Edem023410.1
Basic Information
- Insect
- Epinotia demarniana
- Gene Symbol
- XBP1
- Assembly
- GCA_945869435.1
- Location
- CAMBUM010000420.1:769797-773845[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.1 1.4e+04 -2.3 0.1 16 25 29 38 27 39 0.73 2 3 1.9e-16 4.3e-13 50.5 12.1 2 63 43 104 43 106 0.94 3 3 0.00015 0.34 12.4 1.0 33 55 88 110 87 113 0.92
Sequence Information
- Coding Sequence
- ATGAGTGCTCCGATAATCATCACGGTGCCGAACAACTATCTGGCGGTGGATGAAGACCAGAAGGTGGTCCTGGCGCCGGCGTCTCCCGCCCCGTCGCGGAAGCGCCGGCTCGACCACCTGTCTTGGGAGGAGAAGATGCAAAGAAAAAAACTGAAGAACCGCGTGGCGGCGCAAACCTCCCGCGACAGGAAAAAGGCCAAGATGGATGAGATGGATGCCAAGCTTCAGGAGTTCATTGACAGGAATGAACGGCTGAtcagtgagGTGGAAAGCCTCAAGGCGTTGAACGAGCGTTTGTTGAGCGAGAACGCAGCGCTGCGCGCGGAGCGCAGTGTCTCGGGGGCCCGGGGACCGGCAGAGTCTACTCCTCGGCGGCAGGAGGGGCCCCCCCAGGCactgcgcgcggcgcgcctgcTGCTGGCGATGTGTCTCCTCTCGCAGACCTCCTCCAGCACCTCGAGTCTGAAGAGTACCTCGACACCCTGCAGCAGCTGGCAGACTCCCTCCTCCAGGAAATTGATGCAGGCTGTGCAGGAACGGCTCAAGATGTCCCAGTGCGGGTCGCTGGAGAGCGCGCTAAAGGAGCTGAAGTGGTGGGGCCCGCACCAGAGCACCTGGAACCCAGTGAAGATGGAGTCCTAG
- Protein Sequence
- MSAPIIITVPNNYLAVDEDQKVVLAPASPAPSRKRRLDHLSWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMDAKLQEFIDRNERLISEVESLKALNERLLSENAALRAERSVSGARGPAESTPRRQEGPPQALRAARLLLAMCLLSQTSSSTSSLKSTSTPCSSWQTPSSRKLMQAVQERLKMSQCGSLESALKELKWWGPHQSTWNPVKMES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01019964;
- 90% Identity
- iTF_00656883;
- 80% Identity
- -