Edem033306.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Epinotia demarniana
Gene Symbol
Arid2
Assembly
GCA_945869435.1
Location
CAMBUM010000682.1:109833-138115[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.7e-18 3.5e-14 54.4 0.0 1 89 16 101 16 101 0.94

Sequence Information

Coding Sequence
ATGTCTAAATCGCAAATAAATACGAAATCAAGCACGTATCTTAAGGAAAAGGAAGCATTTCTGAAAGAATTGAAGCAGTTTAATGAAAGCAAAAAcATACCATTCAAGACTCCATCTGTAAATTGCATTGATATAGACTTATATCTATTCTATTCGCTAGTACAGCAGCGAGGTGGTGTGGGCAAGGTTAACTTCTACGATGTGTGGGATTCATTTCTACGTCCACTGAGATTGCCCCACCCATGCGTCAATGGTTCGACATTGTTGAGAAGAATATATGGGACATACCTAGAAAAGTATGAGAAAGCTAAAGGCCCTCCAAGCAGGGATGACGACAATGATCTGGATGAAGACCTCAGGTCTACCCGAGGCAGGGGCAGGGATGCTCCAAGAACACCCTATGGAGGCGGCACATATTACACTGCATCGGGCGAGCCGCTGCGGACAGCCCAGACGCGCGTGGCCGGGCCCTCGGAGCGCCTGGCTCTGTCTCTGCTGTCGCCGATGCCCAACGAACAGGACTTCGCGGTCAATGTGTGCACCGTGTTGGCCGCCGACCACTCCAACCGGATGCCATTGGGATCCACTCCGCATATATTGGATTTCCTGCTGGCTCACGCTGGGGTTTATAATCATGGGAGTCTCCGAGACACAATCGGGCGCTCCTATTTCGAGGCCCGCGGCCGCTATCCGCATGAGTTCTGGCAGCTCCGCGCCGGCGGTGGAGGCGCCAAGGAACTCGCCGATGAGACGAAGTTCTCCCAACTTAGCGGAGACCAACCGGAATTGATGGTGCAAGCTTTAGCCGCACAGAACACTTTGAATGACTGCCTGATGAAGGAATGCGGGGGAGAGGAGTTGGTTGAGAAGATTATAGAAGAGGAAGCTCACGAGGACTGGGTGACAGAGCCCTCCGAAGACGAGCAACTTTTCGCGCCCGAGCTCCCGGGCGGGGCCGCATGTGTCTACACCCAACGCGTCCTCCAGATAGCCTCCATAGTCCGTTCGTTGTCCTTCCACGAGGAGAACGTACAGTACTTGTCGAAGAACACAACTTTGATAAGGTTCTTGTTGCTGTGTGCGAACTGCTGGGTCGGGAGTTTGAGGCAATCTGGGTTGGATGCGTTGGGGAACATCGCTACTGATCTTATTATCAAGGACCCGGCCACATGCCTGATATCTCGGCACATCCTGTCCACCATCCAATCGGCGCTGGTCTCCAACGACCGCGCCAGGGTTCTGGCGGCGTTGGAACTGCTCAACAAACTTGCACAGAACGAGGCGAATGAGGACGCTCTACTCAAGTCTCTGGAGGCTAAGGTGTACCACGACGTGTGCTCGCTATTGACACTGCGCGACATCATGGTGCTGGTGTGCACGCTGGAGTGCGTGTACGCGCTCACATCGCTCGGGGACCGCGCGGGCgagtgcgcggcgcgcgctggcGTCGTGCCCACGCTCGTGTCGCTCGTCACTGTGGAGGCGCAGAGCTACGGGCCGCGCGCGTGCATCCTGATGCGCGTGGTGGAGACGGTGAGCGGGCCcagcgcgctcgcggccgccgaccaggagcggcaagcgcagccgccgccaccgcagcgcgctcgcggccgccgaccaggagcggcaagcgcagccgccgccaccgcaggtaacttgatggtgatggtgatggtggagacggtgagcgggcccagcgcgctcgcggccgccgaCCAGGAGCGGCAAGCGCAGCCGCCGCAACCACAGgaCGACGACGATGATGATGTGGACGACGACGTCAATCATGATGATGACGACGACGATGATCATGCTGATGACGATGATAACAAAGACAACGATGATCATGATGTTGACGAAGACAACGGTGGTGATGGCGATGGTGATAACGAAGAAAACGAAGATCGTGGTGATGACAATGGTGATGACGAAGACAACGTTGATCATGGTGATGACGAAGACAACGGTGTTCATGGTGATGACGAAGACAACAGTGATCAAGGTGATAACGAAGACAACGGTGTTCATGGTGAAGACGAAGACAACAGTGATCAAGGTGATGACGAAGACAACGTTGATCATGGTGATGACGAAGACAACGGTGTTCATGGTGATGACGAAGACAACGGTGTTCATGGTGAAGACGAAGACAACAGTGATCAAGGTGATGACGAAGACAACGTTGATCATGGTGATGACGAAGACAACGGTGTTCATGTTGATGACGAAGACAACAGTGATCAAGGTGATGACGAAGACAACGTTGATCATGGTGATGATGAAGACAACGGTGTTAATGGTGATGACGAAGACAACAGTGATCAAggtgatgacgatgatgatggcGAAGACACCGGTGATCAAGGTGATGACGAAGATAACTGTGATCATGATGGTgacgaagatgatgatgatggctgcgACGAAGACAACGGTGTTCATGGTGAAGACGAAGACAACAGTGATCAAGGTGATGACGAAGACAACGTTGATCATGGTGATGACGAAGACAACGGTGTTCATGTTGATGACGAAGACAACAGTGATCAAGGTGATGACGAAGACAACGTTGATCATGGTGATGATGAAGACAACGGTGTTAATGGTGATGACGAAGACAACAGTGATCAAggtgatgacgatgatgatggcGAAGACACCGGTGATCAAGGTGATGACGAAGATAACTGTGATCATGATGGTgacgaagatgatgatgatgTGTCCTTGCCGTCTACTCCGACGAAGGCGGAGGTGCCTCAACCGCAGTCCCCGCAGCCGGCCGCGCCGCCGAACAGCATACAACACTCGCATATGCAGCAACGAACTGTGCAGGAAAACGAACACTTCGCGCAAGCCTGGCTCCGGAATACATACGAAGCGCTTCCTGTCGGCGACAACAGTACCTGCGACGCGCCTGAGCTGTACCGGCAGTACCTCGCCTGCTGCGCGAAGCTCAACAGGAAAGGGGTCATTGCACCCGCCAACCTGTCCCGACTGGTCAGGACCGTTTTTGGTGGGACCGTGGGGCCAAACACCATCACGCTACCATCGGGCGAAACCCAGCAGGTCTACATCGGCATTCGGTCTAAGAACCCGCAGAACAGAACCAATCCGCCAGGCAAGTCATGA
Protein Sequence
MSKSQINTKSSTYLKEKEAFLKELKQFNESKNIPFKTPSVNCIDIDLYLFYSLVQQRGGVGKVNFYDVWDSFLRPLRLPHPCVNGSTLLRRIYGTYLEKYEKAKGPPSRDDDNDLDEDLRSTRGRGRDAPRTPYGGGTYYTASGEPLRTAQTRVAGPSERLALSLLSPMPNEQDFAVNVCTVLAADHSNRMPLGSTPHILDFLLAHAGVYNHGSLRDTIGRSYFEARGRYPHEFWQLRAGGGGAKELADETKFSQLSGDQPELMVQALAAQNTLNDCLMKECGGEELVEKIIEEEAHEDWVTEPSEDEQLFAPELPGGAACVYTQRVLQIASIVRSLSFHEENVQYLSKNTTLIRFLLLCANCWVGSLRQSGLDALGNIATDLIIKDPATCLISRHILSTIQSALVSNDRARVLAALELLNKLAQNEANEDALLKSLEAKVYHDVCSLLTLRDIMVLVCTLECVYALTSLGDRAGECAARAGVVPTLVSLVTVEAQSYGPRACILMRVVETVSGPSALAAADQERQAQPPPPQRARGRRPGAASAAAATAGNLMVMVMVETVSGPSALAAADQERQAQPPQPQDDDDDDVDDDVNHDDDDDDDHADDDDNKDNDDHDVDEDNGGDGDGDNEENEDRGDDNGDDEDNVDHGDDEDNGVHGDDEDNSDQGDNEDNGVHGEDEDNSDQGDDEDNVDHGDDEDNGVHGDDEDNGVHGEDEDNSDQGDDEDNVDHGDDEDNGVHVDDEDNSDQGDDEDNVDHGDDEDNGVNGDDEDNSDQGDDDDDGEDTGDQGDDEDNCDHDGDEDDDDGCDEDNGVHGEDEDNSDQGDDEDNVDHGDDEDNGVHVDDEDNSDQGDDEDNVDHGDDEDNGVNGDDEDNSDQGDDDDDGEDTGDQGDDEDNCDHDGDEDDDDVSLPSTPTKAEVPQPQSPQPAAPPNSIQHSHMQQRTVQENEHFAQAWLRNTYEALPVGDNSTCDAPELYRQYLACCAKLNRKGVIAPANLSRLVRTVFGGTVGPNTITLPSGETQQVYIGIRSKNPQNRTNPPGKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-