Ebru054910.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Epinotia brunnichana
Gene Symbol
-
Assembly
GCA_963854355.1
Location
OY977956.1:2848719-2882550[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 8.8 1.1e+03 2.3 2.9 2 23 423 443 422 444 0.87
2 17 0.31 39 6.9 0.9 1 23 479 502 479 502 0.95
3 17 0.034 4.3 10.0 2.0 2 23 509 531 508 531 0.93
4 17 0.21 26 7.5 1.1 3 23 542 563 541 563 0.88
5 17 0.21 26 7.5 1.1 3 23 633 654 632 654 0.88
6 17 0.21 26 7.5 1.1 3 23 724 745 723 745 0.88
7 17 0.21 26 7.5 1.1 3 23 815 836 814 836 0.88
8 17 0.21 26 7.5 1.1 3 23 906 927 905 927 0.88
9 17 0.12 16 8.2 1.1 3 23 997 1018 996 1018 0.88
10 17 0.21 26 7.5 1.1 3 23 1179 1200 1178 1200 0.88
11 17 0.12 16 8.2 1.1 3 23 1270 1291 1269 1291 0.88
12 17 0.12 16 8.2 1.1 3 23 1361 1382 1360 1382 0.88
13 17 0.21 26 7.5 1.1 3 23 1543 1564 1542 1564 0.88
14 17 0.21 26 7.5 1.1 3 23 1634 1655 1633 1655 0.88
15 17 0.21 26 7.5 1.1 3 23 1725 1746 1724 1746 0.88
16 17 0.00028 0.036 16.5 0.1 1 23 1753 1776 1753 1776 0.95
17 17 0.0076 0.97 12.0 2.3 1 23 1807 1830 1807 1830 0.96

Sequence Information

Coding Sequence
ATGTTTGAAACAAAAGACACAAAACTATGCCGGGGCTGCCTCAGCTCGGACAGGAAGCTCTCATCTGTATCTGCCGGTGATTTAAATTTGTTTAATTCTCTTTTGGCGGAAGACCGAAAACTGGATGCACTAAGTATACCAGGCCTCGATCTATGTTGGGAATGTGTGGCTATGCTGCGCCGGATTCGGATATTTCGGGAACGGGTTCGACGGGCACACACAATACTGGAAGACTCCTTAGGACTTCCTACAGGAAAAGCTACATTGTCTTCACTTACTATCCAACAGAAACTAGAATATGATGTTATATTTGAGGAAACTGAACCAAATGATCAACCATTATTTTTTAAAACGAAACTGTATGATATTACTGTTGAAAATATTGTCATACCTACAAAATACAAAGCACTTGTTCCAGAAAATGCGAAAAACTTCAAAGATGAACGCAATGATGATTTAACAAAGATCGactatgataatgatgaaacaGGAAATATGAGTGACGACAGTGACGATCACGAGAATGTTAATGCCTGTGATAGTCGACCTAGTTCACCAGagataactataaaaaaaataactccaCTAAAAAAGTTACAAgatgtaaaaataattaaacactCAAATTTGAGTGATGAGAAACCTAAAGGCAGAGCTCAGTTACAGGCTAAACGCAAATTTATAAACAGACctgtaaaatattcaaaatatgCTCCTGCTATTGTTAAAACTCCAGTAATAGCAAAACTGGAACTGGAACTACAAAAATTGAtgcaaaatgcaaaaaaatctGCGCAACATGTAACTCCCCAGCAAAACACGTCTAAACaaaagaaaccaaaaaaagaaaCTATAACTAGCCATGAAAATGCAGGATCTTCAAATGATATTGCTGAAAACAATGATGGTGAAGATGATTCGAAAAGTAGTGCAAAGGATGATGCTTCAAATGATGATCTTAATGAATCTATAAATAAAAGAGTTAAACCAGATTTGGATCCTGATTTCAGTCTAGAAGTTGATAGTGATTCAGATCAAAAAATCGAAATGAGTGTGGACgatttaaaaagttatttaGAGAGGCAGGACGCCATTGTTGATGAAAAGAAACCGCATGATTGTAGTATTTGCGGCCAGCGATTCCAACTACACAGAATTTTGACGAACCATGCACTAAGATGTCACAAAGCAactCATCCCGCACAATTCAGAAAAGGAAGCTTCTATAATCCACCGCCCACCATGCCTGAGAAACCCATTCTCTGGCGCTGCAGTGTGTGCACAACTATGGTACGGCGAGagcacacacttacacacatgAATGTACACCACCGTACCCAGTACTACTGCAACGGACAGGGATGCGAGTGGTCTTTGAAGGGATTTTGGATAAAGGAGGACTTTGTCGAGCACTGGGCCGCCATCCACAAGCGGTTCACCTGTGACATCTGCAGGAAACGCAAGACGAAAAAATCTGCGATGGAGTTACACATAATGGAAACCCATCTCCGCGTACCAAAGCAGCAATGCCCTCACTGCACCCGCATCTACGTCCATCGCAAAGCGTTGCTCCAGCACGTGGCCAACCGTCACTCGGGCCCCGAGCCCGCCGAGCTCCGGTACTGCGTCGAGTGTGACGTCACCTTCAACACCGTCGCCTGTCTGCAGAAACACTTCTATAATATACACAACGAGGCCAGGGAGAACACGTGGCCAACCGTCACTCGGGCCCCGAGCCCGCCGAGCTCCGGTACTGCGTCGAGTGTGACGTCACCTTCAACACCGTCGCCTGTCTGCAGAAACACTTCTATAATATACACAACGAGGCCAGGGAGAACGTTGCTCCAGCACGTGGCCAACCGTCACTCGGGCCCCGAGCCCGCCGAGCTCCGGTACTGCGTCGAGTGTGACGTCACCTTCAACACCGTCGCCTGTCTGCAGAAACACTTCTATAATATACACAACGAGGCCATGGAGAACACGTGGCCAACCGTCACTCGGGCCCCGAGCCCGCCGAGCTCCGGTACTGCGTCGAGTGTGACGTCACCTTCAACACCGTCGCCTGTCTGCAGAAACACTTCTATAATATACACAACGAGGCCAGGGAGAACGTTGCTCCAGCACGTGGCCAACCGTCACTCGGGCCCCGAGCCCGCCGAGCTCCGGTACTGCGTCGAGTGTGACGTCACCTTCAACACCGTCGCCTGTCTGCAGAAACACTTCTATAATATACACAACGAGGCCATGGAGAACACGTGGCCAACCGTCACTCGGGCCCCGAGCCCGCCGAGCTCCGGTACTGCGTCGAGTGTGACGTCACCTTCAACACCGTCGCCTGTCTGCAGAAACACTTCTATAATATACACAACGAGGCCAGGGAGAACGTTGCTCCAGCACGTGGCCAACCGTCACTCGGGCCCCGAGCCCGCCGAGCTCCGGTACTGCGTCGAGTGTGACGTCACCTTCAACACCGTCGCCTGTCTGCAGAAACACTTCTATAATATACACAACGAGGCCATGGAGAACACGTGGCCAACCGTCACTCGGGCCCCGAGCCCGCCGAGCTCCGGTACTGCGTCGAGTGTGACGTCACCTTCAACACCGTCGCCTGTCTGCAGAAACACTTCTATAATATACACAACGAGGCCAGGGAGAACGTTGCTCCAGCACGTGGCCAACCGTCACTCGGGCCCCGAGCCCGCCGAGCTCCGGTACTGCGTCGAGTGTGACGTCACCTTCAACACCGTCGCCTGTCTGCAGAAACACTTCTATAATATACACAACGAGGCCAGGGAGAACACGTGGCCAACCGTCACTCGGGCCCCGAGCCCGCCGAGCTCCGGTACTGCGTCGAGTGTGACGTCACCTTCAACACCGTCGCCTGTCTGCAGAAACACTTCTATAATATACACAACGAGGCCAGGGAGAACGTTGCTCCAGCACGTGGCCAACCGTCACTCGGGCCCCGAGCCCGCCGAGCTCCGGTACTGCGTCGAGTGTGACATCACCTTCAACACCGTCGCCTGTCTGCAGAAACACTTCTATAATATACACAACGAGGCCAGGGAGAACACGTGGCCAACCGTCACTCGGGCCCCGAGCCCGCCGAGCTCCGGTACTGCGTCGAGTGTGACGTCACCTTCAACACCGTCGCCTGTCTGCAGAAACACTTCTATAATATACACAACGAGGCCAGGGAGAACGTTGCTCCAGCACGTGGCCAACCGTCACTCGGGCCCCGAGCCCGCCGAGCTCCGGTACTGCGTCGAGTTTGACGTCACCTTCAACACCGTCGCCTGTCTGCAGAAACACTTCTATAATATACACAACGAGGCCAGGGAGAACACGTGGCCAACCGTCACTCGGGCCCCGAGCCCGCCGAGCTCCGGTACTGCGTCGAGTGTGACGTCACCTTCAACACCGTCGCCTGTCTGCAGAAACACTTCTATAATATACACAACGAGGCCAGGGAGAACGTTGCTCCAGCACGTGGCCAACCGTCACTCGGGCCCCGAGCCCGCCGAGCTCCGGTACTGCGTCGAGTGTGACGTCACCTTCAACACCGTCGCCTGTCTGCAGAAACACTTCTATAATATACACAACGAGGCCATGGAGAACACGTGGCCAACCGTCACTCGGGCCCCGAGCCCGCCGAGCTCCGGTACTGCGTCGAGTGTGACGTCACCTTCAACACCGTCGCCTGTCTGCAGAAACACTTCTATAATATACACAACGAGGCCAGGGAGAACGTTGCTCCAGCACGTGGCCAACCGTCACTCGGGCCCCGAGCCCGCCGAGCTCCGGTACTGCGTCGAGTGTGACATCACCTTCAACACCGTCGCCTGTCTGCAGAAACACTTCTATAATATACACAACGAGGCCAGGGAGAACACGTGGCCAACCGTCACTCGGGCCCCGAGCCCGCCGAGCTCCGGTACTGCGTCGAGTGTGACGTCACCTTCAACACCGTCGCCTGTCTGCAGAAACACTTCTATAATATACACAACGAGGCCAGGGAGAACGTTGCTCCAGCACGTGGCCAACCGTCACTCGGGCCCCGAGCCCGCCGAGCTCCGGTACTGCGTCGAGTGTGACATCACCTTCAACACCGTCGCCTGTCTGCAGAAACACTTCTATAATATACACAACGAGGCCAGGGAGAACACGTGGCCAACCGTCACTCGGGCCCCGAGCCCGCCGAGCTCCGGTACTGCGTCGAGTGTGACGTCACCTTCAACACCGTCGCCTGTCTGCAGAAACACTTCTATAATATACACAACGAGGCCAGGGAGAACGTTGCTCCAGCACGTGGCCAACCGTCACTCGGGCCCCGAGCCCGCCGAGCTCCGGTACTGCGTCGAGTTTGACGTCACCTTCAACACCGTCGCCTGTCTGCAGAAACACTTCTATAATATACACAACGAGGCCAGGGAGAACACGTGGCCAACCGTCACTCGGGCCCCGAGCCCGCCGAGCTCCGGTACTGCGTCGAGTGTGACGTCACCTTCAACACCGTCGCCTGTCTGCAGAAACACTTCTATAATATACACAACGAGGCCAGGGAGAACGTTGCTCCAGCACGTGGCCAACCGTCACTCGGGCCCCGAGCCCGCCGAGCTCCGGTACTGCGTCGAGTGTGACGTCACCTTCAACACCGTCGCCTGTCTGCAGAAACACTTCTATAATATACACAACGAGGCCATGGAGAACACGTGGCCAACCGTCACTCGGGCCCCGAGCCCGCCGAGCTCCGGTACTGCGTCGAGTGTGACGTCACCTTCAACACCGTCGCCTGTCTGCAGAAACACTTCTATAATATACACAACGAGGCCAGGGAGAACGTTGCTCCAGCACGTGGCCAACCGTCACTCGGGCCCCGAGCCCGCCGAGCTCCGGTACTGCGTCGAGTGTGACGTCACCTTCAACACCGTCGCCTGTCTGCAGAAACACTTCTATAATATACACAACGAGGCCAGGGAGAACACGTGGCCAACCGTCACTCGGGCCCCGAGCCCGCCGAGCTCCGGTACTGCGTCGAGTGTGACGTCACCTTCAACACCGTCGCCTGTCTGCAGAAACACTTCTATAATATACACAACGAGGCCAGGGAGAACGTTGCTCCAGCACGTGGCCAACCGTCACTCGGGCCCCGAGCCCGCCGAGCTCCGGTACTGCGTCGAGTGTGACGTCACCTTCAACACCGTCGCCTGTCTGCAGAAACACTTCTATAATATACACAACGAGGCCAGGGAGAAGTTTCCATGCCCGGATTGCGGTCGGGTGCTGGCCACCAGGGACTCATACCAAAACCACTATAACCTCATCCACACAGGCAAGACGAACCACCGCTGCCACGTATGTGGAAAGACCAACAGAACTCTGCGGCAGCACATCTACACGCACACAGGCGAGCGGCCGTACGCGTGTTGGCACTGCGACGCCGCGTACACGCAGCCGCACTGTCTGCGCGTGCACCTCGCGCGCAGCCACgacgtgcgcgcgcgcgtgccgcACGTGCCCGGGAAGAGGGTAGCGGCCACCCGCGCAACCACACACGAAAATTAG
Protein Sequence
MFETKDTKLCRGCLSSDRKLSSVSAGDLNLFNSLLAEDRKLDALSIPGLDLCWECVAMLRRIRIFRERVRRAHTILEDSLGLPTGKATLSSLTIQQKLEYDVIFEETEPNDQPLFFKTKLYDITVENIVIPTKYKALVPENAKNFKDERNDDLTKIDYDNDETGNMSDDSDDHENVNACDSRPSSPEITIKKITPLKKLQDVKIIKHSNLSDEKPKGRAQLQAKRKFINRPVKYSKYAPAIVKTPVIAKLELELQKLMQNAKKSAQHVTPQQNTSKQKKPKKETITSHENAGSSNDIAENNDGEDDSKSSAKDDASNDDLNESINKRVKPDLDPDFSLEVDSDSDQKIEMSVDDLKSYLERQDAIVDEKKPHDCSICGQRFQLHRILTNHALRCHKATHPAQFRKGSFYNPPPTMPEKPILWRCSVCTTMVRREHTLTHMNVHHRTQYYCNGQGCEWSLKGFWIKEDFVEHWAAIHKRFTCDICRKRKTKKSAMELHIMETHLRVPKQQCPHCTRIYVHRKALLQHVANRHSGPEPAELRYCVECDVTFNTVACLQKHFYNIHNEARENTWPTVTRAPSPPSSGTASSVTSPSTPSPVCRNTSIIYTTRPGRTLLQHVANRHSGPEPAELRYCVECDVTFNTVACLQKHFYNIHNEAMENTWPTVTRAPSPPSSGTASSVTSPSTPSPVCRNTSIIYTTRPGRTLLQHVANRHSGPEPAELRYCVECDVTFNTVACLQKHFYNIHNEAMENTWPTVTRAPSPPSSGTASSVTSPSTPSPVCRNTSIIYTTRPGRTLLQHVANRHSGPEPAELRYCVECDVTFNTVACLQKHFYNIHNEAMENTWPTVTRAPSPPSSGTASSVTSPSTPSPVCRNTSIIYTTRPGRTLLQHVANRHSGPEPAELRYCVECDVTFNTVACLQKHFYNIHNEARENTWPTVTRAPSPPSSGTASSVTSPSTPSPVCRNTSIIYTTRPGRTLLQHVANRHSGPEPAELRYCVECDITFNTVACLQKHFYNIHNEARENTWPTVTRAPSPPSSGTASSVTSPSTPSPVCRNTSIIYTTRPGRTLLQHVANRHSGPEPAELRYCVEFDVTFNTVACLQKHFYNIHNEARENTWPTVTRAPSPPSSGTASSVTSPSTPSPVCRNTSIIYTTRPGRTLLQHVANRHSGPEPAELRYCVECDVTFNTVACLQKHFYNIHNEAMENTWPTVTRAPSPPSSGTASSVTSPSTPSPVCRNTSIIYTTRPGRTLLQHVANRHSGPEPAELRYCVECDITFNTVACLQKHFYNIHNEARENTWPTVTRAPSPPSSGTASSVTSPSTPSPVCRNTSIIYTTRPGRTLLQHVANRHSGPEPAELRYCVECDITFNTVACLQKHFYNIHNEARENTWPTVTRAPSPPSSGTASSVTSPSTPSPVCRNTSIIYTTRPGRTLLQHVANRHSGPEPAELRYCVEFDVTFNTVACLQKHFYNIHNEARENTWPTVTRAPSPPSSGTASSVTSPSTPSPVCRNTSIIYTTRPGRTLLQHVANRHSGPEPAELRYCVECDVTFNTVACLQKHFYNIHNEAMENTWPTVTRAPSPPSSGTASSVTSPSTPSPVCRNTSIIYTTRPGRTLLQHVANRHSGPEPAELRYCVECDVTFNTVACLQKHFYNIHNEARENTWPTVTRAPSPPSSGTASSVTSPSTPSPVCRNTSIIYTTRPGRTLLQHVANRHSGPEPAELRYCVECDVTFNTVACLQKHFYNIHNEAREKFPCPDCGRVLATRDSYQNHYNLIHTGKTNHRCHVCGKTNRTLRQHIYTHTGERPYACWHCDAAYTQPHCLRVHLARSHDVRARVPHVPGKRVAATRATTHEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-