Ebru037177.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Epinotia brunnichana
Gene Symbol
-
Assembly
GCA_963854355.1
Location
OY977946.1:13916373-13923321[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 0.00049 0.063 15.7 0.5 1 23 53 75 53 75 0.98
2 25 0.00085 0.11 15.0 0.1 3 23 152 173 150 173 0.92
3 25 0.03 3.9 10.1 0.1 1 23 188 210 188 210 0.96
4 25 0.03 3.9 10.1 0.1 1 23 249 271 249 271 0.96
5 25 0.03 3.9 10.1 0.1 1 23 310 332 310 332 0.96
6 25 0.03 3.9 10.1 0.1 1 23 371 393 371 393 0.96
7 25 0.03 3.9 10.1 0.1 1 23 432 454 432 454 0.96
8 25 0.083 11 8.7 0.2 1 23 493 515 493 515 0.96
9 25 0.03 3.9 10.1 0.1 1 23 554 576 554 576 0.96
10 25 0.03 3.9 10.1 0.1 1 23 582 604 582 604 0.96
11 25 0.03 3.9 10.1 0.1 1 23 643 665 643 665 0.96
12 25 0.03 3.9 10.1 0.1 1 23 704 726 704 726 0.96
13 25 0.03 3.9 10.1 0.1 1 23 765 787 765 787 0.96
14 25 0.03 3.9 10.1 0.1 1 23 826 848 826 848 0.96
15 25 0.033 4.1 10.0 0.2 1 23 887 909 887 909 0.96
16 25 0.03 3.9 10.1 0.1 1 23 948 970 948 970 0.96
17 25 0.03 3.9 10.1 0.1 1 23 1009 1031 1009 1031 0.96
18 25 0.03 3.9 10.1 0.1 1 23 1070 1092 1070 1092 0.96
19 25 0.03 3.9 10.1 0.1 1 23 1131 1153 1131 1153 0.96
20 25 0.03 3.9 10.1 0.1 1 23 1192 1214 1192 1214 0.96
21 25 0.03 3.9 10.1 0.1 1 23 1253 1275 1253 1275 0.96
22 25 0.03 3.9 10.1 0.1 1 23 1314 1336 1314 1336 0.96
23 25 0.03 3.9 10.1 0.1 1 23 1375 1397 1375 1397 0.96
24 25 0.03 3.9 10.1 0.1 1 23 1436 1458 1436 1458 0.96
25 25 5.8 7.4e+02 2.9 0.1 1 16 1497 1512 1497 1514 0.83

Sequence Information

Coding Sequence
ATGTGGGAGAACATGACCTCGGCCCGCACCATGCAATggtcgcggcgcgcgcgctcgccggcgccggcgctggCGCAGGCGgccacgccgccgccgctgccgccgccgtcgccgccgtCCGAGCcctcgccgccgcccgccgACCCCAGCCGGCCCTTCGTGTGCCGGCACTGCGGCGTGGGCTTCGCCAGGGAGAAGGCTCTGCAGTCACACTCGAGGGTGCACGGCGGTGACTCCCCCGTCGAGTGCGGCTCGTGCGGCGAGCTGTGCTGGTCGCGCGAGGCGCTCGCGGCGCACACGCGGCTGCGGCATCCGCACCAGCCGCCGCAGACGCAGCGGGAGCCCTACGACTCCAACTCGGGTGACGACGACATGGAGTACCAACTGTCGCCACTAGCTGACAGCGGCAGCGAGCGCGCCGTGTACGACACACAGCGCGGCCCCGAGCTGTTCTGCCAGGACTGCGGCGTCGCCTTCCAGCGCGCGGACTTACTGCGCCGGCATCAGGCCGCCGCGCACAGTCACAAGCGGCACGACAGTTCGTCGTCGACGTGGGCGGAGCACTCGTGCGACGTGTGCGGCGAGGCGTgcgccgacgcgctgcagctgcTCGCGCACGCCGAGCGCCACGCCGACCGCGTCGCGCCCTCCAGGTACACGACACGTCGCCACACTAACTGTGTCACTCGGTACAAGGTCACCTGTCACAAGCGGCACGACAGTTCGTCGTCGACGTGGGCGGAGCACTCGTGCGACGTGTGCGGCGAGGCGTgcgccgacgcgctgcagctgcTCGCGCACGCCGAGCGCCACGCCGACCGCGTCGCGCCCTCCAGGTACACGACACGTCGCCACACTAACTGTGTCACTCGGTACAAGGTCACCTGTCACAAGCGGCACGACAGTTCGTCGTCGACGTGGGCGGAGCACTCGTGCGACGTGTGCGGCGAGGCGTgcgccgacgcgctgcagctgcTCGCGCACGCCGAGCGTCACGCCGACCGCGTCGCGCCCTCCAGGTACACGACACGTCGCCACACTAACTGTGTCACTCGGTACAAGGTCACCTGTCACAAGCGGCACGACAGTTCGTCGTCGACGTGGGCGGAGCACTCGTGCGACGTGTGCGGCGAGGCGTgcgccgacgcgctgcagctgcTCGCGCACGCCGAGCGCCACGCCGACCGCGTCGCGCCCTCCAGGTACACGACACGTCGCCACACTAACCGTGTCACTCGGTACAAGGTCACCTGTCACAAGCGGCACGACAGTTCGTCGTCGACGTGGGCGGAGCACTCGTGCGACGTGTGCGGCGAGGCGTgcgccgacgcgctgcagctgcTCGCGCACGCCGAGCGTCACGCCGACCGCGTCGCGCCCTCCAGGTACACGACACGTCGCCACACTAACTGTGTCACTCGGTACAAGGTCACCTGTCACAAGCGGCACGACAGTTCGTCGTCGACGTGGGCGGAGCACTCGTGCGACGTGTGCGGCGAGGCGTGCGCCGACACGCTGCAGCTGCTCGCGCACGCCGAGCGCCACGCCGACCGCGTCGCGCCCTCCAGGTACACGACACGTCGCCACACTAACTGTGTCACTCGGTACAAGGTCACCTGTCACAAGCGGCACGACAGTTCGTCGTCGACGTGGGCGGAGCACTCGTGCGACGTGTGCGGCGAGGCGTgcgccgacgcgctgcagctgcTCGCGCACGCCGAGCGCCACGCCGACCGCGCGGAGCACTCGTGCGACGTGTGCGGCGAGGCGTgcgccgacgcgctgcagctgcTCGCGCACGCCGAGCGCCACGCCGACCGCGTCGCGCCCTCCAGGTACACGACACGTCGCCACACTAACTGTGTCACTCGGTACAAGGTCACCTGTCACAAGCGGCACGACAGTTCGTCGTCGACGTGGGCGGAGCACTCGTGCGACGTGTGCGGCGAGGCGTgcgccgacgcgctgcagctgcTCGCGCACGCCGAGCGCCACGCCGACCGCGTCGCGCCCTCCAGGTACACGACACGTCGCTACACTAACTGTGTCACTCGGTACAAGGTCACCTGTCACAAGCGGCACGACAGTTCGTCGTCGACGTGGGCGGAGCACTCGTGCGACGTGTGCGGCGAGGCGTgcgccgacgcgctgcagctgcTCGCGCACGCCGAGCGCCACGCCGACCGCGTCGCGCCCTCCAGGTACACGACACGTCGCCACACTAACTGTGTCACTCGGTACAAGGTCACCTGTCACAAGCGGCACGACAGTTCGTCGTCGACGTGGGCGGAGCACTCGTGCGACGTGTGCGGCGAGGCGTgcgccgacgcgctgcagctgcTCGCGCACGCCGAGCGCCACGCCGACCGCGTCGCGCCCTCCAGGTACACGACACGTCGCTACACTAACTGTGTCACTCGGTACAAGGTCACCTGTCACAAGCGGCACGACAGTTCGTCGTCGACGTGGGCGCAGCACTCGTGCGACGTGTGCGGCGAGGCGTgcgccgacgcgctgcagctgcTCGCGCACGCCGAGCGCCACGCCGACCGCGTCGCGCCCTCCAGGTACACGACACGTCGCCACACTAACTGTGTCACTCGGTACAAGGTCACCTGTCACAAGCGGCACGACAGTTCGTCGTCGACGTGGGCGGAGCACTCGTGCGACATGTGCGGCGAGGCGTgcgccgacgcgctgcagctgcTCGCGCACGCCGAGCGCCACGCCGACCGCGTCGCGCCCTCCAGGTACACGACACGTCGCCACACTAACTGTGTCACTCGGTACAAGGTCACCTGTCACAAGCGGCACGACAGTTCGTCGTCGACGTGGGCGGAGCACTCGTGCGACGTGTGCGGCGAGGCGTgcgccgacgcgctgcagctgcTCGCGCACGCCGAGCGCCACGCCGACCGCGTCGCGCCCTCCAGGTACACGACACGTCGCCACACTAACTGTGTCACTCGGTACAAGGTCACCTGTCACAAGCGGCACGACAGTTCGTCGTCGACGTGGGCGGAGCACTCGTGCGACGTGTGCGGCGAGGCGTgcgccgacgcgctgcagctgcTCGCGCACGCCGAGCGCCACGCCGACCGCGTCGCGCCCTCCAGGTACACGACACGTCGCCACACTAACTGTGTCACTCGGTACAAGGTCACCTGTCACAAGCGGCACGACAGTTCGTCGTCGACGTGGGCGGAGCACTCGTGCGACGTGTGCGGCGAGGCGTgcgccgacgcgctgcagctgcTCGCGCACGCCGAGCGCCACGCCGACCGCGTCGCGCCCTCCAGGTACACGACACGTCGCCACACTAACTGTGTCACTCGGTACAAGGTCACCTGTCACAAGCGGCACGACAGTTCGTCGTCGACGTGGGCGGAGCACTCGTGCGACGTGTGCGGCGAGGCGTgcgccgacgcgctgcagctgcTCGCGCACGCCGAGCGCCACACCGACCGCGTCGCGCCCTCCAGGTACACGACACGTCGCCACACTAACTGTGTCACTCGGTACAAGGTCACCTGTCACAAGCGGCACGACAGTTCGTCGTCGACGTGGGCGGAGCACTCGTGCGACGTGTGCGGCGAGGCGTgcgccgacgcgctgcagctgcTCGCGCACGCCGAGCGCCACGCCGACCGCGTCGCGCCCTCCAGGTACACGACACGTCGCCACACTAACTGTGTCACTCGGTACAAGGTCACCTGTCACAAGCGGCACGACAGTTCGTCGTCGACGTGGGCGGAGCACTCGTGCGACGTGTGCGGCGAGGCGTgcgccgacgcgctgcagctgcTCGCGCACGCCGAGCGCCACGCCGACCGCGTCGCGCCCTCCAGGTACACGACACGTCGCCACACTAACTGTGTCACTCGGTACAAGGTCACCTGTCACAAGCGGCACGACAGTTCGTCGTCGACGTGGGCGGAGCACTCGTGCGACGTGTGCGGCGAGGCGTgcgccgacgcgctgcagctgcTCGCGCACGCCGAGCGCCACGCCGACCGCGTCGCGCCCTCCAGGTACACGACACGTCGCCACACTAACTGTGTCACTCGGTACAAGGTCACCTGTCACAAGCGGCACGACAGTTCGTCGTCGACGTGGGCGGAGCACTCGTGCGACGTGTGCGGCGAGGCGTgcgccgacgcgctgcagctgcTCGCGCACGCCGAGCGCCACGCCGACCGCGTCGCGCCCTCCAGGTACACGACACGTCGCCACACTAACTGTGTCACTCGGTACAAGGTCACCTGTCACAAGCGGCACGACAGTTCGTCGTCGACGTGGGCGGAGCACTCGTGCGACGTGTGCGGCGAGGCGTgcgccgacgcgctgcagctgcTCGCGCACGCCGAGCGCCACGCCGACCGCGTCGCGCCCTCCAGGTACACGACACGTCGCCACACTAACTGTGTCACTCGGTACAAGGTCACCTGTCACAAGCGGCACGACAGTTCGTCGTCGACGTGGGCGGAGCACTCGTGCGACGTGTGCGGCGAGGCGTgcgccgacgcgctgcagctgcTCACATGTTAG
Protein Sequence
MWENMTSARTMQWSRRARSPAPALAQAATPPPLPPPSPPSEPSPPPADPSRPFVCRHCGVGFAREKALQSHSRVHGGDSPVECGSCGELCWSREALAAHTRLRHPHQPPQTQREPYDSNSGDDDMEYQLSPLADSGSERAVYDTQRGPELFCQDCGVAFQRADLLRRHQAAAHSHKRHDSSSSTWAEHSCDVCGEACADALQLLAHAERHADRVAPSRYTTRRHTNCVTRYKVTCHKRHDSSSSTWAEHSCDVCGEACADALQLLAHAERHADRVAPSRYTTRRHTNCVTRYKVTCHKRHDSSSSTWAEHSCDVCGEACADALQLLAHAERHADRVAPSRYTTRRHTNCVTRYKVTCHKRHDSSSSTWAEHSCDVCGEACADALQLLAHAERHADRVAPSRYTTRRHTNRVTRYKVTCHKRHDSSSSTWAEHSCDVCGEACADALQLLAHAERHADRVAPSRYTTRRHTNCVTRYKVTCHKRHDSSSSTWAEHSCDVCGEACADTLQLLAHAERHADRVAPSRYTTRRHTNCVTRYKVTCHKRHDSSSSTWAEHSCDVCGEACADALQLLAHAERHADRAEHSCDVCGEACADALQLLAHAERHADRVAPSRYTTRRHTNCVTRYKVTCHKRHDSSSSTWAEHSCDVCGEACADALQLLAHAERHADRVAPSRYTTRRYTNCVTRYKVTCHKRHDSSSSTWAEHSCDVCGEACADALQLLAHAERHADRVAPSRYTTRRHTNCVTRYKVTCHKRHDSSSSTWAEHSCDVCGEACADALQLLAHAERHADRVAPSRYTTRRYTNCVTRYKVTCHKRHDSSSSTWAQHSCDVCGEACADALQLLAHAERHADRVAPSRYTTRRHTNCVTRYKVTCHKRHDSSSSTWAEHSCDMCGEACADALQLLAHAERHADRVAPSRYTTRRHTNCVTRYKVTCHKRHDSSSSTWAEHSCDVCGEACADALQLLAHAERHADRVAPSRYTTRRHTNCVTRYKVTCHKRHDSSSSTWAEHSCDVCGEACADALQLLAHAERHADRVAPSRYTTRRHTNCVTRYKVTCHKRHDSSSSTWAEHSCDVCGEACADALQLLAHAERHADRVAPSRYTTRRHTNCVTRYKVTCHKRHDSSSSTWAEHSCDVCGEACADALQLLAHAERHTDRVAPSRYTTRRHTNCVTRYKVTCHKRHDSSSSTWAEHSCDVCGEACADALQLLAHAERHADRVAPSRYTTRRHTNCVTRYKVTCHKRHDSSSSTWAEHSCDVCGEACADALQLLAHAERHADRVAPSRYTTRRHTNCVTRYKVTCHKRHDSSSSTWAEHSCDVCGEACADALQLLAHAERHADRVAPSRYTTRRHTNCVTRYKVTCHKRHDSSSSTWAEHSCDVCGEACADALQLLAHAERHADRVAPSRYTTRRHTNCVTRYKVTCHKRHDSSSSTWAEHSCDVCGEACADALQLLAHAERHADRVAPSRYTTRRHTNCVTRYKVTCHKRHDSSSSTWAEHSCDVCGEACADALQLLTC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-