Ebru012568.1
Basic Information
- Insect
- Epinotia brunnichana
- Gene Symbol
- -
- Assembly
- GCA_963854355.1
- Location
- OY977937.1:438052-454913[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 27 1.2e-06 0.00015 23.9 5.4 1 23 145 167 145 167 0.99 2 27 0.0035 0.45 13.0 1.0 1 23 173 195 173 195 0.97 3 27 2.2e-06 0.00028 23.1 0.6 1 23 201 223 201 223 0.98 4 27 2.7e-05 0.0034 19.7 1.0 3 23 231 251 229 251 0.97 5 27 4e-05 0.0051 19.2 1.6 3 23 275 295 273 295 0.97 6 27 2.7e-05 0.0034 19.7 1.0 3 23 319 339 317 339 0.97 7 27 4e-05 0.0051 19.2 1.6 3 23 363 383 361 383 0.97 8 27 2.7e-05 0.0034 19.7 1.0 3 23 407 427 405 427 0.97 9 27 4e-05 0.0051 19.2 1.6 3 23 451 471 449 471 0.97 10 27 2.7e-05 0.0034 19.7 1.0 3 23 495 515 493 515 0.97 11 27 2.7e-05 0.0034 19.7 1.0 3 23 539 559 537 559 0.97 12 27 3.5e-05 0.0044 19.4 0.5 3 23 583 603 581 603 0.97 13 27 2.7e-05 0.0034 19.7 1.0 3 23 627 647 625 647 0.97 14 27 2.7e-05 0.0034 19.7 1.0 3 23 671 691 669 691 0.97 15 27 2.7e-05 0.0034 19.7 1.0 3 23 715 735 713 735 0.97 16 27 0.093 12 8.6 0.4 7 23 812 828 812 828 0.95 17 27 0.0076 0.97 12.0 0.2 1 23 850 872 850 872 0.95 18 27 0.0076 0.97 12.0 0.2 1 23 892 914 892 914 0.95 19 27 0.0076 0.97 12.0 0.2 1 23 934 956 934 956 0.95 20 27 0.0076 0.97 12.0 0.2 1 23 976 998 976 998 0.95 21 27 0.0076 0.97 12.0 0.2 1 23 1018 1040 1018 1040 0.95 22 27 0.0076 0.97 12.0 0.2 1 23 1060 1082 1060 1082 0.95 23 27 0.0076 0.97 12.0 0.2 1 23 1102 1124 1102 1124 0.95 24 27 2.8e-06 0.00035 22.8 2.9 1 23 1130 1153 1130 1153 0.97 25 27 5.1 6.5e+02 3.1 0.2 13 23 1183 1194 1179 1194 0.87 26 27 5.1 6.5e+02 3.1 0.2 13 23 1224 1235 1220 1235 0.87 27 27 5.1 6.5e+02 3.1 0.2 13 23 1265 1276 1261 1276 0.87
Sequence Information
- Coding Sequence
- ATGGAATCGAATGTTTGCGTTCAGTGCCTCAACAAGAAGATCATAAACTCGACAACCAACCGGTTGGTGACTGAGAGCTGTGGTCATGTTAAGTGTATGGAGTGTTTGTTGCACGAGAAGGGAGGTTGCGTCGCCTGTGCGGAGGGGACTAGTCCTAAGGAGCCGGAAGACACCCCGGACGTGTGCGAGGGACCTTCGGATGGTGACAACTTCCCCCTCAAACACTTCCTCCTGGGAGGGTGCCAGGAGAAGGATGCGCAGACTGAGTACTATTGTGATAAGAATGATAAGAAGAAAAAGCTGGAGACATCTCACATTAGGATAGAAACAGATGGGACACGGCGTTATTACTTCTGCACGGCATGCAAGAGGAAGTTCCAAGCCCGCAGCCAGGTCTCGTACCATGCTTACTGCAATGGACAGCAGAAGCCATACCAGTGCCCTGAGTGCAATAAGAGCTTCGCTTCGCACTCTCACTTCAAGTACCACATGCGCGTGCACCGCAACGAGCGCACGTACGCCTGCGAGCTGTGCGGCGACAGCTTCTTCCAAATGTCCAAGCTCCAGCGGCACAGGCTCAAGCACACAAAGGAGAAGAAGTACACGTGTCCAGAGTGCAACAAAGCGTTCAACAACCTGACATCTCTCCGCAAACACGCGCTCACGCACTCAGACGAGCGGCCGTACGGCTGCGAGACTTGCGGCCGGCGCTTCAGGGACTCCAGCAACTACCGCAAGCACGTGGCCAAACACAACGGTGAGCGACAACCTGACGTCTCCTACAAACACGCGCTCACGCACTCAGACGAGCGGCCGTACGGCTGCGAGACTTGCGGCCGGCGCTTCAGGGACTCCAGCAACTACCGCAAGCACGTGACCAAACACAACGGTGAGCGACAACCTGACGTCTCCTACAAACACGCGCTCACGCACTCAGACGAGCGGCCGTACGGCTGCGAGACTTGCGGCCGGCGCTTCAGGGACTCCAGCAACTACCGCAAGCACGTGGCCAAACACAACGGTGAGCGACAACCTGACGTCTCCTACAAACACGCGCTCACGCACTCAGACGAGCGGCCGTACGGCTGCGAGACTTGCGGCCGGCGCTTCAGGGACTCCAGCAACTACCGCAAGCACGTGACCAAACACAACGGTGAGCGACAACCTGACGTCTCCTACAAACACGCACTCACGCACTCAGACGAGCGGCCGTACGGCTGCGAGACTTGCGGCCGGCGCTTCAGGGACTCCAGCAACTACCGCAAGCACGTGGCCAAACACAACGGTGAGCGACAACCTGACGTCTCCTACAAACACGCGCTCACGCACTCAGACGTGCGGCCGTACGGCTGCGAGACTTGCGGCCGGCGCTTCAGGGACTCCAGCAACTACCGCAAGCACGTGACCAAACACAACGGTGAGCGACAACCTGACGTCTCCTACAAACACGCGCTCACGCACTCAGACGAGCGGCCGTACGGCTGCGAGACTTGCGGCCGGCGCTTCAGGGACTCCAGCAACTACCGCAAGCACGTGGCCAAACACAACGGTGAGCGACAACCTGACGTCTCCTACAAACACGCGCTCACGCACTCAGACGAGCGGCCGTACGGCTGCGAGACTTGCGGCCGGCGCTTCAGGGACTCCAGCAACTACCGCAAGCACGTGGCCAAACACAACGGTGAGCGACAACCTGACGTCTCCTACAAACACGCGCTCACGCACTCAGACGAGCGGCCGTACGGCTGCGAGACTTGCGGCTGGCGCTTCAGGGACTCCAGCAACTACCGCAAGCACGTGGCCAAACACAACGGTGAGCGACAACCTGACGTCTCCTACAAACACGCGCTCACGCACTCAGACGAGCGGCCGTACGGCTGCGAGACTTGCGGCCGGCGCTTCAGGGACTCCAGCAACTACCGCAAGCACGTGGCCAAACACAACGGTGAGCGACAACCTGACGTCTCCTACAAACACGCGCTCACGCACTCAGACGAGCGGCCGTACGGCTGCGAGACTTGCGGCCGGCGCTTCAGGGACTCCAGCAACTACCGCAAGCACGTGGCCAAACACAACGGTGAGCGACAACCTGACGTCTCCTACAAACACGCGCTCACGCACTCAGACGAGCGGCCGTACGGCTGCGAGACTTGCGGCCGGCGCTTCAGGGACTCCAGCAACTACCGCAAGCACGTGGCCAAACACAACGGTGAGCGACAACCTGACGTCTCCTACAAACACGCGCTCACGCACTCAGACGAGCGGCCGGCGCTTCAGGGACTCCAGCAACTACCGCAAGCACGTGGCCAAACACAACGACGAGCGGCCGGCGCTTCAGGGACTCCAGCAACTACCGCAAGCACGTGGCCAAACACAACGGTGAGCGACAACCTGACGTCTCCTACAAACACGCGCTCACGCACTCAGACGAGCGGCCGGCGCTTCAGGGACTCCAGCAACTACCGCAAGCACGTGGCCAAACACAACGGAGGCGGATGCGCGCGCGCGTGCTTGTGCGGCGCgtgcgggcggcggcgcgcgcgcgcgcacgtgtGCCCGCGCTGTCCGCAGGCCTTCACCGCGCGCAAGGACATGCGGCGCCACGCCGCCGTGCACTCAGGTCGGTACTGCGCGTGCTTGTGCGGCGCgtgcgggcggcggcgcgcgcgcgcgcacgtgtGCCCGCGCTGTCCGCAGGCCTTCACCGCGCGCAAGGACATGCGGCGCCACGCCGCCGTGCACTCAGGTCGGTACTGCGCGTGCTTGTGCGGCGCgtgcgggcggcggcgcgcgcgcgcgcacgtgtGCCCGCGCTGTCCGCAGGCCTTCACCGCGCGCAAGGACATGCGGCGCCACGCCGCCGTGCACTCAGGTCGGTACTGCGCGTGCTTGTGCGGCGCgtgcgggcggcggcgcgcgcgcgcgcacgtgtGCCCGCGCTGTCCGCAGGCCTTCACCGCGCGCAAGGACATGCGGCGCCACGCCGCCGTGCACTCAGGTCGGTACTGCGCGTGCTTGTGCGGCGCgtgcgggcggcggcgcgcgcgcgcgcacgtgtGCCCGCGCTGTCCGCAGGCCTTCACCGCGCGCAAGGACATGCGGCGCCACGCCGCCGTGCACTCAGGTCGGTACTGCGCGTGCTTGTGCGGCGCgtgcgggcggcggcgcgcgcgcgcgcacgtgtGCCCGCGCTGTCCGCAGGCCTTCACCGCGCGCAAGGACATGCGGCGCCACGCCGCCGTGCACTCAGGTCGGTACTGCGCGTGCTTGTGCGGCGCgtgcgggcggcggcgcgcgcgcgcgcacgtgtGCCCGCGCTGTCCGCAGGCCTTCACCGCGCGCAAGGACATGCGGCGCCACGCCGCCGTGCACTCAGATTTGAAGCCATTCCGTTGCCGCGTGTGCTCGCGCCGCTTCCGGCGGAAAGACAACCTGGAGCGGCACATCCGCAACACGCACCCCGCCGagccgcccgccgccgccgtccTCTGCGAGCCCGAGGACTGCGCCAAGCACAAGGTAGCCCCCCGTGTCAGTAGCAGGCTAGCTGACAACCTGGAGCGGCACATCCGCAACACGCACCCCGCCGagccgcccgccgccgccgtccTCTGCGAGCCCGAGGACTGCGCCAAGCACAAGGTAGCCCCCCGTGTCAGTAGCAGGCTAGCTGACAACCTGGAGCGGCACATCCGCAACACGCACCCCGCCGagccgcccgccgccgccgtccTCTGCGAGCCCGAGGACTGCGCCAAGCACAAGGTAGCCCCCCGTGTCAGTAGCAGGCTAGCTGACAACCTGGAGCGGCACATCCGCAACACGCACCCCGCCGagccgcccgccgccgccgtccTCTGCGAGCCCGAGGACTGCGCCAAGCACAAGGTGTTCCAGAACGACAAGCTCGACCCCAACAAAGAGAAGACTAAGTTGGAGAGTCTCAACCCGCTGCCTCCACTGCCGCATGAGATTATTCAGAAGCATATGCACGAAGATCAGAAGGTTAACCGACGTCTGATCGCGCTGCTCCCACCCATCGACGAGCGCAGGTTCCAGGAGCTTTGCAAGTTCGGTCCGCAGGTAATACAATACACAAGCATACAAACTAGGGAATGA
- Protein Sequence
- MESNVCVQCLNKKIINSTTNRLVTESCGHVKCMECLLHEKGGCVACAEGTSPKEPEDTPDVCEGPSDGDNFPLKHFLLGGCQEKDAQTEYYCDKNDKKKKLETSHIRIETDGTRRYYFCTACKRKFQARSQVSYHAYCNGQQKPYQCPECNKSFASHSHFKYHMRVHRNERTYACELCGDSFFQMSKLQRHRLKHTKEKKYTCPECNKAFNNLTSLRKHALTHSDERPYGCETCGRRFRDSSNYRKHVAKHNGERQPDVSYKHALTHSDERPYGCETCGRRFRDSSNYRKHVTKHNGERQPDVSYKHALTHSDERPYGCETCGRRFRDSSNYRKHVAKHNGERQPDVSYKHALTHSDERPYGCETCGRRFRDSSNYRKHVTKHNGERQPDVSYKHALTHSDERPYGCETCGRRFRDSSNYRKHVAKHNGERQPDVSYKHALTHSDVRPYGCETCGRRFRDSSNYRKHVTKHNGERQPDVSYKHALTHSDERPYGCETCGRRFRDSSNYRKHVAKHNGERQPDVSYKHALTHSDERPYGCETCGRRFRDSSNYRKHVAKHNGERQPDVSYKHALTHSDERPYGCETCGWRFRDSSNYRKHVAKHNGERQPDVSYKHALTHSDERPYGCETCGRRFRDSSNYRKHVAKHNGERQPDVSYKHALTHSDERPYGCETCGRRFRDSSNYRKHVAKHNGERQPDVSYKHALTHSDERPYGCETCGRRFRDSSNYRKHVAKHNGERQPDVSYKHALTHSDERPALQGLQQLPQARGQTQRRAAGASGTPATTASTWPNTTVSDNLTSPTNTRSRTQTSGRRFRDSSNYRKHVAKHNGGGCARACLCGACGRRRARAHVCPRCPQAFTARKDMRRHAAVHSGRYCACLCGACGRRRARAHVCPRCPQAFTARKDMRRHAAVHSGRYCACLCGACGRRRARAHVCPRCPQAFTARKDMRRHAAVHSGRYCACLCGACGRRRARAHVCPRCPQAFTARKDMRRHAAVHSGRYCACLCGACGRRRARAHVCPRCPQAFTARKDMRRHAAVHSGRYCACLCGACGRRRARAHVCPRCPQAFTARKDMRRHAAVHSGRYCACLCGACGRRRARAHVCPRCPQAFTARKDMRRHAAVHSDLKPFRCRVCSRRFRRKDNLERHIRNTHPAEPPAAAVLCEPEDCAKHKVAPRVSSRLADNLERHIRNTHPAEPPAAAVLCEPEDCAKHKVAPRVSSRLADNLERHIRNTHPAEPPAAAVLCEPEDCAKHKVAPRVSSRLADNLERHIRNTHPAEPPAAAVLCEPEDCAKHKVFQNDKLDPNKEKTKLESLNPLPPLPHEIIQKHMHEDQKVNRRLIALLPPIDERRFQELCKFGPQVIQYTSIQTRE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -