Basic Information

Insect: Epinotia brunnichana
Gene Symbol: -
Assembly: GCA_963854355.1
Location: OY977937.1:232162-261014[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 4.1 5.2e+02 3.4 0.3 2 23 6 27 5 27 0.96

2 14 8.6e-05 0.011 18.1 2.0 2 23 1759 1780 1758 1780 0.97

3 14 8.6e-05 0.011 18.1 2.0 2 23 1817 1838 1816 1838 0.97

4 14 8.6e-05 0.011 18.1 2.0 2 23 1875 1896 1874 1896 0.97

5 14 0.088 11 8.6 2.8 2 23 1900 1921 1899 1921 0.97

6 14 0.0063 0.8 12.2 3.7 1 23 1927 1949 1927 1950 0.96

7 14 0.91 1.2e+02 5.4 0.1 6 23 1964 1981 1963 1981 0.98

8 14 0.062 7.9 9.1 0.8 2 23 1987 2009 1986 2009 0.93

9 14 0.035 4.4 9.9 0.0 2 23 2025 2045 2024 2045 0.97

10 14 0.00067 0.086 15.3 1.2 1 20 2051 2070 2051 2073 0.91

11 14 0.0073 0.93 12.0 0.4 1 23 2081 2103 2081 2103 0.98

12 14 0.015 1.9 11.1 7.2 1 23 2109 2131 2109 2131 0.98

13 14 1.9e-05 0.0024 20.2 1.4 1 23 2137 2161 2137 2161 0.98

14 14 0.3 38 7.0 2.1 1 23 2167 2189 2167 2190 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	4.1	5.2e+02	3.4	0.3	2	23	6	27	5	27	0.96
2	14	8.6e-05	0.011	18.1	2.0	2	23	1759	1780	1758	1780	0.97
3	14	8.6e-05	0.011	18.1	2.0	2	23	1817	1838	1816	1838	0.97
4	14	8.6e-05	0.011	18.1	2.0	2	23	1875	1896	1874	1896	0.97
5	14	0.088	11	8.6	2.8	2	23	1900	1921	1899	1921	0.97
6	14	0.0063	0.8	12.2	3.7	1	23	1927	1949	1927	1950	0.96
7	14	0.91	1.2e+02	5.4	0.1	6	23	1964	1981	1963	1981	0.98
8	14	0.062	7.9	9.1	0.8	2	23	1987	2009	1986	2009	0.93
9	14	0.035	4.4	9.9	0.0	2	23	2025	2045	2024	2045	0.97
10	14	0.00067	0.086	15.3	1.2	1	20	2051	2070	2051	2073	0.91
11	14	0.0073	0.93	12.0	0.4	1	23	2081	2103	2081	2103	0.98
12	14	0.015	1.9	11.1	7.2	1	23	2109	2131	2109	2131	0.98
13	14	1.9e-05	0.0024	20.2	1.4	1	23	2137	2161	2137	2161	0.98
14	14	0.3	38	7.0	2.1	1	23	2167	2189	2167	2190	0.95

Sequence Information

Coding Sequence: ATGGAGCAGCTCGTGCAGTGCCCCGTGTGCACCCTCTTCCTCCACAATGGCATGTCCTTGGAGTCCCACCTCGACACCCACCCCAAAGACCAGGTCATCAAAGCGCTGTGCACCCTATCTGCTAACAATGTTGGCTTTGGAAGCCGGACTTCCACACCCCTGCACTCGGAGCGCTCCTACAGGAGCAGGTCAAGGACTCCAGCGGAGGACAGCCCCCGGTGGAGTGGGCGAAGCATTGACAATGAGAGATACTGGCGAAGAACCCCCAGCAGGTGCTCCAAGACTCCTGCCTCCAGTATCACTAGGAATGCAACACCTTCGGATGTGCGAATGGGTGACATCAACTTTGAGAATAATTCTAATAATGCTACATCTAGCCCCTACCCAGGTATGTCATTTATGAAGTCTGACAAGTCCAGTCAGCCCTTCATCCAGAATGTGCCCATTCCAGAGTTTGATCCGCAGTATGTTTACTACCCGGACCAGCAGGAGGACAAGGAGATCAAGTATTCACGCAGCGCTGAGTACAGTGCCATAGATAACACTAACAATGTGTTCACTCACAACATGCCATCGGCCCCGGCGATCAAGCTGCAAAGTGCCCTCGTGCCCACGAGTTCAGGTTCCCGCAGAAACACTGATCTTGTAAAAATACTTCCCAAACCCAATAATATAGTTGTAAAGGCTAGTATGGGAGGCGTGCAATATATAACTCCTGGAGTGAAGCCCATGCACCTGATGGTACCCACAGCACCCACATTTGTAcagaaaaatgttcaaaacaACATGATTGTGTCTGGCAGCATTCCCACCAGCCAGATCATGGAGCCCAAGTCTGTAGCGTCCCCAGTAGCCAGCAGCAGTAGTCAATTCAGCCAGTTATCAACTGGCACATTTACTCCAGGGACCACAGTGCTTACACAAAACTCTCAGATTATTTACAGGGAAATGGTGCACAATATTGATGGGAAACCTTTCCTCACCAGCATGCCCGCTGTGCTCAGTGGACACAACAATCTGACTAATGTGGCCGCCACTAGCTCCATGTACCAGAATGTCATGGTGGTGGACCAGTTTGGCAACACATCTTGTATGTACACCACTCCTCAGATCTTGGCTAAGCCATGTAGCATGCCAGTATTTAGTGAAGTATCTGTTAACAACCTGGAGAAAACTCTACCGAATTCTAGGAATGTAGGTAATGAGTCAAATAAAACATTGATTATTGAAGTGGGCCCTATAGTGGGCGCGCCAGTGGAAGTCAGTGCCTCCACCAGCACCTCACAATCGTCTCAGACAGTTTCTGAGGTTAAAAACACAGCAGGTCCCGAGAAACAGGTAGAAAGGAATGACACAGCCGGGTCTACAAGAGGATTAAAAATTCTTAGCAATATTAAGGTAGAAGTGCCAGTCCAGCATCACAAAAACTTGCTCAACACTGTGGTAGACCTCACCGGGCCGCAGCCTGAGTACTCGGAGAGGGCCGTCTCGCCAGAGAGAATCCTGCCTGACTTCGAGGACAACAACCATAGCCTGTTAGGAGACTGCATGCAGCCCTCTGCCACTAGTAATGATAGTATAGTTTCAAATACGTTCTCTGTGATAAAAAACGTCGGGAATCCCCCCTCGTACAAAGACTCAGTTTCCAAGTCCTGTGTTGTagataataaaattgaaaacgaattttccgaTAGTTGTCCCATGCCCGACCTCATTTGCAACGAGAAACCCTCCATATCGCCTTGCAGCGAGCTCTCCGAGAGTGGGGAGAACTCCACCGACAGAATTTCCATCTCGCCTAAGCCGGAGGCCGCGCCGGAGCCCCTGGAGTCACCCGCCGAAACAAAACTACCAAAGCCCTTCAGGAGCGCACCACTAAGACTGAACAATATCTTTGTCAAGAAGCATAAAAAGATTTTAGAGATTAAGAATTCCAAAAGTTTTTCCGTGACACCCTGCAGCAGTAAAGACCTGCAAGGACCTTCGTCGCCGCGGCCGCCCGAGAACTTCACCATGAACAAGATTCACAGCATCGACGTGGAGAATGAGAGGACCGAGACGCTGCATACGATCACGGTCGAGGTGTGCACCGACCACGACAGTCAGCACGAGTTCGATGCGGACACCGAGGAGCAGTCCATGGACTTGGAGCCGGTGGCGCACTGCAGCATCAGGGACTCGGTGCGCGTCAAGGAGGAGGTCAACTCCAGCAACGAGGGCGGCTTCAGCAACGAGCGCGCACTCGCGCCTCTCGAGGCCATGCGCCCGATCAACGTGATCGCGTACGGGGCCATGGCCGACTTCGACGACGAGTCCAATCAcaaggagctgctcgagctggAGGCCGCCTCCAAGAACAAACAGTTCGTGAGCATGATGAACGACAACTACTTCGGAGACAACATCTACGCGGACTACTTCACGCCGGAGCGCGAGCCCTTCGAGCGGGACCCCAAGGACGCGTACCTGTGGGGCGAGGGCCCCAGGGACACGGAGTTCGTGCTGCCCACCTTCATCCACGAGAGCTACAAGATCGCGGACAGCGGCGCGCCCGAGTTCGCGGAGCCCGGCCGCGACAAGGACGAGCGTCGCGGGGCCGCGCCGAGACCCGCCGACATGGAGTCGCCGTGGACCGGGATGTATCGCGAGGTGGCGGCGGAGGGCTACGACCTGGTGGCGCGCGAGAGCTGGGTCTCGGACGCGGAGGACGACCCGGCGGAGAAGACCGACTGCCTACAAGAGGCGGGGCGCGCGCCGCGGACGGTCACGTGCGGCGCGTGCCGGGCCGTGCTCGGCAGCCGCGCCGAGCTGCGTGCCCACCGCGCGCTCGTGCACGCGCCCGCCGGCAGCTCGCGCGCCGCCCgtcgcgcgcccgccgccgccatcAAGCAGGAGGACAAGCCCGAGCCTGCGCAGGGAGGTACGTGTCACTTGTTCGGCAGCCGCGCCGAGCTGCGTGCCCACCGCGCGCTCGTGCACGCGCCCGCCGGCAGCTCGCGCGCCGCCCgtcgcgcgcccgccgccgccatcAAGCAGGAGGACAAGCCCGAGCCTGCGCAGGGAGGTACGTGTCACTTGTTCGGCAGCCGCGCCGAGCTGCGTGCCCACCGCGCGCTCGTGCACGCGCCCGCCGGCAGCTCGCGCGCCGCCCgtcgcgcgcccgccgccgccatcAAGCAGGAGGACAAGCCCGAGCCTGCGCAGGGAGGTACGTGTCACTTGTTCGGCAGCCGCGCCGAGCTGCGTGCCCACCGCGCGCTCGTGCACGCGCCCGCCGGCAGCTCGCGCGCCGCCCgtcgcgcgcccgccgccgccatcAAGCAGGAGGACAAGCCCGAGCCTGCGCAGGGAGGTACGTGTCACTTGTTCGGCAGCCGCGCCGAGCTGCGTGCCCACCGCGCGCTCGTGCACGCGCCCGCCGGCAGCTCGCGCGCCGCCCgtcgcgcgcccgccgccgccatcAAGCAGGAGGACAAGCCCGAGCCTGCGCAGGGAGGTACGTGTCACTTGTTCGGCAGCCGCGCCGAGCTGCGTGCCCACCGCGCGCTCGTGCACGCGCCCGCCGGCAGCTCGCGCGCCGCCCgtcgcgcgcccgccgccgccatcAAGCAGGAGGACAAGCCCGAGCCTGCGCAGGGAGGTACGTGTCACTTGTTCGGCAGCCGCGCCGAGCTGCGTGCCCACCGCGCGCTCGTGCACGCGCCCGCCGGCAGCTCGCGCGCCGCCCgtcgcgcgcccgccgccgccatcAAGCAGGAGGACAAGCCCGAGCCTGCGCAGGGAGGTACGTGTCACTTGTTCGGCAGCCGCGCCGAGCTGCGTGCCCACCGCGCGCTCGTGCACGCGCCCGCCGGCAGCTCGCGCGCCGCCCgtcgcgcgcccgccgccgccatcAAGCAGGAGGACAAGCCCGAGCCTGCGCAGGGAGGTACGTGTCACTTGTTCGGCAGCCGCGCCGAGCTGCGTGCCCACCGCGCGCTCGTGCACGCGCCCGCCGGCAGCTCGCGCGCCGCCCgtcgcgcgcccgccgccgccatcAAGCAGGAGGACAAGCCCGAGCCTGCGCAGGGAGGTACGTGTCACTTGTTCGGCAGCCGCGCCGAGCTGCGTGCCCACCGCGCGCTCGTGCACGCGCCCGCCGGCAGCTCGCGCGCCGCCCgtcgcgcgcccgccgccgccatcAAGCAGGAGGACAAGCCCGAGCCTGCGCAGGGAGGTACGTGTCACTTGTTCGGCAGCCGCGCCGAGCTGCGTGCCCACCGCGCGCTCGTGCACGCGCCCGCCGGCAGCTCGCGCGCCGCCCgtcgcgcgcccgccgccgccatcAAGCAGGAGGACAAGCCCGAGCCTGCGCAGGGAGGTACGTGTCACTTGTTCGGCAGCCGCGCCGAGCTGCGTGCCCACCGCGCGCTCGTGCACGCGCCCGCCGGCAGCTCGCGCGCCGCCCgtcgcgcgcccgccgccgccatcAAGCAGGAGGACAAGCCCGAGCCTGCGCAGGGAGGTACGTGTCACTTGTTCGGCAGCCGCGCCGAGCTGCGTGCCCACCGCGCGCTCGTGCACGCGCCCGCCGGCAGCTCGCGCGCCGCCCgtcgcgcgcccgccgccgccatcAAGCAGGAGGACAAGCCCGAGCCTGCGCAGGGAGGTACGTGTCACTTGTTCGGCAGCCGCGCCGAGCTGCGTGCCCACCGCGCGCTCGTGCACGCGCCCGCCGGCAGCTCGCGCGCCGCCCgtcgcgcgcccgccgccgccatcAAGCAGGAGGACAAGCCCGAGCCTGCGCAGGGAGGTACGTGTCACTTGTTCGGCAGCCGCGCCGAGCTGCGTGCCCACCGCGCGCTCGTGCACGCGCCCGCCGGCAGCTCGCGCGCCGCCCgtcgcgcgcccgccgccgccatcAAGCAGGAGGACAAGCCCGAGCCTGCGCAGGGAGGTACGTGTCACTTGTTCGGCAGCCGCGCCGAGCTGCGTGCCCACCGCGCGCTCGTGCACGCGCCCGCCGGCAGCTCGCGCGCCGCCCgtcgcgcgcccgccgccgccatcAAGCAGGAGGACAAGCCCGAGCCTGCGCAGGGAGAATCGGACGCGCTACTACTGCCGGACTCCAAGGAAGCGCTGGTGTCCAGCATCCTGTACCCCGGGCTCGAGACCAAGCCCGTCATCGTGAAGCAGgagccgcgccggcgccgccgcgaCCACACCTGCCCCACCTGcaagGTGGACCAGGGGTCGGAGGCGGCGTTCACGGCGCACCTCAAGCTGCACCCGCTAGAGTGCCTCACGTGCGGCAAGTGCTTCTTCCGGCGCGCCAACCTCGCGCTGCACCTCAAGACGCACCAGGGCATCAAGAACTTCAAGTCAGTACATTACTATAGGTTGGCAGGTTGGCAGGTGGACCAGGGGTCGGAGGCGGTGTTCACGGCGCACCTCAAGCTGCACCCGCTAGAGTGCCTCACGTGCGGCAAGTGCTTCTTCCGGCGCGCCAACCTCGCGCTGCACCTCAAGACGCACCAGGGCATCAAGAACTTCAAGTCAGTACATTACTATAGGTTGGCAGGTTGGCAGGTGGACCAGGGGTCGAAGGCGGCGTTCACGGCGCACCTCAAGCTGCACCCGCTAGAGTGCCTCACGTGCGGCAAGTGCTTCTTCCGGCGCGCCAACCTCGCGCTGCACCTCAAGACGCACCAGGGCATCAAATGCGAGGTGTGTGAGAAGCGGTTCCTGACGCGGCAGAAGCTGATGGAGCACCACAACACGCACACGGGCCGCGCGCCCTACAAGTGCACCGTCTGCGACGACACCTTCCGCAGATACTCCAACATGGTGCAGCACAGGGACCGGCACCACCTGCACAAGAAGCGCGTGGTGCGCGACTTCGTGTGCGCGTGCGGCGCAGTGTTCCACTCGCGCGCCAAGCTGCGCTGGCACGCGGAGACGCACGCGGCGCGCCCGCACGCGTGCCTGGCGTGCGGGGACAAGTTCGTGCACGCGGCCAGCCTCACGCGCCACGTGCGGCGCGCGCACGACCCCGCCTACACCGACACCAGGCGGCCCAGGCAGCAGAACGTGCCCTGTCCCGTCTGCAAGCAGGTGTACCTGCGAGCCAACCTGCGCGCGCACCTGCTGACGCACAGCGGCAAGCGGCCGCACGTGTGCGTGGTGTGCAACAAGGCCTTCACCACCAAGTGGAACCTCAAGCTGCATCGCTGGACGCACGCCTCGCGCTCCGCCAAGCCCTACAAGTGCGCGCTGTGCAAGGGCGCCTTCATCCGCCACTCGGAGTACGTGGCACACATGAACGCACACAAGGCCGTGCGCCCCTACACGTGCAACTACTGCGGCTGCCAGTTCATCCGCAAGTACAACTGCCAGCGCCACGTGCGCGAGCACGAGACCGCCAAGAAGTACGTGTGCAAGGTGGCCGAGTGCGGCAAGTCCTTCCACCGCTCCTACTACCTGTCCGAGCACATGAAGGTGCACAGTGGCGCCCGACCCTTCGCGTGCGGCGTCTGCGGCAAGCTCTCCGGCAACAAGTCCAACCACAACAAGCACGTGCGCATCCACCACGCGCGCGAGCCCGTGGCCAGCGAGGCCTAG
Protein Sequence: MEQLVQCPVCTLFLHNGMSLESHLDTHPKDQVIKALCTLSANNVGFGSRTSTPLHSERSYRSRSRTPAEDSPRWSGRSIDNERYWRRTPSRCSKTPASSITRNATPSDVRMGDINFENNSNNATSSPYPGMSFMKSDKSSQPFIQNVPIPEFDPQYVYYPDQQEDKEIKYSRSAEYSAIDNTNNVFTHNMPSAPAIKLQSALVPTSSGSRRNTDLVKILPKPNNIVVKASMGGVQYITPGVKPMHLMVPTAPTFVQKNVQNNMIVSGSIPTSQIMEPKSVASPVASSSSQFSQLSTGTFTPGTTVLTQNSQIIYREMVHNIDGKPFLTSMPAVLSGHNNLTNVAATSSMYQNVMVVDQFGNTSCMYTTPQILAKPCSMPVFSEVSVNNLEKTLPNSRNVGNESNKTLIIEVGPIVGAPVEVSASTSTSQSSQTVSEVKNTAGPEKQVERNDTAGSTRGLKILSNIKVEVPVQHHKNLLNTVVDLTGPQPEYSERAVSPERILPDFEDNNHSLLGDCMQPSATSNDSIVSNTFSVIKNVGNPPSYKDSVSKSCVVDNKIENEFSDSCPMPDLICNEKPSISPCSELSESGENSTDRISISPKPEAAPEPLESPAETKLPKPFRSAPLRLNNIFVKKHKKILEIKNSKSFSVTPCSSKDLQGPSSPRPPENFTMNKIHSIDVENERTETLHTITVEVCTDHDSQHEFDADTEEQSMDLEPVAHCSIRDSVRVKEEVNSSNEGGFSNERALAPLEAMRPINVIAYGAMADFDDESNHKELLELEAASKNKQFVSMMNDNYFGDNIYADYFTPEREPFERDPKDAYLWGEGPRDTEFVLPTFIHESYKIADSGAPEFAEPGRDKDERRGAAPRPADMESPWTGMYREVAAEGYDLVARESWVSDAEDDPAEKTDCLQEAGRAPRTVTCGACRAVLGSRAELRAHRALVHAPAGSSRAARRAPAAAIKQEDKPEPAQGGTCHLFGSRAELRAHRALVHAPAGSSRAARRAPAAAIKQEDKPEPAQGGTCHLFGSRAELRAHRALVHAPAGSSRAARRAPAAAIKQEDKPEPAQGGTCHLFGSRAELRAHRALVHAPAGSSRAARRAPAAAIKQEDKPEPAQGGTCHLFGSRAELRAHRALVHAPAGSSRAARRAPAAAIKQEDKPEPAQGGTCHLFGSRAELRAHRALVHAPAGSSRAARRAPAAAIKQEDKPEPAQGGTCHLFGSRAELRAHRALVHAPAGSSRAARRAPAAAIKQEDKPEPAQGGTCHLFGSRAELRAHRALVHAPAGSSRAARRAPAAAIKQEDKPEPAQGGTCHLFGSRAELRAHRALVHAPAGSSRAARRAPAAAIKQEDKPEPAQGGTCHLFGSRAELRAHRALVHAPAGSSRAARRAPAAAIKQEDKPEPAQGGTCHLFGSRAELRAHRALVHAPAGSSRAARRAPAAAIKQEDKPEPAQGGTCHLFGSRAELRAHRALVHAPAGSSRAARRAPAAAIKQEDKPEPAQGGTCHLFGSRAELRAHRALVHAPAGSSRAARRAPAAAIKQEDKPEPAQGGTCHLFGSRAELRAHRALVHAPAGSSRAARRAPAAAIKQEDKPEPAQGGTCHLFGSRAELRAHRALVHAPAGSSRAARRAPAAAIKQEDKPEPAQGGTCHLFGSRAELRAHRALVHAPAGSSRAARRAPAAAIKQEDKPEPAQGESDALLLPDSKEALVSSILYPGLETKPVIVKQEPRRRRRDHTCPTCKVDQGSEAAFTAHLKLHPLECLTCGKCFFRRANLALHLKTHQGIKNFKSVHYYRLAGWQVDQGSEAVFTAHLKLHPLECLTCGKCFFRRANLALHLKTHQGIKNFKSVHYYRLAGWQVDQGSKAAFTAHLKLHPLECLTCGKCFFRRANLALHLKTHQGIKCEVCEKRFLTRQKLMEHHNTHTGRAPYKCTVCDDTFRRYSNMVQHRDRHHLHKKRVVRDFVCACGAVFHSRAKLRWHAETHAARPHACLACGDKFVHAASLTRHVRRAHDPAYTDTRRPRQQNVPCPVCKQVYLRANLRAHLLTHSGKRPHVCVVCNKAFTTKWNLKLHRWTHASRSAKPYKCALCKGAFIRHSEYVAHMNAHKAVRPYTCNYCGCQFIRKYNCQRHVREHETAKKYVCKVAECGKSFHRSYYLSEHMKVHSGARPFACGVCGKLSGNKSNHNKHVRIHHAREPVASEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -