Basic Information

Insect: Epinotia brunnichana
Gene Symbol: -
Assembly: GCA_963854355.1
Location: OY977958.1:20082816-20101081[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0015 0.19 14.2 0.0 1 23 388 410 388 410 0.98

2 10 4.8e-05 0.0061 18.9 1.3 1 23 472 494 472 494 0.99

3 10 7.8e-07 0.0001 24.5 1.8 1 23 515 537 515 537 0.98

4 10 0.00073 0.093 15.2 0.8 1 23 543 565 543 565 0.98

5 10 7.3e-06 0.00092 21.5 3.0 1 23 571 593 571 593 0.98

6 10 1.2e-05 0.0015 20.9 3.2 1 23 599 621 599 621 0.98

7 10 0.00027 0.035 16.5 1.6 1 23 627 649 627 649 0.98

8 10 1.6e-06 0.0002 23.6 2.1 1 23 655 677 655 677 0.99

9 10 2.7e-05 0.0034 19.7 4.0 1 23 683 705 683 705 0.96

10 10 0.00012 0.015 17.7 0.5 1 19 711 729 711 730 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0015	0.19	14.2	0.0	1	23	388	410	388	410	0.98
2	10	4.8e-05	0.0061	18.9	1.3	1	23	472	494	472	494	0.99
3	10	7.8e-07	0.0001	24.5	1.8	1	23	515	537	515	537	0.98
4	10	0.00073	0.093	15.2	0.8	1	23	543	565	543	565	0.98
5	10	7.3e-06	0.00092	21.5	3.0	1	23	571	593	571	593	0.98
6	10	1.2e-05	0.0015	20.9	3.2	1	23	599	621	599	621	0.98
7	10	0.00027	0.035	16.5	1.6	1	23	627	649	627	649	0.98
8	10	1.6e-06	0.0002	23.6	2.1	1	23	655	677	655	677	0.99
9	10	2.7e-05	0.0034	19.7	4.0	1	23	683	705	683	705	0.96
10	10	0.00012	0.015	17.7	0.5	1	19	711	729	711	730	0.96

Sequence Information

Coding Sequence: atgtactatatctGCTACTTCGCCACGGTGCACTCACTGCTGCAGTATGGCGCCGAGCTCTGGGGTCGCTGTGCTGCGGAGTGGGAGCGGGCGTTCCGCCTCCAGAAACGTGCAGTCAGAATTATTGCTCGAGTTCCCCACAATACTCACGCGAAGCCTCTTTTTACCAGGCTAGGCATACTAACACTGCCGGCTGTAGTCATTTTGCAAGTGGCAGTACGAGTATATATGAGAGTGAACCTGGCGTCATTTAAAACATTTGTTCACATCAAAGAGGAGGCAGAATACACGGAGGAGGTAGAGACGTATGAGGACTTTACAAATGATCACGACTATTCTAAGGAGCCCTCCTTGGAAAGTGCAGCGAACGAGGTCTCGCAGTCGCAGGATGGCCATGACGTGAAGGACGAGCTCGAGGTGGGCCCGGTGCGGTTGCTGCGGTCGGGCGTAGCTTATTCCGTTACTGAACACGTCCAAGTGCCAGTCGCGACCGGGTGCGAGCAGGAGCCCGCGCCAGAAAGAGACCGCGAACAAACGAATGACTCCATCCACGAGGTTCCCAGCAACATACCATCAGCGACTACCCTGGAAACTAGTGAAGAGATTCCCACAAATAATGAAAACGAGGAGGAACACCAAAAAGAAGACGACAGCAACACAGTTCCCGATGTAGAAATACAAAGTAATATTATTGATGTCATGTCGCTTCACGATGTAGAAAAAGGAGATAGTAATACAGTAAGTGACATTGATAAAGAAAAGGATAGCGCCACGGTTCCAGATGTAGAAAAAGAAGAAAGCAACACAGTTAGTGATATTGACAAAAAAGATGATAGTAATGAAGTGAATGACATTGAACATGAAGAAGATAGCAACACAGTTAACGATGTTGAAAAAGAAGAAGACACCAATACTGATAACAATATGGAATACGATGAAATTCGCACAGAAGTAAATGATATAGAAAAAGAAGAAGATGTCAGTATAGCAAATGATGTTGAGAAAAAAGAAGATAGCAATAATATACTACATATAGAAAAAGAAGAAGATACCAATTTCGATAACGATATACAAAATAGCAACACTGCACCCAACAATACAGAAGATAGCAACAGAGTGAACAATATGGAAACAGAAAACAGCACTAGTGAAAAAAAACCCTACGTATGCGATATGTGCAACGAACCGTTTGAGCTGAAGCCGGATTTGCTGGAACACATCATGATACACATCTACATGCCTATGGACGAGCCGGAGGAGGAAACAAATGCTGTCGTGGATAACGTTCCAGAAGAGCCTGTCTCGATGCAAGACCGATTCGCGCTCCGGGACTGCTGGGTGAGGCTCGAACGCTGTCCCGTCCCACCTCAGCCCACCACCGAAGCCCTACAAGACATCGCCAACTCCAACGCATATGAGTGCGACATTTGTGGAAACACATATATACTCAAGCGACATCTTATAAGACATATTAAGAGACACAGAAAAAAGAAGATTAGGTACAGTTTACCGAAGAAGCGGAATAACAATATTGAAAAGCCGTTCACCTGCGAAATATGCAAGAAGAGTTTCACACGTTTATATACATTGCAAGTGCACACTCGGATACACACGGGAACAAAGCCGTATGCCTGCAAAATATGCCATAAGCAGTTTGGCGTGTTAGGGAACTATGAGATCCATAAACGAGTTCACACTGGAGAAAGGCCATACTCGTGCAACATATGTAAAAAAGATTTCTCGCAAATTGGTCATCTGAGGTCGCACCAGCGGTCGCACACTGGAGAGAAACCATATGCCTGTAAGCTGTGTAAAAAAGAATTCACGCGATCGAGTCAAATAAAGCATCATATACGAGTGCACACTGGTGAGAAGCCTTATGCCTGCAAAATATGCCAAAGGCATTTTTCGGAACTAGGCACGTTGAAAACACACGAGCGAATTCACACTGGTGACCGTCCATATTCCTGCGATATATGTAAAAAGGAATTCACACAATCCAGCTCTATGAAGGTACATAGACGAACTCACACTGGAGAGAGGCCGCATTGTTGTGATTTATGTCCAAAGCGGTTCTCAGATTTGAGCACTTTAAAGGCGCACAGACGAATACACACTGGAGAGAAACCACACTCCTGCAAGATATGTAAAAAGGCATTCACGCAGTTGGCTAATTTGAgggtacatgaatggcgtagGTCCTGTGCACCTCCCCCATAA
Protein Sequence: MYYICYFATVHSLLQYGAELWGRCAAEWERAFRLQKRAVRIIARVPHNTHAKPLFTRLGILTLPAVVILQVAVRVYMRVNLASFKTFVHIKEEAEYTEEVETYEDFTNDHDYSKEPSLESAANEVSQSQDGHDVKDELEVGPVRLLRSGVAYSVTEHVQVPVATGCEQEPAPERDREQTNDSIHEVPSNIPSATTLETSEEIPTNNENEEEHQKEDDSNTVPDVEIQSNIIDVMSLHDVEKGDSNTVSDIDKEKDSATVPDVEKEESNTVSDIDKKDDSNEVNDIEHEEDSNTVNDVEKEEDTNTDNNMEYDEIRTEVNDIEKEEDVSIANDVEKKEDSNNILHIEKEEDTNFDNDIQNSNTAPNNTEDSNRVNNMETENSTSEKKPYVCDMCNEPFELKPDLLEHIMIHIYMPMDEPEEETNAVVDNVPEEPVSMQDRFALRDCWVRLERCPVPPQPTTEALQDIANSNAYECDICGNTYILKRHLIRHIKRHRKKKIRYSLPKKRNNNIEKPFTCEICKKSFTRLYTLQVHTRIHTGTKPYACKICHKQFGVLGNYEIHKRVHTGERPYSCNICKKDFSQIGHLRSHQRSHTGEKPYACKLCKKEFTRSSQIKHHIRVHTGEKPYACKICQRHFSELGTLKTHERIHTGDRPYSCDICKKEFTQSSSMKVHRRTHTGERPHCCDLCPKRFSDLSTLKAHRRIHTGEKPHSCKICKKAFTQLANLRVHEWRRSCAPPP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -