Edem013916.1
Basic Information
- Insect
- Epinotia demarniana
- Gene Symbol
- Jarid2
- Assembly
- GCA_945869435.1
- Location
- CAMBUM010000225.1:70626-90674[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.2e-18 6.8e-14 53.5 0.0 7 88 208 286 204 287 0.89 2 2 4.6 3.4e+04 -3.2 0.0 36 61 366 372 352 398 0.52
Sequence Information
- Coding Sequence
- ATGCGGTTGCACGCTGACTCCGATCATGAGCGGTTTCTCGCCAATCGCCAGGTTGGAGCTCGCGATGAGGGAGACCAACCGCATCAACCCGCCGAGGTCCGGCGCGACCGTCCGGACGTACAACAGATAAAACCGACCAAGCAGCAGGACAACGGCCCGGAGTGCGTGAGCGCGAGCCTTATTCCCAAGGAGGAAATCAGCATTCAGAAAAAACAGAACCTGCTTGAGAACCTATCCACCAGCCCTGCGCTGCTGAACAAATTCTTTAACCGCCTGACCTCCGATATGCAGGATAAATTTAACCTGATATTGGCAGAAGAGTTAAATGACGAAGCGTCGACATCTGCGAGTAAAGAGCCTCCCTCTTCAATGTATTTGGACCATAAGGCGGGGTCGGTGCTAGAGGCTCTCACGTTCTACCCGACCGCCGAGGAATTCGCGGATCCTATATCGTACTACGACAAAATCGCCCCTCAAGCCTCCATGCACGGACTCTGCAAGATAGTCCCCCCGGAGGGCTTCAAGCCCCCGTGCAACATGAGCGACACAATCCGCTTCGCCGTGATATACCAGTACATCTCCAAGATGTACAGTCGGTGGGGACCGGTCTCTAGGGAGCTGGCGGCCATCAAGGCGCACCTGCGGACGCAGAGCGTCGTGTTCGCGCGGTCTCCCCTCTTGGACGGCAGCGAAGTGAACCTGCCCAAGCTGTACCACGCGGTGGAGCGCAACGGCGGGCTCAGCCAAGTGATCCGGCGCAAGCGCTGGGGCCGCGTCGCCGAGGAGATGAAGCTGGGCAAGCTGCAACACCCGGAGCGGAAGCTCGACCCGATATACATGCGGTACCTGCTGCCGTACGCCACGCTCTCCGACCAGGAGCGTCAAAACATAATGGCCGACGTTGAGAAATGCTGGACGACTAAGTACCAGCAGATGCTGAAGCGAGCCCGCAACCCGTTCCAGCGTCAGAACCGGATGCTGGTCGCCGATTGCGAGTCCGAGTCGGACGATGACGGCGAGGACACCAACACGGCGGGGGCTCTGCACGAGGCCGAGGACTGCATCGTCCAGGGACGGACCATGAACCTGGTCACCTTCAAGAAgATCGCCACGTCTCTTATGGACGCGCACTTTGAACAAAGCAAGCAGCCACCGAGCGCCGACGAGGTGGAGAAGGCGTATTGGCGCGCCGTGCTGCTTGGCACCGAATATATTGTGGCGAATACGGCATCGATAGACACCGGTGAAGAGGGTTACGGGTTCCCTAAAGACCCCGCATCCCAGTACGGAACCCACCCATGGAATCTGAAGGTGCTGGCTCGGAACCCGAACAACGTGCTCCGCTACCTGGGCGCGGTGCTGGGCGTGACGGTGCCCACGCTGCACATGAGCATGCTGTTCAGCACGTCCTGCTGGCACCGCGACCCGCACGGGCTGCCCTGGACGGAGTACATGCACAGCGGCGCCGAGAAGATCTGGTACGGCATCCCCCGCGACCAGAGCGCCAACTTCCGTCGCGCGGTGGAGACCCTCTGCCCCGCCTACTGTCAGAACAAGTCCATCTGGCTCGCGTCTGAGATCACCATGGTGCCGCCCACCATCCTGAGCGAGCACGGCGTGAAGCTGTCCCGGCTGCTGCAGAAGCCCGGGGAGTACGTGCTCGTGTTCCCCGAGGCCCACTCGTGCTCGATCACCACCGGTTTCGGCATATCGGAGAGCGTGTACTTCGCGTCCAACGCTTGGCTCGCGGACGTGTACAAGCTGTTCCAAGAGCTCCGCAAGAGCTGCGAGCCGACCATGTTCTCCTTGGAGCAGCTGCTGCTGGCCGGCAGCGCGGACCCGGCCGCCCCGCAGCAGGTGTGCTCCGTGCTCTGCACGCTGCTCGGCGCCGAGCTCGAGCACAGGCGCGCGCTCGAGAACAAGGGCCTCAAGGTGAGCCACTAA
- Protein Sequence
- MRLHADSDHERFLANRQVGARDEGDQPHQPAEVRRDRPDVQQIKPTKQQDNGPECVSASLIPKEEISIQKKQNLLENLSTSPALLNKFFNRLTSDMQDKFNLILAEELNDEASTSASKEPPSSMYLDHKAGSVLEALTFYPTAEEFADPISYYDKIAPQASMHGLCKIVPPEGFKPPCNMSDTIRFAVIYQYISKMYSRWGPVSRELAAIKAHLRTQSVVFARSPLLDGSEVNLPKLYHAVERNGGLSQVIRRKRWGRVAEEMKLGKLQHPERKLDPIYMRYLLPYATLSDQERQNIMADVEKCWTTKYQQMLKRARNPFQRQNRMLVADCESESDDDGEDTNTAGALHEAEDCIVQGRTMNLVTFKKIATSLMDAHFEQSKQPPSADEVEKAYWRAVLLGTEYIVANTASIDTGEEGYGFPKDPASQYGTHPWNLKVLARNPNNVLRYLGAVLGVTVPTLHMSMLFSTSCWHRDPHGLPWTEYMHSGAEKIWYGIPRDQSANFRRAVETLCPAYCQNKSIWLASEITMVPPTILSEHGVKLSRLLQKPGEYVLVFPEAHSCSITTGFGISESVYFASNAWLADVYKLFQELRKSCEPTMFSLEQLLLAGSADPAAPQQVCSVLCTLLGAELEHRRALENKGLKVSH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01072232;
- 90% Identity
- -
- 80% Identity
- -