGAAATCGATGAAAGATTACGCAATAATGAAACAGAAGATTACATAATCGAAATAAAACTTGAAGAACCTCCACTTGATGATATTAAACAAGAATCCAATGAAGAGCTTGATAATGATCAAAAATCTTCATATGAATATTCTGAATCTGTCCATGAACTGTCAAATTTACCGCAACCACCAAgtttaagtacattttttaaatgtaatgaATGTGACAAGAagtttaaaaaggagtctaaaTTAAAGAGGCATAATCGCACACATGAGAATGTTCCATACACTTGTAATCTATGTTCGGAAACATTTATACACCATTCCAAATATGTAAAGCACCTGATCCAACACAACCAAAGTGTTGAACAAAGTGAAGTGATAGACCAAAATGAAAACCAAAGCTTTAAATGCAGTACATGCTCCGCAGTATTCAAGTCCATGCAGTCACTATCCGGCCACATGCGCAAACACAGTAACAAAGACCGTATTTTAAGCTGCTCAGTGTGCGACAAAGTATTTAAGAAAATAAGTCATTTGAAACGGCATGAGCTTTGCCACGAATTGAACAGGCCTTACAAATGTTCTGTTTGTCCTAAGTCTTTCACATCAGAGATCCTTTACAAAGAGCATGGAGACAAGCATGCAGGTGTTAAAAGTCACATATGCCCGTTTTGCTCAAAAGGATTTTCATACTTCTCGACATTGAACACACATATTAAGACACATACGAAAGATAAGACACTGTTGTGTCCGTTTTGCGGGAAAAAGTTTGATTCTGGTACGAATCTGACTCAGCATATGAGGAGGCATATGGGGCTGAAACCGTTTGCTTGTGATTTGTGCCCCAAACGATTTGTTAGCAAAGGTGAGCTCAACTCCCACACGACTACGCACACGGGCGAGCGAGCGTACACTTGCGAGCAGTGCGGCGCCACGTTCACGAAGCGCAGCTCGCTGGGGAAGCACGCGCTGCGGCACCGTGGGATCAAACCGCACCAGTGCGATGCCTGCCCCAGGAAATTCACAAGCAAGGATCATTTGAAGCGGCACTACCGCATCCACACCGGAGAGAAGCCTTACCGCTGCCCGCAGTGTGACCGCGCCTTTACGCAGAGCAACGATCTGGCGAAGCATCTGCGCACGCATCTTGGCAATATGCTTTACAAATGCTCCCAGTGTTCCGAGAGTTTCCGTCTGAAAACCCAGCTACAGCAACACATGTCACAGCACTTCGCGTCACAAATGACCTCCGCAGCCCTAGAACCGAAGGAGAAACATGACTATATGGAGATCATGAATGCGGCGAAATGTGATACtttattacaaattaataaGTGA
Protein Sequence: MASVIHTTMYEHCCRTCLTNDSSNKMMDIFTPTNTASPADILTSCTSIKINSEDALPKNICDSCYRSLREFYEFRKHAEEIDERLRNNETEDYIIEIKLEEPPLDDIKQESNEELDNDQKSSYEYSESVHELSNLPQPPSLSTFFKCNECDKKFKKESKLKRHNRTHENVPYTCNLCSETFIHHSKYVKHLIQHNQSVEQSEVIDQNENQSFKCSTCSAVFKSMQSLSGHMRKHSNKDRILSCSVCDKVFKKISHLKRHELCHELNRPYKCSVCPKSFTSEILYKEHGDKHAGVKSHICPFCSKGFSYFSTLNTHIKTHTKDKTLLCPFCGKKFDSGTNLTQHMRRHMGLKPFACDLCPKRFVSKGELNSHTTTHTGERAYTCEQCGATFTKRSSLGKHALRHRGIKPHQCDACPRKFTSKDHLKRHYRIHTGEKPYRCPQCDRAFTQSNDLAKHLRTHLGNMLYKCSQCSESFRLKTQLQQHMSQHFASQMTSAALEPKEKHDYMEIMNAAKCDTLLQINK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -