Basic Information

Gene Symbol
osa
Assembly
GCA_945869435.1
Location
CAMBUM010000307.1:223060-266635[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4 3e+04 -3.0 0.0 42 88 54 107 53 107 0.60
2 2 1.9e-25 1.4e-21 78.2 0.0 2 89 400 484 399 484 0.94

Sequence Information

Coding Sequence
ATGGACTCTGTACGAAATGAAGAACGCGCTGGAGCGCCGAGCGAGCGAGCCGGCCGGAGCACGGCAAAAACATCGGCGCGGTTATCGCGGCCCCGTTGCCCGCGCCCCTGCCTGCCCCGCGGCGCTGCGCCCCTGGGACCGGACTCGTCTGATCGACGCCGGCGAGGCGGACTAACCTCGACGAACGAACGCAGGCGGCGTGGGGTCGCGGCTCGACTCGACTCGGCTTACTCGTGCGCCTCCTTCACTTCGAACGCGCTTCGTAGAGCTGACATTATAACATTACTTCGTTATAACTTCAAAGCGTATTTATGCGCGTACATGTTTACTGCCGATCTGACCGGTCAGAACAGCAATGACTCGGGCGGCAGCGGAGGCGCGGGGCGCGCTTCGACGCCGCACCTGAGGCCGACGCCCAGCCCCACCGGCTCCAGCGGATCCCGCTCCATGTCACCGGCTGTCGGTACGCAGAACGTaccgatgccgccgcggccgtcGTCTTCCCTGTCGGACGGCAGCGGGCCGACGTCGCgccccggcggcggcgcggcgcccggcCCGGCGCCCGGCCCCGTGCCGCCGCCCGGCGCCATGGTGGCGCAGCCCTACGGCCACCACGGCTACAAGCCCTACCCGCCGCAGCCCTACGGCTACCCGCCGAGGAACCACCACCCTTACCAGTACGGCTACCGGCCGCAGCCGCCGCACCCGCAGCATCCGCCGCCGCATCCACCGCAACACTACCCCCCGCTCAAACAGCAGCAACAGCCGCGGCACATGGGCCcgccgggcgcgggcgcggagggcGCCATGCCGCCGCCCACGGCGCCCGGCGACGTGCACGACAacgggcccgcgccgcccgccacggCGCTCGTCACCACCGGGCCCGacggcgcgccgctcgacgaGGGCAGCCAGCAGAGCACGCTCAGCAACGCCTCCGCAGCGAGCGGCGAGGAGCCGATCGGCACGCCGAAGCCGCGCAAGGACTTCGGGCCGGGCAGCGCGGCGCCCTCGCCCTCCCCGGGCGGCGGCAGCCACTCCTCCGCGCACGACGACTACGACGCCTCGCCCTCCTCCTGGCCGCGCCCGCCCTCTAGTCCCGTGTTTAACAGTCACATACAGCCGGAGTCCTACAGATCAAAGAAGTCGGACTCGCTGGGCAAGCTGTACGAGATGGACGACGCGCCGGAGCGGCGCGGCTGGGTGGAGCGGCTGCTGGCCTTCATGGAGGAGCGGCGCACACCCATCGCCGCCTGCCCCACCATCTCCAAGCAGCCGCTCGACCTCTACCGCCTCTACCTGCTCgtgcgcgaccgcggcggcttCGTCGAGGTGACGAAGAACAAGACGTGGAAGGACATCGCGGGGCTGCTGGGCATCGGCGCGTCCTCGTCGGCCGCGTACACGCTGCGCAAGCACTACACCAAGAACCTGCTCGCCTACGAGTGCCACTTCGACCGCGGGGGCATCGACCCGCAGCCCATCATCAACCAGGTCGAGGCCTCCACCAAGAAGAAGGGCGGCAAGTCCAACACCGCGCCTAGCGCAGGGTCGTCGAACTCGCAAGAATCATTCCCTCCGTCGAGCGGCGGAGCGGGCGCGGgtgcgggagcgggagcgggcgcgggcgccgccatGGAGCCCTACCCCGCGCAGTACCCGCCCTACCCGCCGCAGCCCAACTCCTCGCAAGGCGGCGGGCCGGCCGGCGACAACCTCGCCGCCTCCAACCCGTTCGACGAGCCCCCCCCGCCCCGCaggcccccgcccccgcccccagGTTACCAGCCTGGTTACGGGTACGAATACGGGTCTCCCTACCAGGCCACGAGGCCAGTGTACCCGCCTTATGGCCCTGAAGGGGACAGAGGGTACGGTGCCGGCAGCGAGTACCGCTACGGCGGCTACGGGtatcgcggcgcggcgccgggcgcagccacgccgccgccgcagccgcagccgcagccgcccTACCCCGACTACTACCGCGCGCCGCATCCGCAGCATccgcacccgcacccgcagCACCCGCCGCATCCCCACCCGCAGCACCAGCACCCGCCGCATCCGCCGCATCCGCAGCATCCGCAGCATCCGCAGCATCCGCAGCACCCGCAGCACCCGCAACACCCGCAGCCGCCGCCCGCCCAGCACGAGCTCCAACGTTACAACCGGTactgcctccgcgccgcaccgccaccgctgtcagtgcgtttcggcgtTTACTCGGTCGACAAGGCGGGAACCAATAGTAAGGAGTCGATCGGCCAACAGTACGGCGGCGGCAAACCCCTGGGccccgcgggcgcggcggcagcagcggcggcggcggcggcgggcgcgggggctcCGCGGCGGCATCCTGACTTCGCGAAGGCCGACGCGTACgcggcgcccggcgcgcccgccgcgcagcGCTTCCCCGGCGCGTGGCCCGGCGGCTTCCCGCGCGcgcagccgcccgcgccgcagcccgcctGGCGGCCCTCGCAGCAGCAGCCCTGGCCCGCGCAGCCCTACCCGCCGCAGGTCAGTACACGCACCCCGACTTCGCGAAGGCCGACGCGTACgcggcgcccggcgcgcccgccgcgcagcGCTTCCCCGGCGCGTGGCCCGGCGGCTTCCCGCGCGcgcagccgcccgcgccgcagcccgcctGGCGGCCCTCGCAGCAGCAGCCCTGGCCCGCGCAGCCCTACCCGCCGCAGGTCAGTACACGCACCCCGACTTCGCGAAGGCCGACGCGTACgcggcgcccggcgcgcccgccgcgcagcGCTTCCCCGGCGCGTGGCCCGGCGGCTTCCCGCGCGcgcagccgcccgcgccgcagcccgcctGGCGGCCCTCGCAGCAGCAGCCCTGGCCCGCGCAGCCCTACCCGCCGCAGGTCAGTACACGCACCCCGACTTCGCGAAGGCCGACGCGTACgcggcgcccggcgcgcccgccgcgcagcGCTTCCCCGGCGCGTGGCCCGGCGGCTTCCCGCGCGcgcagccgcccgcgccgcagcccgcctGGCGGCCCTCGCAGCAGCAGCCCTGGCCCGCGCAGCCCTACCCGCCGCAGGTCAGTACACGCACCCCGACTTCGCGAAGGCCGACGCGTACgcggcgcccggcgcgcccgccgcgcagcGCTTCCCCGGCGCGTGGCCCGGCGGCTTCCCGCGCGcgcagccgcccgcgccgcagcccgcctGGCGGCCCTCGCAGCAGCAGCCCTGGCCCGCGCAGCCCTACCCGCCGCAGGTCAGTACACGCACCCCGACTTCGCGAAGGCCGACGCGTACgcggcgcccggcgcgcccgccgcgcagcGCTTCCCCGGCGCGTGGCCCGGCGGCTTCCCGCGCGcgcagccgcccgcgccgcagcccgcctGGCGGCCCTCGCAGCAGCAGCCCTGGCCCGCGCAGCCCTACCCGCCGCAGGTCAGTACACGCACCCCGACTTCGCGAAGGCCGACGCGTACgcggcgcccggcgcgcccgccgcgcagcGCTTCCCCGGCGCGTGGCCCGGCGGCTTCCCGCGCGcgcagccgcccgcgccgcagcccgcctGGCGGCCCTCGCAGCAGCAGCCCTGGCCCGCGCAGCCCTACCCGCCGCAGGTCAGTACACGCACCCCGACTTCGCGAAGGCCGACGCGTACgcggcgcccggcgcgcccgccgcgcagcGCTTCCCCGGCGCGTGGCCCGGCGGCTTCCCGCGCGcgcagccgcccgcgccgcagcccgcctGGCGGCCCTCGCAGCAGCAGCCCTGGCCCGCGCAGCCCTACCCGCCGCAGGTCAGTACACGCACCCCGACTTCGCGAAGGCCGACGCGTACgcggcgcccggcgcgcccgccgcgcagcGCTTCCCCGGCGCGTGGCCCGGCGGCTTCCCGCGCGcgcagccgcccgcgccgcagcccgcctGGCGGCCCTCGCAGCAGCAGCCCTGGCCCGCGCAGCCCTACCCGCCGCAGGTCAGTACACGCACCCCGACTTCGCGAAGGCCGACGCGTACgcggcgcccggcgcgcccgccgcgcagcGCTTCCCCGGCGCGTGGCCCGGCGGCTTCCCGCGCGcgcagccgcccgcgccgcagcccgcctGGCGGCCCTCGCAGCAGCAGCCCTGGCCCGCGCAGCCCTACCCGCCGCAGGTCAGTACACGCACCCCGACTTCGCGAAGGCCGACGCGTACgcggcgcccggcgcgcccgccgcgcagcGCTTCCCCGGCGCGTGGCCCGGCGGCTTCCCGCGCGcgcagccgcccgcgccgcagcccgcctGGCGGCCCTCGCAGCAGCAGCCCTGGCCCGCGCAGCCCTACCCGCCGCAGGTCAGTACACGCACCCCGACTTCGCGAAGGCCGACGCGTACgcggcgcccggcgcgcccgccgcgcagcGCTTCCCCGGCGCGTGGCCCGGCGGCTTCCCGCGCGcgcagccgcccgcgccgcagcccgcctGGCGGCCCTCGCAGCAGCAGCCCTGGCCCGCGCAGCCCTGCCCGCCGCAGGTCAGTACACGCACCCCGACTTCGCGAAGGCCGACGCGTACgcggcgcccggcgcgcccgccgcgcagcGCTTCCCCGGCGCGTGGCCCGGCGGCTTCCCGCGCGcgcagccgcccgcgccgcagcccgcctGGCGGCCCTCGCAGCAGCAGCCCTGGCCCGCGCAGCCCTGCCCGCCGCAGGTCAGTACACGCACCCCGACTTCGCGAAGGCCGACGCGTACgcggcgcccggcgcgcccgccgcgcagcGCTTCCCCGGCGCGTGGCCCGGCGGCTTCCCGCGCGcgcagccgcccgcgccgcagcccgcctGGCGGCCCTCGCAGCAGCAGCCCTGGCCCGCGCAGCCCTACCCGCCGCAGGTCAGTACACGCACCCCGACTTCGCGAAGGCCGACGCGTACgcggcgcccggcgcgcccgccgcgcagcGCTTCCCCGGCGCGTGGCCCGGCGGCTTCCCGCGCGcgcagccgcccgcgccgcagcccgcctGGCGGCCCTCGCAGCAGCAGCCCTGGCCCGCGCAGCCCTACCCGCCGCAGGTCAGTACACGCACCCCGACTTCGCGAAGGCCGACGCGTACgcggcgcccggcgcgcccgccgcgcagcGCTTCCCCGGCGCGTGGCCCGGCGGCTTCCCGCGCGcgcagccgcccgcgccgcagcccgcctGGCGGCCCTCGCAGCAGCAGCCCTGGCCCGCGCAGCCCTACCCGCCGCAGGTCAGTACACGCACCCCGACTTCGCGAAGGCCGACGCGTACgcggcgcccggcgcgcccgccgcgcagcGCTTCCCCGGCGCGTGGCCCGGCGGCTTCCCGCGCGcgcagccgcccgcgccgcagcccgcctGGCGGCCCTCGCAGCAGCAGCCCTGGCCCGCGCAGCCCTACCCGCCGCAGGTCAGTACACGCACCCCGACTTCGCGAAGGCCGACGCGTACgcggcgcccggcgcgcccgccgcgcagcGCTTCCCCGGCGCGTGGCCCGGCGGCTTCCCGCGCGcgcagccgcccgcgccgcagcccgcctGGCGGCCCTCGCAGCAGCAGCCCTGGCCCGCGCAGCCCTACCCGCCGCAGGTCAGTACACGCACCCCGACTTCGCGAAGGCCGACGCGTACgcggcgcccggcgcgcccgccgcgcagcGCTTCCCCGGCGCGTGGCCCGGCGGCTTCCCGCGCGcgcagccgcccgcgccgcagcccgcctGGCGGCCCTCGCAGCAGCAGCCCTGGCCCGCGCAGCCCTACCCGCCGCAGGTCAGTACACGCACCCCGACTTCGCGAAGGCCGACGCGTACgcggcgcccggcgcgcccgccgcgcagcGCTTCCCCGGCGCGTGGCCCGGCGGCTTCCCGCGCGcgcagccgcccgcgccgcagcccgcctGGCGGCCCTCGCAGCAGCAGCCCTGGCCCGCGCAGCCCTACCCGCCGCAGGTCAGTACACGCACCCCGACTTCGCGAAGGCCGACGCGTACgcggcgcccggcgcgcccgccgcgcagcGCTTCCCCGGCGCGTGGCCCGGCGGCTTCCCGCGCGcgcagccgcccgcgccgcagcccgcctGGCGGCCCTCGCAGCAGCAGCCCTGGCCCGCGCAGCCCTACCCGCCGCAGGTCAGTACACGCACCCCGACTTCGCGAAGGCCGACGCGTACgcggcgcccggcgcgcccgccgcgcagcGCTTCCCCGGCGCGTGGCCCGGCGGCTTCCCGCGCGcgcagccgcccgcgccgcagcccgcctGGCGGCCCTCGCAGCAGCAGCCCTGGCCCGCGCAGCCCTACCCGCCGCAGGTCAGTACACGCACCCCGACTTCGCGAAGGCCGACGCGTACgcggcgcccggcgcgcccgccgcgcagcGCTTCCCCGGCGCGTGGCCCGGCGGCTTCCCGCGCGcgcagccgcccgcgccgcagcccgcctGGCGGCCCTCGCAGCAGCAGCCCTGGCCCGCGCAGCCCTACCCGCCGCAGGTCAGTACACGCACCCCGACTTCGCGAAGGCCGACGCGTACgcggcgcccggcgcgcccgccgcgcagcGCTTCCCCGGCGCGTGGCCCGGCGGCTTCCCGCGCGcgcagccgcccgcgccgcagcccgcctGGCGGCCCTCGCAGCAGCAGCCCTGGCCCGCGCAGCCCTACCCGCCGCAGGTCAGTACACGCACCCCGACTTCGCGAAGGCCGACGCGTACgcggcgcccggcgcgcccgccgcgcagcGCTTCCCCGGCGCGTGGCCCGGCGGCTTCCCGCGCGcgcagccgcccgcgccgcagcccgcctGGCGGCCCTCGCAGCAGCAGCCCTGGCCCGCGCAGCCCTACCCGCCGCAGGTCAGTACACGCACCCCGACTTCGCGAAGGCCGACGCGTACgcggcgcccggcgcgcccgccgcgcagcGCTTCCCCGGCGCGTGGCCCGGCGGCTTCCCGCGCGcgcagccgcccgcgccgcagcccgcctGGCGGCCCTCGCAGCAGCAGCCCTGGCCCGCGCAGCCCTACCCGCCGCAGGTCAGTACACGCACCCCGACTTCGCGAAGGCCGACGCGTACgcggcgcccggcgcgcccgccgcgcagcGCTTCCCCGGCGCGTGGCCCGGCGGCTTCCCGCGCGCGCAGCCGCCCGCGCCACAGCCCGCCTGGCGGCCCTCGCAGCAGCAGCCCTGGCCCGCGCAGCCCTACCCGCCGCAGGTCAGTACACGCACCCCGACTTCGCGAAGGCCGACGCGTACgcggcgcccggcgcgcccgccgcgcagcGCTTCCCCGGCGCGTGGCCCGGCGGCTTCCCGCGCGcgcagccgcccgcgccgcagcccgcctGGCGGCCCTCGCAGCAGCAGCCCTGGCCCGCGCAGCCCTACCCGCCGCAGGTCAGTACACGCACCCCGACTTCGCGAAGGCCGACGCGTACgcggcgcccggcgcgcccgccgcgcagcGCTTCCCCGGCGCGTGGCCCGGCGGCTTCCCGCGCGcgcagccgcccgcgccgcagcccgcctGGCGGCCCTCGCAGCAGCAGCCCTGGCCCGCGCAGCCCTACCCGCCGCAGGTCAGTACACGCACCCCGACTTCGCGAAGGCCGACGCGTACgcggcgcccggcgcgcccgccgcgcagcGCTTCCCCGGCGCGTGGCCCGGCGGCTTCCCGCGCGcgcagccgcccgcgccgcagcccgcctGGCGGCCCTCGCAGCAGCAGCCCTGGCCCGCGCAGCCCTACCCGCCGCAGGTCAGTACACGCACCCCGACTTCGCGAAGGCCGACGCGTACgcggcgcccggcgcgcccgccgcgcagcCGCCGACCACGACCTTCAGCTTCAGCCCTGCTCCCCGCAGGTCAGTCCAACACCCACCACCTCCCGCCGCAACCCCAAGCCGGGACGTGTGCGCCGAGACAATATCTTACGCCGCAACACCGAGAACGAAGCGGTCTTGTGTCTAA
Protein Sequence
MDSVRNEERAGAPSERAGRSTAKTSARLSRPRCPRPCLPRGAAPLGPDSSDRRRRGGLTSTNERRRRGVAARLDSAYSCASFTSNALRRADIITLLRYNFKAYLCAYMFTADLTGQNSNDSGGSGGAGRASTPHLRPTPSPTGSSGSRSMSPAVGTQNVPMPPRPSSSLSDGSGPTSRPGGGAAPGPAPGPVPPPGAMVAQPYGHHGYKPYPPQPYGYPPRNHHPYQYGYRPQPPHPQHPPPHPPQHYPPLKQQQQPRHMGPPGAGAEGAMPPPTAPGDVHDNGPAPPATALVTTGPDGAPLDEGSQQSTLSNASAASGEEPIGTPKPRKDFGPGSAAPSPSPGGGSHSSAHDDYDASPSSWPRPPSSPVFNSHIQPESYRSKKSDSLGKLYEMDDAPERRGWVERLLAFMEERRTPIAACPTISKQPLDLYRLYLLVRDRGGFVEVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAYECHFDRGGIDPQPIINQVEASTKKKGGKSNTAPSAGSSNSQESFPPSSGGAGAGAGAGAGAGAAMEPYPAQYPPYPPQPNSSQGGGPAGDNLAASNPFDEPPPPRRPPPPPPGYQPGYGYEYGSPYQATRPVYPPYGPEGDRGYGAGSEYRYGGYGYRGAAPGAATPPPQPQPQPPYPDYYRAPHPQHPHPHPQHPPHPHPQHQHPPHPPHPQHPQHPQHPQHPQHPQHPQPPPAQHELQRYNRYCLRAAPPPLSVRFGVYSVDKAGTNSKESIGQQYGGGKPLGPAGAAAAAAAAAAGAGAPRRHPDFAKADAYAAPGAPAAQRFPGAWPGGFPRAQPPAPQPAWRPSQQQPWPAQPYPPQVSTRTPTSRRPTRTRRPARPPRSASPARGPAASRARSRPRRSPPGGPRSSSPGPRSPTRRRSVHAPRLREGRRVRGARRARRAALPRRVARRLPARAAARAAARLAALAAAALARAALPAAGQYTHPDFAKADAYAAPGAPAAQRFPGAWPGGFPRAQPPAPQPAWRPSQQQPWPAQPYPPQVSTRTPTSRRPTRTRRPARPPRSASPARGPAASRARSRPRRSPPGGPRSSSPGPRSPTRRRSVHAPRLREGRRVRGARRARRAALPRRVARRLPARAAARAAARLAALAAAALARAALPAAGQYTHPDFAKADAYAAPGAPAAQRFPGAWPGGFPRAQPPAPQPAWRPSQQQPWPAQPYPPQVSTRTPTSRRPTRTRRPARPPRSASPARGPAASRARSRPRRSPPGGPRSSSPGPRSPTRRRSVHAPRLREGRRVRGARRARRAALPRRVARRLPARAAARAAARLAALAAAALARAALPAAGQYTHPDFAKADAYAAPGAPAAQRFPGAWPGGFPRAQPPAPQPAWRPSQQQPWPAQPYPPQVSTRTPTSRRPTRTRRPARPPRSASPARGPAASRARSRPRRSPPGGPRSSSPGPRSPTRRRSVHAPRLREGRRVRGARRARRAALPRRVARRLPARAAARAAARLAALAAAALARAALPAAGQYTHPDFAKADAYAAPGAPAAQRFPGAWPGGFPRAQPPAPQPAWRPSQQQPWPAQPCPPQVSTRTPTSRRPTRTRRPARPPRSASPARGPAASRARSRPRRSPPGGPRSSSPGPRSPTRRRSVHAPRLREGRRVRGARRARRAALPRRVARRLPARAAARAAARLAALAAAALARAALPAAGQYTHPDFAKADAYAAPGAPAAQRFPGAWPGGFPRAQPPAPQPAWRPSQQQPWPAQPYPPQVSTRTPTSRRPTRTRRPARPPRSASPARGPAASRARSRPRRSPPGGPRSSSPGPRSPTRRRSVHAPRLREGRRVRGARRARRAALPRRVARRLPARAAARAAARLAALAAAALARAALPAAGQYTHPDFAKADAYAAPGAPAAQRFPGAWPGGFPRAQPPAPQPAWRPSQQQPWPAQPYPPQVSTRTPTSRRPTRTRRPARPPRSASPARGPAASRARSRPRRSPPGGPRSSSPGPRSPTRRRSVHAPRLREGRRVRGARRARRAALPRRVARRLPARAAARAAARLAALAAAALARAALPAAGQYTHPDFAKADAYAAPGAPAAQRFPGAWPGGFPRAQPPAPQPAWRPSQQQPWPAQPYPPQVSTRTPTSRRPTRTRRPARPPRSASPARGPAASRARSRPRRSPPGGPRSSSPGPRSPTRRRSVHAPRLREGRRVRGARRARRAALPRRVARRLPARAAARAAARLAALAAAALARAALPAAGQYTHPDFAKADAYAAPGAPAAQRFPGAWPGGFPRAQPPAPQPAWRPSQQQPWPAQPYPPQVSTRTPTSRRPTRTRRPARPPRSASPARGPAASRARSRPRRSPPGGPRSSSPGPRSPTRRRSVHAPRLREGRRVRGARRARRAALPRRVARRLPARAAARATARLAALAAAALARAALPAAGQYTHPDFAKADAYAAPGAPAAQRFPGAWPGGFPRAQPPAPQPAWRPSQQQPWPAQPYPPQVSTRTPTSRRPTRTRRPARPPRSASPARGPAASRARSRPRRSPPGGPRSSSPGPRSPTRRRSVHAPRLREGRRVRGARRARRAALPRRVARRLPARAAARAAARLAALAAAALARAALPAAGQYTHPDFAKADAYAAPGAPAAQPPTTTFSFSPAPRRSVQHPPPPAATPSRDVCAETISYAATPRTKRSCV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-