Basic Information

Insect: Epinotia brunnichana
Gene Symbol: -
Assembly: GCA_963854355.1
Location: OY977935.1:7793876-7854231[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.011 1.4 11.5 6.2 1 23 175 197 175 197 0.99

2 15 3.9e-05 0.0049 19.2 0.7 1 23 203 225 203 225 0.99

3 15 3.2 4.1e+02 3.7 4.0 1 23 231 261 231 261 0.86

4 15 4.6 5.8e+02 3.2 0.1 9 23 293 307 292 307 0.92

5 15 4.6 5.8e+02 3.2 0.1 9 23 339 353 338 353 0.92

6 15 4.6 5.8e+02 3.2 0.1 9 23 385 399 384 399 0.92

7 15 0.0042 0.54 12.8 1.1 1 23 405 428 405 428 0.96

8 15 0.1 13 8.5 3.3 1 21 434 454 434 456 0.95

9 15 0.00011 0.015 17.7 0.8 1 23 462 484 462 484 0.99

10 15 0.00026 0.033 16.6 3.3 1 23 490 512 490 512 0.98

11 15 0.0022 0.27 13.7 1.1 1 23 1001 1024 1001 1024 0.98

12 15 0.038 4.8 9.8 4.9 2 23 1031 1052 1030 1052 0.96

13 15 0.0033 0.42 13.1 2.1 1 23 1058 1080 1058 1080 0.98

14 15 5.2e-06 0.00067 21.9 1.9 1 23 1086 1109 1086 1109 0.96

15 15 2.8e-05 0.0036 19.6 1.9 1 23 1123 1145 1123 1145 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.011	1.4	11.5	6.2	1	23	175	197	175	197	0.99
2	15	3.9e-05	0.0049	19.2	0.7	1	23	203	225	203	225	0.99
3	15	3.2	4.1e+02	3.7	4.0	1	23	231	261	231	261	0.86
4	15	4.6	5.8e+02	3.2	0.1	9	23	293	307	292	307	0.92
5	15	4.6	5.8e+02	3.2	0.1	9	23	339	353	338	353	0.92
6	15	4.6	5.8e+02	3.2	0.1	9	23	385	399	384	399	0.92
7	15	0.0042	0.54	12.8	1.1	1	23	405	428	405	428	0.96
8	15	0.1	13	8.5	3.3	1	21	434	454	434	456	0.95
9	15	0.00011	0.015	17.7	0.8	1	23	462	484	462	484	0.99
10	15	0.00026	0.033	16.6	3.3	1	23	490	512	490	512	0.98
11	15	0.0022	0.27	13.7	1.1	1	23	1001	1024	1001	1024	0.98
12	15	0.038	4.8	9.8	4.9	2	23	1031	1052	1030	1052	0.96
13	15	0.0033	0.42	13.1	2.1	1	23	1058	1080	1058	1080	0.98
14	15	5.2e-06	0.00067	21.9	1.9	1	23	1086	1109	1086	1109	0.96
15	15	2.8e-05	0.0036	19.6	1.9	1	23	1123	1145	1123	1145	0.95

Sequence Information

Coding Sequence: ATGCCGCCGCCTGACAAGAAGACCATTGCAGACGGGAAACTGATCCAATCCTACCTGAACACCTACAGCGCGCAAAGCGAACCGCCCACTGTGTTAGACTTGAATGGTAGTGACGCAGACGAGGTGGCCACCAGCAATGGCGTCACTTACTTCGTGGACGAGCAGGGCCGGTACTACTACCAGCCCGGCGAGAACCAGTCCATCATGTCGCTGCCCACGCCGGACGACCACGACGAGGGTATCGCCGAGGACGAAAACAACCTGATGGAGGAAGGGTACCAGACTGTGACCCTGGTGCCTTCGGAGTCTGGCTCCGGAGAGGTCAGCTATGTGCTGGTGGTGCAGGAGGAAACCAAGCCAGTCCTCAATGTTGACATCAAGATTGATCAGGAAGAGGAAGAGGACAAAGGCAACGACGACGTGTACAACTTCGAGGAGGAGGGTGTCGAGGAGGTCTCCGAGGAGGAGGAGGGGGGTGCCAAGAGGAAAAAGACGCCCAAGCGGCGCAACCAGCGGTCCAAGTTCACTTGCACCTTCTGCAGCTACACCAGCCATAGGCGATACCTCCTTCTAAGACACATGAAAACCCACTCTGAAGACCGGCCCTACAAGTGCAAGGTGTGCGAACGAGGCTTCAAAACCATGGCGTCGCTGCAGAACCATGTGAACATGCACAACGGAGTCAAGCCTCACGTCTGCAAGTACTGCAACAGTCCCTTCACCACCTCAGGTGTGTGGGGCTTCAAGACCATGGCGTCGCTGCAGAACCATGTGAATATGCACAACGGAGTCAAGCTTCACGTGTGCAAGTACTGCAACAGTCCCTTCACAATCTCAGGTCAGGGTAACCATAGGACAGTGTTGCAAGGTGTGTGGGGCTTCAAGACCATGGCGTCGCTGCAGAACCATGTGAATATGCACAACGGAGTCAAGCTTCACGTGTGCAAGTACTGCAACAGTCCCTTCACAATCTCAGGTCAGGGTAACCATAGGACAGTGTTGCAAGGTGTGTGGGGCTTCAAGACCATGGCGTCGCTGCAGAACCATGTGAATATGCACAACGGAGTCAAGCTTCACGTGTGCAAGTACTGCAACAGTCCCTTCACAATCTCAGGTCAGGGTAACCATAGGACAGTGTTGCAAGGTGTGTGGGGCTTCAAGACCATGGCGTCGCTGCAGAACCATGTGAATATGCACAACGGAGTCAAGCTTCACGTGTGCAAGTACTGCAACAGTCCCTTCACAATCTCAGGCGAGTTAGTGCGGCACGTCCGCTACCGGCACACGCACGAGAAGCCGCACAAGTGCACCGAGTGCGACTACGCGTCCGTCGAGCTCTCCAAACTGCGGCGGCACGTCCGCTGCCATACCGGGGAGAGGCCTTACCAGTGCCCGGACTGCACGTACGCCTCTCCGGACACGTTCAAGCTGAAGCGGCACCTGCGCACGCACACTGGCGAGAAACCCTACAAGTGCGACAGCTGCAACATGTGCTTCACGCAGTCCAACTCGCTCAAGGCGCACAAGCTCATACACAACGGGCACGTTGATTTGCTAGAGTCCAAGAGTAGAGAAGTTAGATCCGAAATACAAGAAACTAAACAAACCCTAGAAGCAACTGAAAGTCTGCTCAATAACATTCAACAAACTTCGACTTACAACACACCATACGTACAACCTGAGAAATCTCAACTACCTCCAGTATTGTACTCTAAGGCTTTGGGAGGCAAAAATAAAGCTTCGCTATCTGCAACACCCGGCATGTATACAACCAAAGGAAAGTCTAGGTCGTCGCTGGAGGTCAAGAAACAGAAAGGTCAAGGACACACTACAACACCGTCCACCATTAACATCCCTAGTACCTCATCGAGTCCGTTAGACACAGTGGAAGTTGCCCCTCTAGATAACGAGACTTGGACTGATCCGAAATCTAAGCGCACGCGTCTTTCATCAGCCAGCACAGTGAGAGGTTCAGCAGCTCCAGGTACCACCTTTTTGCAGGCTTCTGAAAAaatgacatacctacatctCTTCTATGTCAAACAGGGAACGACTGATGATCAATTCTGCCAAATACACCAATACAACAGCATTCACAACCATCAAGATGGGTTACTAGACTTGGTTCTTAGCGATCTGAGCGAGCAGCGAGTGCGTGTGTCGCGCGCTGCCACCGCGCTGGTACCGCCCGACGGTTACCACCCGCCGCTCGAGGTGACGCTGTCACTGCCGCGTGCGCGAGTCGATACCGTACATTTCCACGCACAGCCTTCTAATAATATATCTCGATCACTACGAGTACAATGGAACTTTCGTAAGGCGGACTTTAGTGCACTTTATGCTAATATGGCTGAAATTGACTGGGGATCCGTGTTAAGTTCTAGATGTGTCAACGATGCGACGGAGGCATTATATCTTAAGTTAAATGAATGTATATCTAAGCATGTCCCGAGTAAAAGCAGCCGACCACCTGTTATAGGAAAATACGTCTACCCGACTTGGTACACTCCCGAAATTGTACACACTCTACAAACTAaatatttccattttaaaaAGCATAAGGAAACAGGTTCCGAATTTAATAGAGAAATGTTTAAATACTATAGAGGCCATGCTAAGTTTTTAATCGATATCGAGTATAAAAGGTACAAGGAAAACATTGAACGTGACATAACCGACGATCCGACAACGTTCTGGAAATACGTAAAAAGCAAACGCAAAGACTTGAAACGACACGACGACTACACTTACTTGGATAGAACAGTTACGGGACAAGATGCCGCGAATGCTTTTGCAGATTATTTTAGCTCTGTGTTCCATAGTGAGGTACCCCATCTAGACGCTGAAGAAGCAGCACGGAACAGCGCAGCGAGGAGTGGAGGCGTGCCTGACTCGGCACGGGTCGCCGTGGACGCCGTCAGCGTCACAGATCTGCGGCGTGCCGCCAAGCGACTCAAGCCGCGCTCTTCGGCTGGACCGGATGTGGCAGACAAGCCCGTGTACCGCTGCGAGCTCTGCCCGGCCAAGTGCGGCCGCAAGACGGACCTGCGCATACACATACAGAAGCTGCACACCTCGGACACGCCGCTCAAGTGCAAGCGGTGCGGGAAGTCCTTCCCCGACCGCTACTCCTGCAAGCTGCACAACaagACCCACGAGGGCGAGAAATGCTTCAAGTGCGACCTGTGCCCTTACGCGTCGACGATGCTGCGCCACCTCAAGTCGCACATGCTCAAGCACACCGACGAGAAGCCGTTCGTGTGCACCGAGTGCGACCAGAGCTTCCGTCAGAAACAGCTGTTGCGGCGGCATCAGAACCTGTACCACAATCCGGACTACGTGCCCAAGCCGCCCAAGGAGAAGACGCACGCCTGCCAAGAGTGCAAACGCACCTTCGCACATAAGGGCAACCTGATCAGACACTTGGCCATCCACGACCCGGAGTCGGGGCACACCGAGCGCGCCCTCGCCCTCAAGATCGGCCGGCAGCGCAAGATCAAGTACTTGGAGCCCCGCACAGAGGTAACCTGA
Protein Sequence: MPPPDKKTIADGKLIQSYLNTYSAQSEPPTVLDLNGSDADEVATSNGVTYFVDEQGRYYYQPGENQSIMSLPTPDDHDEGIAEDENNLMEEGYQTVTLVPSESGSGEVSYVLVVQEETKPVLNVDIKIDQEEEEDKGNDDVYNFEEEGVEEVSEEEEGGAKRKKTPKRRNQRSKFTCTFCSYTSHRRYLLLRHMKTHSEDRPYKCKVCERGFKTMASLQNHVNMHNGVKPHVCKYCNSPFTTSGVWGFKTMASLQNHVNMHNGVKLHVCKYCNSPFTISGQGNHRTVLQGVWGFKTMASLQNHVNMHNGVKLHVCKYCNSPFTISGQGNHRTVLQGVWGFKTMASLQNHVNMHNGVKLHVCKYCNSPFTISGQGNHRTVLQGVWGFKTMASLQNHVNMHNGVKLHVCKYCNSPFTISGELVRHVRYRHTHEKPHKCTECDYASVELSKLRRHVRCHTGERPYQCPDCTYASPDTFKLKRHLRTHTGEKPYKCDSCNMCFTQSNSLKAHKLIHNGHVDLLESKSREVRSEIQETKQTLEATESLLNNIQQTSTYNTPYVQPEKSQLPPVLYSKALGGKNKASLSATPGMYTTKGKSRSSLEVKKQKGQGHTTTPSTINIPSTSSSPLDTVEVAPLDNETWTDPKSKRTRLSSASTVRGSAAPGTTFLQASEKMTYLHLFYVKQGTTDDQFCQIHQYNSIHNHQDGLLDLVLSDLSEQRVRVSRAATALVPPDGYHPPLEVTLSLPRARVDTVHFHAQPSNNISRSLRVQWNFRKADFSALYANMAEIDWGSVLSSRCVNDATEALYLKLNECISKHVPSKSSRPPVIGKYVYPTWYTPEIVHTLQTKYFHFKKHKETGSEFNREMFKYYRGHAKFLIDIEYKRYKENIERDITDDPTTFWKYVKSKRKDLKRHDDYTYLDRTVTGQDAANAFADYFSSVFHSEVPHLDAEEAARNSAARSGGVPDSARVAVDAVSVTDLRRAAKRLKPRSSAGPDVADKPVYRCELCPAKCGRKTDLRIHIQKLHTSDTPLKCKRCGKSFPDRYSCKLHNKTHEGEKCFKCDLCPYASTMLRHLKSHMLKHTDEKPFVCTECDQSFRQKQLLRRHQNLYHNPDYVPKPPKEKTHACQECKRTFAHKGNLIRHLAIHDPESGHTERALALKIGRQRKIKYLEPRTEVT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -