Ebru027387.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Epinotia brunnichana
Gene Symbol
stc
Assembly
GCA_963854355.1
Location
OY977942.1:25985491-26026739[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.082 2e+03 0.9 1.5 2 10 639 647 639 647 0.93
2 16 0.00038 9.6 8.3 20.3 4 19 655 670 653 670 0.93
3 16 4e-07 0.01 17.9 14.7 1 18 706 723 706 724 0.97
4 16 0.00052 13 7.9 9.8 1 18 765 782 765 783 0.98
5 16 0.02 5.1e+02 2.8 3.9 1 18 814 831 814 832 0.96
6 16 0.00052 13 7.9 9.8 1 18 863 880 863 881 0.98
7 16 0.00017 4.1 9.5 9.9 1 18 912 929 912 930 0.98
8 16 0.00052 13 7.9 9.8 1 18 961 978 961 979 0.98
9 16 4.9e-05 1.2 11.2 10.3 1 19 1020 1042 1020 1042 0.86
10 16 0.01 2.5e+02 3.8 6.8 1 11 1082 1092 1082 1093 0.94
11 16 0.31 7.9e+03 -1.0 0.4 4 10 1097 1103 1096 1105 0.92
12 16 6.3e-05 1.6 10.8 15.8 3 18 1111 1126 1099 1127 0.87
13 16 0.00032 7.9 8.6 9.4 10 18 1174 1182 1172 1183 0.92
14 16 1.4e-07 0.0035 19.3 14.3 1 17 1219 1237 1219 1243 0.83
15 16 0.0016 40 6.4 7.9 1 13 1249 1260 1249 1261 0.97
16 16 1.5 3.8e+04 -3.2 0.6 7 12 1293 1298 1287 1298 0.68

Sequence Information

Coding Sequence
ATGTCCCAGTGGAACAATTCTTACGCTAACAACCTCCAAGGCTCCAATACCTGGAATGGTGAAGCAGATAACCAATATTCTAACCAACAGTACTACCCCACCGCACACCCTACTTATGAATCAACCAACCAGTATGTAAATTTTCAAGAGTTTCTATCTCAAATGCAGGGTAGTAGCGGTGGCGCGTCCAATTCTGCCTCATACAATCCTCAGTATCAAAATTATCCTAACAACCATTATGAATATCAAAACATGCCATCAACATCTCAGAATCAAGCTCAAAATTCATACTATCCAACCAATTCAAGTAATGCCATTGGTTTAAAAGTCCAAACCACACCCACTCCAAATACAGCACCAGAACCTAACTGTGACAACTCCATGGTATTTACATCGAATCTTACGCCAACGGCTACTGAATTTGTGCCAAAGGGGACGTCTCAGAAGCAATCAAGTCCTCCAGAAGACTCTTCCAGCTATAACGGAGTATCAGAAGCCAAGAGTGACCACACAGCTGATAGGAACTGGAGAGAGAAACAGTCTTCCCAACCAAGCAGTTCCCGTAGCTATAATGAACCAAGGAATGATCCAGAATCCAAGAAAAAAACAGATAAAGACCGTAAGCGAGGTAATAAAGGTCGAAACAATGATGTAAGTAgtcaaaatgaaacaaatagtCAATACAATGAGCTTAATAGTCAAAATGGTGATGGTGGTGAATATGAATCAAATACTTACAGTTATGACTCTAGCAAACATGGTGCAGAGTATAGCAGTCGTAATCATGATGCTAGTAGTCGAAAATATGAAAATAAGAACAGTCGCAGGAATGAGTCTAGCCGTAACTATGAGGGTGGCAGTCGCATCAATGATTCCAATAGCTACAACAACGAATCAAGCAGTCGGAACAACGATTCAGAGCGTAATTATGATTCTCAAGATCGTAACTACTCAAATAGGAACAATGAGTCTGATAACCGACACTACGAATCCAGCAGTCGCAATTACGACTCCAAAAAGCGCAACTACAATAATCGTAGCAATGACTCTAATAATCGCCATGAAGGCAGTCGCAATAACGATTCCACCAGTCGTAACTACGATAGTCGCGGTGATTCAAGCCGAAGCTCGGACTACCGTAGAAACGACTTCAACGGCCGGGACAGTGACTACAATAGTCGTAATAATGATTACAATAGTCACAGCAATGACTACAACAGTCGCAGCAATGACTACAACAGTCGTAGCAATGACTACAACAGTCGGAATGACTACAATGATAGTCGTAATGATTATAGTGGTCGTAACCAGGATTATAGAGAATCAAACCGTTATGACAGCAATAGAGGAAGTAAATCTAAGAGCAAAGATGCTGACAATCGGACTTTTTACAGTAGTACAGCCAAGAGTAGCCAGGATGTTAGGAGTGGGAGGGCAGAGAGAGGAGAAGGCTCTGGTAGGAGTAGGAACTGGGCTGGAACTCAGCGGGTGCGACCTATGGAGAGAGCTGACGATGAGCAGTTTGCTAAAGGCTATTTAGACAGTCGGGAGGATAGGTACTCAAAGGGAAGACCAGAATCTATGTTCAGTCCTATGAGGAACAGGAATAAACAAGCAGATTATGctgAAAACACAGACATGACCCAACGGGAGCGGCTCTCGGAGCAGCTGGACAAGGGGACCCTGGAATGCCTGGTGTGCTGCGAGCGAGTGAAACAGATAGACACGGTGTGGTCCTGCAGCAACTGCTACCATGTGCTGCATCTCCGCTGCATCAGGAAATGGGCCATGAGCAGCATCATAGAGGGCAAATGGCGGTGCCCAGCCTGCCAAAACACGAGCTCCGAAATTCCGACGGAGTACCGCTGCATGTGCGGCGCCGTGCGGAGCCCCGACTACCAGCGCGGACAGCACGGGGCGCACACTTGTGGACAGGCATGCCAACGGGTGCGCCCCTGTCCGCACCCCTGCACGCTGCCGTGCCACCCGGGGCCCTGCCCGCCCTGCCAGGCTACGGTCTCCAAACAATGCGGCTGCGGCGCCGAGACTCGCTCCATCCTCTGCAGCAGTAAACTGCCGCAAGTGTGCGGGCGAGTGTGCTCGCGCAAGCTAGAGTGCGGAGTGCACACGTGCGAGGGGGAGTGCCACGAGGGCGCGTGCGAGCCGTGCGAGGCCTCCGTCGAACAAGTGTGCTACTGCCCAGCGGCCACGGCCCGGTCGGTCCCGTGCACGCTCGCGACCGGCAGCTCCCCGCACTGGTCGTGCGGCGCGGCGTGCGCGCGCGTGCTGTCGTGCGGCGCGCACGTGTGCCGCGCGCCGTGCCACGCGCCGCCGTGCGCCGCGTGCGCGCTGCAGCCGGCCAGCGTGCTGGCGTGCCCGTGCGGCCGGACCCGCTCCCCGCACCGGTCGTGCGGCGCGGCGTGCGCGCGCGTGCTGTCGTGCGGCGCGCACGCGTGCCGCGCGCCGTACCACGCGCCGCCGTGCGCCGCGTGCGCGCTGCAGCCGGCCAGCGTGCTGGCGTGCCCGTGCGGCCGGACCCGCTCCCCGCACCGGTCGTGCGGCGCGGCGTGCGCGCGCGTGCTGTCGTGCGGCGCGCACGTGTGCCGCGCGCCGTGCCACGCGCCGCCGTGCGCCGCGTGCGCGCTGCAGCCGGCCAGCGTGCTGGCGTGCCCGTGCGGCCGGACCCGCTCCCCGCACCGGTCGTGCGGCGCGGCGTGCGCGCGCGTGCTGTCGTGCGGCGCGCACGCGTGCCGCGCGCCGTGCCACGCGCCGCCGTGCGCCGCGTGCGCGCTGCAGCCGGCCAGCGTGCTGGCGTGCCCGTGCGGCCGGACCCGCTCCCCGCACCGGTCGTGCGGCGCGGCGTGCGCGCGCGTGCTGTCGTGCGGCGCGCACGTGTGCCGCGCGCCGTGCCACGCGCCGCCGTGCGCCGCGTGCGCGCTGCAGCCGGCCAGCGTGCTGGCGTGCCCGTGCGGCCGGACCCGGATACCCAAAGACGCCCGAAAATCGTGCACGGACCCGATCCCGCTGTGCGGCAACATCTGCGCCAAGCCCCTCCAGTGCGGACCCGCCGGCGACATGCACTTCTGCAAGCTCGACTGCCATGAAGGTCAATGCCCCGTGTGCCCAGACAAGACCCTGGTGGCGTGTCGCTGCGGGCACTCTAGCCGCGAGATACTCTGCGCGGAACTGCCGCAGATGTTGGACAACGTGTTCTGTCAGAAGAAATGCAATAAGaaaCTGTCATGCGGTCGTCACCGCTGCCGCGCCTCGTGCTGCGCAGCCACTACGCATCGTTGCGGGGTGGTGTGTGGCCGCATGCTCGCGTGCCAGCTGCACCGCTGCGAGCAGTTCTGCCACACCGGACACTGCGCGCCTTGCGACAGAGCCAGCTTCGAGGAGCTGACGTGCGAGTGCGGCGCCGAGGTCCTTCTTCCGCCAATCCCCTGCGGCAGCAAGCGGCCCGCCTGCAGCGCCCCGTGCCGGCGCCCGCGCCCCTGCGAGCACCCCGCGCTGCACGCGTGCCACGAGGGCCCTTGCCCGCCCTGCGTCGTGCTCACTGCCAAGCGGTGCCACGGGCAGCACGAGGAAAGGAAAACGATCCCGTGCTCGCAAGACGAGTTCTCGTGCGGACTGCCTTGTGGAAAACCGCTGCCGTGCGGGAAGCACTCCTGTCAGAAAATATGCCACAAAGGACCCTGTGATGCTGGCAAATGCACCCAACCCTGCAACGAGAAGCGCCCGAGCTGCGGGCACCCGTGCGCCGCGCCGTGCCACTCGGGCGGCGGGGACAAGGGGGACAAAGGGGACAAGTGTCCCAGCAGCGCGCCGTGCCGCAAGCTCGTGCGCGCGCAGTGCCCGTGCGGCCGCCGGACTTCCGAGCGCTCGTGCCATGAGAACGCAAGAGACTTGGCTAAAATAATGAGTGCGCTGGCCGTCTCAAAGATGCAGGAAGGTGGTTCGGTGGATCTCTCGGAAGTACAGCGCCCCACCGCAATGCTCAAAACACTGGAGTGCGACGACGAGTGCCGCGTAGAAGCGCGCACGCGGCGCATCGCGCTCGCACTACAGATCCGTAACCCTGACGTGTCCGCCAAGCTGCAGCCGCGCTACAGCGACCACGtgcgcgcgctcgccgcccgCGAGCCCGCCTTCGCGCGCCAGGTGCACGACAAGCTCACCGAGCTCGTGCAACTAGCCAAGAAGCAGTTGCTCGCTGACGTGTCCGCCAAGCTGCAGCCGCGCTACAGCGACCACGtgcgcgcgctcgccgcccgCGAGCCCGCCTTCGCGCGCCAGGTGCACGACAAGCTCACCGAGCTCGTGCAACTAGCCAAGAAGCAGTTGCTCGCTGACGTGTCCGCCAAGCTGCAGCCGCGCTACAGCGACCACGtgcgcgcgctcgccgcccgCGAGCCCGCCTTCGCGCGCCAGGTGCACGACAAGCTCACCGAGCTCGTGCAACTAGCCAAGAAGCAGTTGCTCGCTGACGTGTCCGCCAAGCTGCAGCCGCGCTACAGCGACCACGtgcgcgcgctcgccgcccgCGAGCCCGCCTTCGCGCGCCAGGTGCACGACAAGCTCACCGAGCTCGTGCAACTAGCCAAGAAGCAGTTGCTCGCTGACGTGTCCGCCAAGCTGCAGCCGCGCTACAGCGACCACGtgcgcgcgctcgccgcccgCGAGCCCGCCTTCGCGCGCCAGGTGCACGACAAGCTCACCGAGCTCGTGCAACTAGCCAAGAAGCAGTTGCTCGCTGACGTGTCCGCCAAGCTGCAGCCGCGCTACAGCGACCACGtgcgcgcgctcgccgcccgCGAGCCCGCCTTCGCGCGCCAGGTGCACGACAAGCTCACCGAGCTCGTGCAACTAGCCAAGAAGCAGTTGCTCGCTGACGTGTCCGCCAAGCTGCAGCCGCGCTACAGCGACCACGtgcgcgcgctcgccgcccgCGAGCCCGCCTTCGCGCGCCAGGTGCACGACAAGCTCACCGAGCTCGTGCAACTAGCCAAGAAGCAGTTGCTCGCTGACGTGTCCGCCAAGCTGCAGCCGCGCTACAGCGACCACGtgcgcgcgctcgccgcccgCGAGCCCGCCTTCGCGCGCCAGGTGCACGACAAGCTCACCGAGCTCGTGCAACTAGCCAAGAAGCAGTTGCTCGCTGACGTGTCCGCCAAGCTGCAGCCGCGCTACAGCGACCACGtgcgcgcgctcgccgcccgCGAGCCCGCCTTCGCGCGCCAGGTGCACGACAAGCTCACCGAGCTCGTGCAACTAGCCAAGAAGTCGAAGCAGAAGACGCGAGCGCACTCGTTCCCGTCGTGCAACTGGCAGAAGCGGCAGTTCATTCACGAGCTGTGCGAGCAGTTCGGCTGCGAGGGCGTCGCGTACGACGCGGAGCCCAACCGGAACGTGGTCGCCACCGCCGACAAGGAGAAGTCGTGGCTGCCGGCGATGAGCGTGCTGGAGGTGCTGGCGCGCGAGACCGGCAAGCGGCGCGTGCCCGGGCCCGTgctgcgcgcgcccgcgcccgcgcccgccgccagCAGCACCGGCAACACCAAAGCGGCGAGTGGCTGGGCGACGCTGACGTCGACCAACGcgtgggcggcgcgcgcgcacaaAGCcgaacaacaacaacaacaacaacaacaacaacaacaacaacaaccaGCGCGGCCCAAGATCGACTACTTCGACAACCCGCCGGACAACTAG
Protein Sequence
MSQWNNSYANNLQGSNTWNGEADNQYSNQQYYPTAHPTYESTNQYVNFQEFLSQMQGSSGGASNSASYNPQYQNYPNNHYEYQNMPSTSQNQAQNSYYPTNSSNAIGLKVQTTPTPNTAPEPNCDNSMVFTSNLTPTATEFVPKGTSQKQSSPPEDSSSYNGVSEAKSDHTADRNWREKQSSQPSSSRSYNEPRNDPESKKKTDKDRKRGNKGRNNDVSSQNETNSQYNELNSQNGDGGEYESNTYSYDSSKHGAEYSSRNHDASSRKYENKNSRRNESSRNYEGGSRINDSNSYNNESSSRNNDSERNYDSQDRNYSNRNNESDNRHYESSSRNYDSKKRNYNNRSNDSNNRHEGSRNNDSTSRNYDSRGDSSRSSDYRRNDFNGRDSDYNSRNNDYNSHSNDYNSRSNDYNSRSNDYNSRNDYNDSRNDYSGRNQDYRESNRYDSNRGSKSKSKDADNRTFYSSTAKSSQDVRSGRAERGEGSGRSRNWAGTQRVRPMERADDEQFAKGYLDSREDRYSKGRPESMFSPMRNRNKQADYAENTDMTQRERLSEQLDKGTLECLVCCERVKQIDTVWSCSNCYHVLHLRCIRKWAMSSIIEGKWRCPACQNTSSEIPTEYRCMCGAVRSPDYQRGQHGAHTCGQACQRVRPCPHPCTLPCHPGPCPPCQATVSKQCGCGAETRSILCSSKLPQVCGRVCSRKLECGVHTCEGECHEGACEPCEASVEQVCYCPAATARSVPCTLATGSSPHWSCGAACARVLSCGAHVCRAPCHAPPCAACALQPASVLACPCGRTRSPHRSCGAACARVLSCGAHACRAPYHAPPCAACALQPASVLACPCGRTRSPHRSCGAACARVLSCGAHVCRAPCHAPPCAACALQPASVLACPCGRTRSPHRSCGAACARVLSCGAHACRAPCHAPPCAACALQPASVLACPCGRTRSPHRSCGAACARVLSCGAHVCRAPCHAPPCAACALQPASVLACPCGRTRIPKDARKSCTDPIPLCGNICAKPLQCGPAGDMHFCKLDCHEGQCPVCPDKTLVACRCGHSSREILCAELPQMLDNVFCQKKCNKKLSCGRHRCRASCCAATTHRCGVVCGRMLACQLHRCEQFCHTGHCAPCDRASFEELTCECGAEVLLPPIPCGSKRPACSAPCRRPRPCEHPALHACHEGPCPPCVVLTAKRCHGQHEERKTIPCSQDEFSCGLPCGKPLPCGKHSCQKICHKGPCDAGKCTQPCNEKRPSCGHPCAAPCHSGGGDKGDKGDKCPSSAPCRKLVRAQCPCGRRTSERSCHENARDLAKIMSALAVSKMQEGGSVDLSEVQRPTAMLKTLECDDECRVEARTRRIALALQIRNPDVSAKLQPRYSDHVRALAAREPAFARQVHDKLTELVQLAKKQLLADVSAKLQPRYSDHVRALAAREPAFARQVHDKLTELVQLAKKQLLADVSAKLQPRYSDHVRALAAREPAFARQVHDKLTELVQLAKKQLLADVSAKLQPRYSDHVRALAAREPAFARQVHDKLTELVQLAKKQLLADVSAKLQPRYSDHVRALAAREPAFARQVHDKLTELVQLAKKQLLADVSAKLQPRYSDHVRALAAREPAFARQVHDKLTELVQLAKKQLLADVSAKLQPRYSDHVRALAAREPAFARQVHDKLTELVQLAKKQLLADVSAKLQPRYSDHVRALAAREPAFARQVHDKLTELVQLAKKQLLADVSAKLQPRYSDHVRALAAREPAFARQVHDKLTELVQLAKKSKQKTRAHSFPSCNWQKRQFIHELCEQFGCEGVAYDAEPNRNVVATADKEKSWLPAMSVLEVLARETGKRRVPGPVLRAPAPAPAASSTGNTKAASGWATLTSTNAWAARAHKAEQQQQQQQQQQQQQPARPKIDYFDNPPDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-