Ebru064712.1
Basic Information
- Insect
- Epinotia brunnichana
- Gene Symbol
- Zbtb8b
- Assembly
- GCA_963854355.1
- Location
- OY977961.1:17882049-17919521[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 34 0.0024 0.31 13.6 4.6 1 23 276 298 276 298 0.99 2 34 2.8 3.6e+02 3.9 1.2 1 23 305 327 305 327 0.95 3 34 2.8 3.6e+02 3.9 1.2 1 23 412 434 412 434 0.95 4 34 2.8 3.6e+02 3.9 1.2 1 23 551 573 551 573 0.95 5 34 0.64 82 5.9 0.3 1 23 577 600 577 600 0.98 6 34 0.65 83 5.9 7.2 1 23 607 629 607 630 0.96 7 34 9.9e-06 0.0013 21.1 0.3 2 23 636 657 636 657 0.97 8 34 0.00011 0.014 17.8 3.1 1 23 663 685 663 685 0.98 9 34 0.33 42 6.8 0.3 1 23 700 723 700 723 0.88 10 34 1.2 1.6e+02 5.0 0.2 1 23 729 752 729 752 0.94 11 34 1.2 1.6e+02 5.0 0.2 1 13 761 773 761 775 0.86 12 34 1.2 1.6e+02 5.0 0.2 1 13 804 816 804 818 0.86 13 34 1.2 1.6e+02 5.0 0.2 1 13 847 859 847 861 0.86 14 34 1.2 1.6e+02 5.0 0.2 1 13 890 902 890 904 0.86 15 34 1.2 1.6e+02 5.0 0.2 1 13 933 945 933 947 0.86 16 34 1.2 1.6e+02 5.0 0.2 1 13 976 988 976 990 0.86 17 34 1.2 1.6e+02 5.0 0.2 1 13 1019 1031 1019 1033 0.86 18 34 1.2 1.6e+02 5.0 0.2 1 13 1105 1117 1105 1119 0.86 19 34 0.77 99 5.7 1.2 1 20 1148 1167 1148 1169 0.87 20 34 1.2 1.6e+02 5.0 0.2 1 13 1209 1221 1209 1223 0.86 21 34 1.2 1.6e+02 5.0 0.2 1 13 1252 1264 1252 1266 0.86 22 34 1.2 1.6e+02 5.0 0.2 1 13 1295 1307 1295 1309 0.86 23 34 1.2 1.5e+02 5.1 0.2 1 13 1338 1350 1338 1353 0.86 24 34 1.2 1.5e+02 5.1 0.2 1 13 1381 1393 1381 1396 0.86 25 34 1.2 1.5e+02 5.1 0.2 1 13 1424 1436 1424 1439 0.86 26 34 1.2 1.5e+02 5.1 0.2 1 13 1467 1479 1467 1482 0.86 27 34 7.3 9.3e+02 2.6 3.3 1 21 1510 1532 1510 1535 0.68 28 34 9.8 1.2e+03 2.2 0.3 1 13 1544 1556 1544 1558 0.86 29 34 1.2 1.5e+02 5.1 0.2 1 13 1584 1596 1584 1599 0.86 30 34 9.8 1.2e+03 2.2 0.3 1 13 1627 1639 1627 1641 0.86 31 34 1.2 1.5e+02 5.1 0.2 1 13 1667 1679 1667 1682 0.86 32 34 1.2 1.5e+02 5.1 0.2 1 13 1710 1722 1710 1725 0.86 33 34 4.7e-05 0.006 18.9 1.9 1 23 1753 1775 1753 1775 0.98 34 34 0.0026 0.33 13.4 0.3 1 23 1781 1804 1781 1804 0.91
Sequence Information
- Coding Sequence
- ATGGAGGAATATACTTCTGAAATTGAAGATAAGTTCAAACCAGACCCTGAACCTGAAAAAACTATATGCAGATGTTGTTTAACAACAGAAAAGCGTATGTTCAGTATTTCGCTTTTCGTCTCACATTATTGGGATTTAGCAGGATTAAACGTATCAGAATCCGATGGACTCCCACCATGGTTGTGCCATGAGTGTGCAGGGCTGCTGCGTAAAGCAGTGCAGTTCAAACAGAAGCTTCTTAAAGCTAACTCAATGCTCTGCGACTATCTGATGAGATGTGCACCGTTCCCTATTGACGCAGACCCCGAGTTGTGCAAGTATGCGACGCCGAACCTCAGGGAAACCACCACTCTTGCCTTCGACAACAGCGGGAAGAAGCTGGGCTTCTACAAAACCTTAGAGGAGCCTTTCCAGCATGAGAAGCAGCTGGTAGACTCAGCCCTGGACACCATAGAGCtgccggccgcggccgcgggCCCCGCGGAGCCGGCCGCCGAACCGCTCAAGATGGAGTTCGACTCCTTCTCCGACTATGAGGACAACATTACGCTTGAGGAGTTCAGATCGACCGTGCCAAAGACGGAGACTGTTTTCCCCGACGAGAGCCTGGTCAAGCTAGAAGACagcaagaagaagaagaagcccAATAAGAAGGAACAGCCCAAGGCCAAGCGGAAGAAGACCAAAGAGCCGGCAGAAGGTGAAGAGCCCAAGAAGAGTATCAGAAAGACCGTGGAGTTGGACCCCACCAAGATAAGGATCGTCATGCTCAACCCGGAGGAGCAGTTCAAACAGAGCGAGgaaGAGAGCAAAGCCAAGTTCCCGTACCAATGTCACCTGTGTTACAAGGGATTCAATTTCGACACCAAATTGGAAAATCACATGCGGAAACACAGTCCATCGCGAGGCCCGTTCTCGTGCACGCTCTGCACCATGTACTTCCCGTCGGCGTACAGCCGCAGCGTGCACGCGCACATCCACACGCGCCGCTACGAGTGCCGCGCGTGCGGCCGCCGCATGACCGACAGGGCCTCCATACTCGACCACTACAGGTACAATGTGTTTGCAGTCGCGAGGCCCGTTCTCGTGCACGCTCTGCACCATGTACTTCCCGTCGGCGTACAGCCGCAGCGTGCACGCGCACATCCACACGCGCCGCTACGAGTGCCGCGCGTGCGGCCGCCGCATGACCGACAGGGCCTCCATACTCGACCACTACAGTCGCGAGGCCCGTTCTCGTGCACGCTCTGCACCATGTACTTCCCGTCGGCGTACAGCCGCAGCGTGCACGCGCACATCCACACGCGCCGCTACGAGTGCCGCGCGTGCGGCCGCCGCATGACCGACAGGGCCTCCATACTCGACCACTACAGCCGCAGCGTGCACGCGCACATCCACACGCGCCGCTACGAGTGCCGCGCGTGCGGCCGCCGCATGACCGACAGGGCCTCCATACTCGACCACTACAGGTACAATGTGTTTGCAGTCGCGAGGCCCGTTCTCGTGCACGCTCTGCACCATGTACTTCCCGTCGGCGTACAGCCGCAGCGTGCACGCGCACATCCACACGCGCCGCTACGAGTGCCGCGCGTGCGGCCGCCGCATGACCGACAGGGCCTCCATACTCGACCACTACAGTCGCGAGGCCCGTTCTCGTGCACGCTCTGCACCATGTACTTCCCGTCGGCGTACAGCCGCAGCGTGCACGCGCACATCCACACGCGCCGCTACGAGTGCCGCGCGTGCGGCCGCCGCATGACCGACAGGGCCTCCATACTCGACCACTACAGAACACAACACGAAGGCCTGGTGTCACACTTCACGTGTCATCTCTGTGGAAAGGTTTCTAATAATAGTAAAACCCACCGCGGCCACATGAGGAACCACCACAGCGGGCAGCGGCCCGAGTGCGAGCAGTGCGGCAAGACGTTCGTCAACAAGGACTCGCTCGAGGAACACAGGCAGATTCACCAAGGCATAAAGAACTACTCGTGCTCGGAGTGCGGCAAGCGGTTCCGAACGCGAACGCAGATCAAATACCATCAGCTCAAACACACCGACGTGAAGGAGTACTACTGCGTCGAGTGCGACGTCAGGTTCGCGTGCGCGCGTTGCGACAAGCGTTTCTCGTGCGCTGCTGCGCTGGCGCGGCACGCGGGCGTGCAGCACGATGGGCTGCGTCCGCACGCGTGTAACGCGTGCCCCGCCGCGCTCGCATCGCTTGCCTCGCTCGCCAAGCACCGCCGCCACGTGCACCAGGGCGCGCGGCCCGCCAAGCGCCACGTGTGCCACGCGTGCGGCAAGGCCTTCCGGGTGAGGGACTACAAACTATACACACAGCTcgcctcgcgcgcctcgctcGCCAAGCACCCCCGCCACGTGCACCAGGGCGCGCGGCCCGCCAAGCGCCACGTGTGCCACGCGTGCGGCAAGGCCTTCCGGGTGAGGGACTACAAACTATACACACAGCTCGCCTCGCGCGCTTCGCTCGCCAAGCACCCCCGCCACGTGCACCAGGGCGCGCGGCCCGCCAAGCGCCACGTGTGCCACGCGTGCGGCAAGGCCTTCCGGGTGAGGGACTACAAACTATACACACAGCTcgcctcgcgcgcctcgctcGCCAAGCACCGCCGCCACGTGCACCAGGGCGCGCGGCCCGCCAAGCGCCACGTGTGCCACGCGTGCGGCAAGGCCTTCCGGGTGAGGGACTACAAACTATACACACAGCTcgcctcgcgcgcctcgctcGCCAAGCACCCCCGCCACGTGCACCAGGGCGCGCGGCCCGCCAAGCGCCACGTGTGCCACGCGTGCGGCAAGGCCTTCCGGGTGAGGGACTACAAACTATACACACAGCTCGCCTCGCGCGCTTCGCTCGCCAAGCACCCCCGCCACGTGCACCAGGGCGCGCGGCCCGCCAAGCGCCACGTGTGCCACGCGTGCGGCAAGGCCTTCCGGGTGAGGGACTACAAACTATACACACAGCTcgcctcgcgcgcctcgctcGCCAAGCACCGCCGCCACGTGCACCAGGGCGCGCGGCCCGCCAAGCGCCACGTGTGCCACGCGTGCGGCAAGGCCTTCCGGGTGAGGGACTACAAACTATACACACAGCTcgcctcgcgcgcctcgctcGCCAAGCACCGCCGCCACGTGCACCAGGGCGCGCGGCCCGCCAAGCGCCACGTGTGCCACGCGTGCGGCAAGGCCTTCCTGGTGAGGGACTACAAACTATACACACAGCTcgcctcgcgcgcctcgctcGCCAAGCACCGCCGCCACGTGCACCAGGGCGCGCGGCCCGCCAAACGCCACGTGTGCCACGCGTGCGGCAAGGCCTTCCGGGTGAGGGACTACAAACTATACACACAGCTcgcctcgcgcgcctcgctcGCCAGGCACCGCCGCCACGTGCACCAGGGCGCGCGGCCCACCAAGCGCCACGTGTGCCACGCGTGCGGCAAAGCCTTCCGGGGCGCGCGGCCCGCCAAGCGCCACGTGTGCCACGCGTGCGGCAAGGCCTTCTGGGTGAGGGACTACAAACTATACACACAGCTcgcctcgcgcgcctcgctcGCCAAGCACCACCGCCACGTGCACCAGGGCGCGCGGCCCGCCAAGCGCCACGTGTGCCACGCGTGCGGCAAGGCCTTCCGGGTGAGGGACTACAAACTATACACGCAGCTcgcctcgcgcgcctcgctcGCCAAGCACCGCCGCCACGTGCACCAGGGCGCGCGGCCCGCCAAGCGCCACGTGTGCCACGCGTGCGGCAAAGCCTTCCGGGTGAGGGACTACAAACTATACACACAGCTCGCCTCGCGCGCTTCGCTCGCCAAGCACCGCCGCCACGTGCACCAGGGCGCGCGGCCCGCCAAGCGCCACGTGTGCCACGCGTGCGGCAAAGCCTTCCGGGTGAGGGACTACAAACTATACACACAGCTCGCCTCGCGCGCTTCGCTCGCCAAACACCGCCGCCACGTGCACCAGGGCGCGCGGCCCGCCAAGCGCCACGTGTGCCACGCGTGCGGCAAGGCCTTCCGGGTGAGGGACTACACACTATACACACAGCTCGCCTCGCGCGCCTTGCTCGCCAAGCACCCCCGCCACGTGCACCAGGGCGTGCGGCCCGCCAAGCGCCACGTGTGCCACGCGTGCGGCAAGGCCTTCCGGGTGAGGGACTACACACTATACACACAGCTCGCCTCGCGCGCTTCGCTCGCCAAGCACCCCCGCCACGTGCACCAGGGCGCGCGGCCCGCCAAGCGCCACGTGTGCCACGCGTGCGGCAAGGCCTTCCGGGTGAGGGACTACACACTATACACACAGCTCGCCTCGCGCGCTTCGCTCGCCAAACACCGCCGCCACGTGTACCAGGGCGCGCGATCCGCCAAGCGCCACGTGTGCCACGCGTGCGGTAAGGCCTTCCGGGTGAGGGACTACACACTATACACACAGCTcgcctcgcgcgcctcgctcGCCAAGCACCGCCGCCATGTGCACCAGGGCGCGCGGCCCGCCAAGCGCCACGTGTGCCACGCGTGCGGCAAGGCCTTCCGGCTcgcctcgcgcgcctcgctcGCCAAGCACCGCTGCCACGTGCACCAGGGCGCGCGGCCCGCCAAGCGCCACGTGTGCCACGCGTGCAGCAAGGCCTTCCGGGTGAGGGACTACACACTATACACACAGCTCGCCTCGCGCGCCAAGCACCGCTGCCACGTGCACCAGGGCGCGCGGCCCGCCAAGCGCCACGTGTGCCACGCGTGCGGCAAGGCCTTCCGGGTGAGGGACTACACACTATACACACAGCTcgcctcgcgcgcctcgctcGCCAAGCACCGCTGCCACGTGCACCAGGGCGCGCGGCCAGCCAAGCGCCACGTGTGCCACGCGTGCAGCAAGGCCTTCCGGGTGAGGGACTACACACTATACACACAGCTCGCCTCGCGCGCCAAGCACCGCTGCCACGTGCACCAGGGCGCGCGGCCCGCCAAGCGCCACGTGTGCCACGCGTGCGGCAAGGCCTTCCGGGTGAGGGACTACACACTATACACACAGCTcgcctcgcgcgcctcgctcGCCAAGCACCGCTGCCACGTGCACCAGGGCGCGCTGCCCGCCAAGCGCCACGTGTGCCACGCGTGCGGCAAGGCCTTCCGGGTGAGGGACTACACACTATACACACAGCTcgcctcgcgcgcctcgctcGCCAAGCACCGCTGCCACGTGCACCAGGGCGCGCGGCCCGCCAAGCGCCACGTGTGCCACGCGTGCGGCAAGGCCTTCCGGGGCAAGTCGGTGCTGGTGAACCACATGCGCACGCACACGGGCGAGAAGCCGTTCCCGTGCGCGACGTGCGGCCGCAAGTTCTCGCAGCGCACCGCCATGCGCACGCACGTCGACCTCGTGCACCTCAAGCGGCGCCGCGGGAAGGCGAAACAGGAGCCCTGCGCCCCCTCGGAGCCGAAGGTGGACCTGTTCACCAAGGAGGAGCCGTCGGGGCTGGACGCGTGGCGCCCAAGCGCCTGCGAGCTCTACTTCACCGTCACCGCGGGGCCCTAG
- Protein Sequence
- MEEYTSEIEDKFKPDPEPEKTICRCCLTTEKRMFSISLFVSHYWDLAGLNVSESDGLPPWLCHECAGLLRKAVQFKQKLLKANSMLCDYLMRCAPFPIDADPELCKYATPNLRETTTLAFDNSGKKLGFYKTLEEPFQHEKQLVDSALDTIELPAAAAGPAEPAAEPLKMEFDSFSDYEDNITLEEFRSTVPKTETVFPDESLVKLEDSKKKKKPNKKEQPKAKRKKTKEPAEGEEPKKSIRKTVELDPTKIRIVMLNPEEQFKQSEEESKAKFPYQCHLCYKGFNFDTKLENHMRKHSPSRGPFSCTLCTMYFPSAYSRSVHAHIHTRRYECRACGRRMTDRASILDHYRYNVFAVARPVLVHALHHVLPVGVQPQRARAHPHAPLRVPRVRPPHDRQGLHTRPLQSRGPFSCTLCTMYFPSAYSRSVHAHIHTRRYECRACGRRMTDRASILDHYSRSVHAHIHTRRYECRACGRRMTDRASILDHYRYNVFAVARPVLVHALHHVLPVGVQPQRARAHPHAPLRVPRVRPPHDRQGLHTRPLQSRGPFSCTLCTMYFPSAYSRSVHAHIHTRRYECRACGRRMTDRASILDHYRTQHEGLVSHFTCHLCGKVSNNSKTHRGHMRNHHSGQRPECEQCGKTFVNKDSLEEHRQIHQGIKNYSCSECGKRFRTRTQIKYHQLKHTDVKEYYCVECDVRFACARCDKRFSCAAALARHAGVQHDGLRPHACNACPAALASLASLAKHRRHVHQGARPAKRHVCHACGKAFRVRDYKLYTQLASRASLAKHPRHVHQGARPAKRHVCHACGKAFRVRDYKLYTQLASRASLAKHPRHVHQGARPAKRHVCHACGKAFRVRDYKLYTQLASRASLAKHRRHVHQGARPAKRHVCHACGKAFRVRDYKLYTQLASRASLAKHPRHVHQGARPAKRHVCHACGKAFRVRDYKLYTQLASRASLAKHPRHVHQGARPAKRHVCHACGKAFRVRDYKLYTQLASRASLAKHRRHVHQGARPAKRHVCHACGKAFRVRDYKLYTQLASRASLAKHRRHVHQGARPAKRHVCHACGKAFLVRDYKLYTQLASRASLAKHRRHVHQGARPAKRHVCHACGKAFRVRDYKLYTQLASRASLARHRRHVHQGARPTKRHVCHACGKAFRGARPAKRHVCHACGKAFWVRDYKLYTQLASRASLAKHHRHVHQGARPAKRHVCHACGKAFRVRDYKLYTQLASRASLAKHRRHVHQGARPAKRHVCHACGKAFRVRDYKLYTQLASRASLAKHRRHVHQGARPAKRHVCHACGKAFRVRDYKLYTQLASRASLAKHRRHVHQGARPAKRHVCHACGKAFRVRDYTLYTQLASRALLAKHPRHVHQGVRPAKRHVCHACGKAFRVRDYTLYTQLASRASLAKHPRHVHQGARPAKRHVCHACGKAFRVRDYTLYTQLASRASLAKHRRHVYQGARSAKRHVCHACGKAFRVRDYTLYTQLASRASLAKHRRHVHQGARPAKRHVCHACGKAFRLASRASLAKHRCHVHQGARPAKRHVCHACSKAFRVRDYTLYTQLASRAKHRCHVHQGARPAKRHVCHACGKAFRVRDYTLYTQLASRASLAKHRCHVHQGARPAKRHVCHACSKAFRVRDYTLYTQLASRAKHRCHVHQGARPAKRHVCHACGKAFRVRDYTLYTQLASRASLAKHRCHVHQGALPAKRHVCHACGKAFRVRDYTLYTQLASRASLAKHRCHVHQGARPAKRHVCHACGKAFRGKSVLVNHMRTHTGEKPFPCATCGRKFSQRTAMRTHVDLVHLKRRRGKAKQEPCAPSEPKVDLFTKEEPSGLDAWRPSACELYFTVTAGP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00658024;
- 90% Identity
- iTF_00658024;
- 80% Identity
- iTF_00658024;