Basic Information

Insect: Epinotia brunnichana
Gene Symbol: -
Assembly: GCA_963854355.1
Location: OY977962.1:9071623-9093115[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.12 15 8.2 0.0 2 23 474 495 473 495 0.93

2 9 0.13 17 8.1 0.1 1 23 505 528 505 528 0.95

3 9 0.48 61 6.3 4.0 2 23 884 905 883 905 0.95

4 9 6.9 8.9e+02 2.7 0.4 1 23 917 941 917 941 0.89

5 9 0.00013 0.017 17.6 1.6 1 23 947 971 947 971 0.98

6 9 0.17 21 7.8 0.2 1 23 977 999 977 999 0.93

7 9 0.0011 0.14 14.6 3.3 1 23 1005 1027 1005 1027 0.98

8 9 0.047 6 9.5 0.2 1 23 1133 1155 1133 1155 0.97

9 9 5.3 6.7e+02 3.1 7.2 1 23 1162 1184 1162 1184 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.12	15	8.2	0.0	2	23	474	495	473	495	0.93
2	9	0.13	17	8.1	0.1	1	23	505	528	505	528	0.95
3	9	0.48	61	6.3	4.0	2	23	884	905	883	905	0.95
4	9	6.9	8.9e+02	2.7	0.4	1	23	917	941	917	941	0.89
5	9	0.00013	0.017	17.6	1.6	1	23	947	971	947	971	0.98
6	9	0.17	21	7.8	0.2	1	23	977	999	977	999	0.93
7	9	0.0011	0.14	14.6	3.3	1	23	1005	1027	1005	1027	0.98
8	9	0.047	6	9.5	0.2	1	23	1133	1155	1133	1155	0.97
9	9	5.3	6.7e+02	3.1	7.2	1	23	1162	1184	1162	1184	0.95

Sequence Information

Coding Sequence: ATGTCTTGGCCTCCAACAGGAGTGCACGCCACTGATCCCGATGCTGAGTGTGCATTACTTGGCTACGAAGTAGACCTAAATTCACTGACCAGAAACAAGCCAGTTGCACTAACCGACAACATATACCAATTCCTGATAAATGCCGAAAATAACCTGTTAGAGTATCCTATGGGCTCGCAAATGTTCGACCAAATGTTGGAGCCAAATGACACAGACGGGCTTGTATATGTTCTAGACGATGGAACACAAATAAAAGCTTCTCAGATACATTTTGACAATGAGGATCCTCCTTTTGACTTTATAGCGGAGAAGATTCCTTTCGTCAAGTATATAGACGATGATAATGATGACATAGAACCATCAAGCGAAGTTAGCACGAAAATGATTAATATAACAGCAAGTCCTGTGTCAAAATGGCCAAGCAACGCTAGTCCTAAGAAACCTTTCATCAACAGTGTCCCTTTTAAACTCGTTAATAACACTGGTTTCAACGCTCAATTCACCAAATTCTTGGAATCTAATATGGACAAGACATTTACACCTCTAAACACAGTCACAGCCAGAAACAAGTCACCTAGAAGTCTAATCCGGGACAATTATAAGAAATACGAAGACAACATTTACAACAAGAATGAATGTATAACTCGAGATGAAGTCCTAAATATGTTTAAAGATACCCCCGTAGTACCTTATGAGACCCAAAGCTTCAACGATAAGAGGAGGCATGTACGAAAGAGCGATCCTTCCCGGCCTACTAACCATAAGACTACTTCCAAACCAATGCCGTACATAGACGATGACGGGACTTTAATAGGCCAGAATGAGAACCAAAACTGTTTCATCTGCGAGAAATTTGTCGACAACAACATGGACAAGCTATATCTCTTTGACAATGAAGATCAGAAGCTACACAGGTCTTCTCCACAGAAGAAATTATCGACACAACTCAAAATAATCTGCGAACAATGCTTAGACAACAATTTTAAACCCTCAAGACTGAAGAGTCCCAGTAAAAGTCTGAACCCGGACGAATATTTAGTCATCAGAAACAATCAGCAATACATTTTCCAGAAAACAAATTCCATagatttcaaaaatattcgaGGTGGTTTCGTGAACATTGGTGAAGCGACAGCTATCATTGACAAGATAGAGACCGAAATACTAAAAGGGAATCAGGTGAAGCAAACGGATTTTGTTAAAGTTGAGGTTGGTTCAAACGGAGAGATTATATCTAAGGACGATAAGAAAGAGGCAAATGCAGAAACGTATTGTTTTATACAGGGCAGCTCTAGTGACGTGGAGATCATAGAGGGGCCGGAAATAGACGATGCCATAGACAATTTGGAGGAAGCGGATGAGGAGGTGAAGGAGTTTTTGGGGATGTATCAGGGTGATAGTAATGCTAGTAGCGAACTGAAATGCAGATTTTGCGAGCGCGTTTTCGCCGATCTCCCAGAGTTGATGGAACACGGCGACGTACATAAACACGTCACTGAGGATGGAGAGGTGTACCCTTGCCCGCTCTGTTTTTATGGCTACGCCAACTTCAAGTGGCTGAAAGGCCACCTGAAGGCAGCCCATGACAAGTCAAACAAGCCTCAAGCAGAAAGCAATAACGACGGAGCCAAGGATGGTAAGCTAATTTTTCCAGGCTACGCCAACTTCAAGTGGCTGAAAGGCCACCTGGAGGCAGCCCATTTCAAGTCAAACAAGCCTCAAGCAGAAAGCAATAACGAAGGAGCCAAGGATGGTAAGCTAATTTTTCCAGGCTACGCCAACTTCAAGTGGCTGAAAGGCCACCTGAAGGCAGCCCATGTCACGTCAAACAAGCCTCAAGCAGAAAGCAATAACAACGGAGCCAAGGATGGTAAGCTAATTTTTCCAGGCTACGCCAACTTCAAGTGGCTGAAAGGCCACCTGAAGGCAGCCCATGACAAGTCAAACAAGCCTCAAGCAGAAAGCAATAACGACGGAGCCAAGGATGGTAAGCTCATTTTTCCAGGCCACGCCAACTTCAAGTGGCTGAAAGGCCACCTGAAGGCAGCCCATGACAAGTCAAACAAGCCTCAAGCAGAAACCAATAACGACGGAGCCAAGGATGATGCTACTCAGTCTGAGTTGTCTCCAGTTGCCAAAAGGACTAGAAGCAACAATACAAAGAAGGAGGTACAAAAAGATGACTCGACCAAGTTTGAAGATGATAAACCTGCAAATGTGGATACTGAAAATGGTAAACAAGAATGTACTATGGAGATAAAGTTAGAGGTCAAACAAGAGGTCCTGGAAACCAGTGACGAGGAGGCGATCTGGATTGTGCACACTGATGATGCGTCGGCCGACCAGCTGCACTCCTTACTacatAGCAACGAGAAAAGCGAAGAGATAGTGTTCAAGAAACCACAGAAATGTGCCAAATGCAGCCAAATCATGGTGGACGTGTCAACGCATAAGTGCAAAAAACGCGGCCGAAAGCGAAAGTGCTTGAACAAGGACGAAAATGGCACATTCTCGGGCTCTCAGAAGGAGACGGTAAAAAGAGCACCAGGTAGACCGAGACAGTATGTGGATTCGGGCGACAATGATTTGCTGGTACCTAGACCCCGTAAGAAGAAAACAACAGAATTAACATCAGATCCCCAGATTATGACATGTCATAATTGCAACGAATCTTACACATCCAAAGTTCGTTTGAAGTTCCACATGCAATTCCACGACAGCACAGAAATGTTAACAACATCCGGTCAATACACTTGCCTGGAGTGTCCGGGCGTGACGTTCGCGCAGGAGACAGAGTTATTCGACCACGTGCACTTTCAGCACAACAAACAGAACCACTACCAGTGCTCCGTCAAAGACTGCGGGAAGACCTTCTTCCTCAGGGCGTCGTTGACAAAGCACAGCCGCACGCACACGGACACGCGACGCTACATATGCGGCACTTGCGGGAAACGATTTCTGGACAAGCAGACGTTGGATGAACATGGAGTCACTCACCTGCAGATCAAGCCATACCAGTGCCACATCTGCCTGAAGCAGCTGACGCGGCGCTCGCGGCTGCGCATGCACATGCGCGCGCACGAGGAGGCGCTGTGCCCCGCGCTCGTGGCCGTGTGCGCCGCGTGCCGCCGCGCCTTCCAGCACGTGCACGCCGCCGTGGAGCACGTAAAGAAGTCCTGCGAGTGCCTGGGTGCGTTCTCGTGCGACCTGAGCGAAGATGGCCCTGCAGCCGTGCTGTCGCCCACTAGTGGGCTGGTACGGTCCACGCAGGACGAAGAATCGGGGCTAACCCTGCGCATCGAACGCGAGGCAAactgcgcgggcgcggccgccaTGCTGGCGTCCGTACCGCCGTCACTGCGCGCCGTCGTCCGCGCCGTAAGGGTCGACAAGGCGTTCCGTTGCGAGTACTGCGAGGATGTATTTTACCTGGAAGAAGATTTGAACAAGCACCGAGCGATCCACAAGGGGATAAAGAATCCATTCACCTGTCATATCTGCAAAGTCAGCTTCGCTACGTATTCTAGATGCACGACCCACAAAACGACCCACGGGTTCTACAAGCGCCCCCTAGCGGACGTGAAGAACGCCCCCGGACGGGGGGACACCGGGCCCTCGGCGCGCGGGATACTCGGCTACGGCGGCTTCCCCGTCGTCAAGCACTTCCTGTGCGAggtacaaacagacagacagaagccCGGACAGGGGGACACCGGGCCCTCGGCGCGCGGGATACTCGGCTACGGCGGCATCCTCGTCGTCAAGCACTCCCTGTGCGaggtacagacagacagacagaaccCCGGACAGGGGGACACTGGGCCCTCGGCGCGCGGGATACTCGGCTACGGCGGCTTCCCCGTCGTCAAGCACTTCCTGTGCGAggtacaaacagacagacagaagccCGGACAGGGGGACACCGGGCCCTCGGCGCGCGGGATACTCGGCTACGGCGGCGTCCTCGTCGTCAAGCACTCCCTGTGCGaggtacagacagacagacagaaccCCGGACAGGGGGACACTGGGCCCTCGGCGCGCGGGATACTCGGCTACGGCGGCTTCCCCGTCGTCAAGCACTTCCTGTGCGAggtacaaacagacagacagaagccCGGACAGGGGGACACCGGGCCCTCGGCGCGCGGGATACTCGGCTACGGCGGCGTCCTCGTCGTCAAGCACTCCCTGTGCGaggtacagacagacagacagaaccCCGGACAGGGGGACACTGGGCCCTCGGCGCGCGGGATACTCGGCTACGGCGGCTTCCCCGTCGTCAAGCACTTCCTGTGCGAggtacaaacagacagacagaagccCGGACAGGGGGACACCGGGCCCTCGGCGCGCGGGATACTCGGCTACGGCGGCGTCCTCGTCGTCAAGCACTCCCTGTGCGaggtacagacagacagacagaaccCCGGACAGGGGGACACTGGGCCCTCGGCGCGCGGGATACTCGGCTACGGCGGCTTCCCCGTCGTCAAGCACTTCCTGTGCGAggtacaaacagacagacagaagccCGGACAGGGGGACACCGGGCCCTCGGCGCGCGGGATACTCGGCTACGGCGGCGTCCTCGTCGTCAAGCACTCCCTGTGCGaggtacagacagacagacagaaccCCGGACAGGGGGACACTGGGCCCTCGGCGCGCGGGATACTCGGCTACGGCGGCTTCCCCGTCGTCAAGCACTTCCTGTGCGAggtacaaacagacagacagaagccCGGACAGGGGGACACCGGGCCCTCGGCGCGCGGGATACTCGGCTACGGCGGCGTCCTCGTCGTCAAGCACTCCCTGTGCGaggtacagacagacagacagaaccCCGGACAGGGGGACACTGGGCCCTCGGCGCGCGGGATACTCGGCTACGGCGGCTTCCCCGTCGTCAAGCACTTCCTGTGCGAGgtacaaacagacaaacagaagCCCGGACAGGGGGACACCGGGCCCTCGGCGCGCGGGATACTCGGCTACGGCGGCGTCCTCGTCGTCAAGCACTCCCTGTGCGaggtacagacagacagacagaaccTCGGACAGGGGGACACTGGGCCCTCGGCGCGCGGGATACTCGGCTACGGCGGCTTCCCCGTCGTCAAGCACTTCCTGTGCGAggtacaaacagacagacagaagccCGGACAGGGGGACACCGGGCCCTCGGCGCGCGGGATACTCGGCTACGGCGGCTTCCCCGTCGTCAAGCACTTCCTGTGCGAggtacaaacagacagacagaagccCGGACAGGGGGACACCGGGCCCTCGGCGCGCGGGATACTCGGCTACGGCGGCGTCCTCGTCGTCAAGCACTCCCTGTGCGaggtacagacagacagacagaaccCCGGACAGGGGGACACTGGGCCCTCGGCGCGCGGGATACTCGGCTACGGCGGCTTCCCCGTCGTCAAGCACTTCCTGTGCGAggtacaaacagacagacagaagccCGGACAGGGGGACACCGGGCCCTCGGCGCGCGGGATACTCGGCTACGGCGGCGTCCTCGTCGTCAAGCACTCCCTGTGCGaggtacagacagacagacagaaccTCGGACAGGGGGACACTGGGCCCTCGGCGCGCGGGATACTCGGCTACGGCGGCTTCCCCGTCGTCAAGCACTTCCTGTGCGAggtacagacagacggacagaacgCCGGCCCCGGGCATTAA
Protein Sequence: MSWPPTGVHATDPDAECALLGYEVDLNSLTRNKPVALTDNIYQFLINAENNLLEYPMGSQMFDQMLEPNDTDGLVYVLDDGTQIKASQIHFDNEDPPFDFIAEKIPFVKYIDDDNDDIEPSSEVSTKMINITASPVSKWPSNASPKKPFINSVPFKLVNNTGFNAQFTKFLESNMDKTFTPLNTVTARNKSPRSLIRDNYKKYEDNIYNKNECITRDEVLNMFKDTPVVPYETQSFNDKRRHVRKSDPSRPTNHKTTSKPMPYIDDDGTLIGQNENQNCFICEKFVDNNMDKLYLFDNEDQKLHRSSPQKKLSTQLKIICEQCLDNNFKPSRLKSPSKSLNPDEYLVIRNNQQYIFQKTNSIDFKNIRGGFVNIGEATAIIDKIETEILKGNQVKQTDFVKVEVGSNGEIISKDDKKEANAETYCFIQGSSSDVEIIEGPEIDDAIDNLEEADEEVKEFLGMYQGDSNASSELKCRFCERVFADLPELMEHGDVHKHVTEDGEVYPCPLCFYGYANFKWLKGHLKAAHDKSNKPQAESNNDGAKDGKLIFPGYANFKWLKGHLEAAHFKSNKPQAESNNEGAKDGKLIFPGYANFKWLKGHLKAAHVTSNKPQAESNNNGAKDGKLIFPGYANFKWLKGHLKAAHDKSNKPQAESNNDGAKDGKLIFPGHANFKWLKGHLKAAHDKSNKPQAETNNDGAKDDATQSELSPVAKRTRSNNTKKEVQKDDSTKFEDDKPANVDTENGKQECTMEIKLEVKQEVLETSDEEAIWIVHTDDASADQLHSLLHSNEKSEEIVFKKPQKCAKCSQIMVDVSTHKCKKRGRKRKCLNKDENGTFSGSQKETVKRAPGRPRQYVDSGDNDLLVPRPRKKKTTELTSDPQIMTCHNCNESYTSKVRLKFHMQFHDSTEMLTTSGQYTCLECPGVTFAQETELFDHVHFQHNKQNHYQCSVKDCGKTFFLRASLTKHSRTHTDTRRYICGTCGKRFLDKQTLDEHGVTHLQIKPYQCHICLKQLTRRSRLRMHMRAHEEALCPALVAVCAACRRAFQHVHAAVEHVKKSCECLGAFSCDLSEDGPAAVLSPTSGLVRSTQDEESGLTLRIEREANCAGAAAMLASVPPSLRAVVRAVRVDKAFRCEYCEDVFYLEEDLNKHRAIHKGIKNPFTCHICKVSFATYSRCTTHKTTHGFYKRPLADVKNAPGRGDTGPSARGILGYGGFPVVKHFLCEVQTDRQKPGQGDTGPSARGILGYGGILVVKHSLCEVQTDRQNPGQGDTGPSARGILGYGGFPVVKHFLCEVQTDRQKPGQGDTGPSARGILGYGGVLVVKHSLCEVQTDRQNPGQGDTGPSARGILGYGGFPVVKHFLCEVQTDRQKPGQGDTGPSARGILGYGGVLVVKHSLCEVQTDRQNPGQGDTGPSARGILGYGGFPVVKHFLCEVQTDRQKPGQGDTGPSARGILGYGGVLVVKHSLCEVQTDRQNPGQGDTGPSARGILGYGGFPVVKHFLCEVQTDRQKPGQGDTGPSARGILGYGGVLVVKHSLCEVQTDRQNPGQGDTGPSARGILGYGGFPVVKHFLCEVQTDRQKPGQGDTGPSARGILGYGGVLVVKHSLCEVQTDRQNPGQGDTGPSARGILGYGGFPVVKHFLCEVQTDKQKPGQGDTGPSARGILGYGGVLVVKHSLCEVQTDRQNLGQGDTGPSARGILGYGGFPVVKHFLCEVQTDRQKPGQGDTGPSARGILGYGGFPVVKHFLCEVQTDRQKPGQGDTGPSARGILGYGGVLVVKHSLCEVQTDRQNPGQGDTGPSARGILGYGGFPVVKHFLCEVQTDRQKPGQGDTGPSARGILGYGGVLVVKHSLCEVQTDRQNLGQGDTGPSARGILGYGGFPVVKHFLCEVQTDGQNAGPGH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -