Ebru026341.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Epinotia brunnichana
Gene Symbol
-
Assembly
GCA_963854355.1
Location
OY977942.1:10600369-10639448[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 32 0.0002 0.026 16.9 1.5 1 23 409 431 409 431 0.96
2 32 0.0099 1.3 11.6 0.6 1 20 437 456 437 459 0.94
3 32 7e-05 0.009 18.4 4.6 1 23 478 500 478 500 0.98
4 32 0.00044 0.057 15.9 4.7 1 23 506 528 506 528 0.99
5 32 8.8e-05 0.011 18.1 5.3 1 23 534 556 534 556 0.97
6 32 1.9e-05 0.0024 20.2 7.1 1 23 562 584 562 584 0.97
7 32 1.7e-06 0.00022 23.5 2.9 1 23 590 612 590 612 0.97
8 32 0.00024 0.031 16.7 6.7 1 23 618 640 618 640 0.97
9 32 4.6e-05 0.0059 19.0 6.4 1 23 646 668 646 668 0.98
10 32 0.0012 0.16 14.5 0.5 1 16 674 689 674 691 0.96
11 32 2.6e-05 0.0033 19.7 3.9 2 23 705 726 704 726 0.97
12 32 0.0012 0.16 14.5 0.5 1 16 732 747 732 749 0.96
13 32 2.6e-05 0.0033 19.7 3.9 2 23 763 784 762 784 0.97
14 32 0.0012 0.16 14.5 0.5 1 16 790 805 790 807 0.96
15 32 2.6e-05 0.0033 19.7 3.9 2 23 821 842 820 842 0.97
16 32 0.0012 0.16 14.5 0.5 1 16 848 863 848 865 0.96
17 32 2.6e-05 0.0033 19.7 3.9 2 23 901 922 900 922 0.97
18 32 0.0012 0.16 14.5 0.5 1 16 928 943 928 945 0.96
19 32 2.6e-05 0.0033 19.7 3.9 2 23 959 980 958 980 0.97
20 32 0.0012 0.16 14.5 0.5 1 16 986 1001 986 1003 0.96
21 32 2.6e-05 0.0033 19.7 3.9 2 23 1017 1038 1016 1038 0.97
22 32 1.2e-06 0.00015 24.0 1.9 1 23 1044 1066 1044 1066 0.98
23 32 0.00012 0.015 17.7 7.9 1 23 1072 1094 1072 1094 0.98
24 32 6e-05 0.0076 18.6 6.4 1 23 1100 1122 1100 1122 0.98
25 32 3.1e-05 0.004 19.5 5.4 1 23 1128 1150 1128 1150 0.98
26 32 5.7e-06 0.00072 21.8 6.1 1 23 1156 1178 1156 1178 0.97
27 32 5.2e-05 0.0066 18.8 7.1 1 23 1184 1206 1184 1206 0.97
28 32 7.2e-06 0.00092 21.5 6.0 1 23 1212 1234 1212 1234 0.98
29 32 0.00032 0.041 16.3 10.0 1 23 1240 1262 1240 1262 0.97
30 32 3.2e-06 0.00041 22.6 4.0 1 23 1268 1290 1268 1290 0.97
31 32 0.0017 0.22 14.0 0.3 1 23 1297 1319 1297 1319 0.96
32 32 0.071 9.1 8.9 5.1 1 23 1329 1351 1329 1351 0.99

Sequence Information

Coding Sequence
ATGAATTCGGAGCATCACAATATCAACACGGGTGGCGGCCAGCCCCCAGGAAATTCAGAGcagcagcagcagactGCGAATCTGACCCCGACGACGTCTGCCACGGACCTGCGAGTGAACTCGGCGGCCGTAAACGTCGCTTTGTCTAGCGTCGCGAAGTACTGGGTGTTTACAAATCTTTTCCCGGGGCCTATACCGCAAGTGTCGGTATATGGGCTGCCCACTGGAACGAGAATAGAAAATGGAAAACCAGTGCAGGACCTTGGTCAAGCCCATGCAAGCATACTCAATGGTGATCCCAACATTATACTTGGACATCCGGGACAGACCCAAGTTACTGTATCAGCAGCGCAACAGTTACCACAGATTATTGCCACACAGACACAAACACATGATGTCCTAGCTCATGTCCAGCAGCAAGAGCTATCCCAGCAAGGCACGGGCAGCGGACAGTTGACAACTAACACGGGTCAAACAACTCATCAGCAGGTAGCCAATAATCGGGTCGAGTTTGTACACCATAACATTGATATGGTAAATCACGTGGGTCACCACTCGCAACAACACATAATGCAGCAACAGCTAATGGCGGCGACGCGCCCAGACCACTCCAACCAGCAGATCCAGCTAACAGTGAGTGAAGACGGGATCGTCACCGTGGTAGACCCGGGCGGGGGCAAGCTCGTGGATAAAGAGGACCTGCATGAGGCCATCAAGATGCCAGCAGACCACACCCTCACTGTGCATCAGCTTCAACAAATTGTGGGGCAACAGGTGCTAGAAAACGTAGTCCGCATCGAGCAAGCCACCGGCGAGCCGGCGAACATTCTCGTAACGCAGAACCCCGACGGAACCACGTCCATAGAGGCCAGCGCCGCGGATCCGCTCGCCATCGTCAAGGACGAGAAGAGCGGCTCCAAGATAGAGACTGCGCACTTCGCGCTGCCCGCCGAGATCAAGGACCTTAAGAGCATTGACTTAAAGAGTGTAGGAGCGATGGGGATGGAAGGAGCCGTGGTGAAGATATCAGCGGGGGCCTCGGACCACGACATGCACGCCATGTACAAAGTGAACGTGGAGGATCTGTCGCAGCTGCTCGCCTACCACGAGGTGTTTGGCAAACTCAATGCTGACGGCCAGCCCCAAACCAAAGTAATAGGAGAAGTGGAGGTAGAAGCGGGAACTAGCGCCACCATGTCGGCAGAGGAGGGCTCGCCCGGACACCACGCGTGTGATATTTGTGGGAAAATTTTTCAATTTCGATACCAACTCATTGTGCACAGACGGTACCACGGTGAAAGGAAACCTTTCACGTGTCAAGTATGCGGCTCCGCCTTCGCCAATCCCGTGGAGCTGTCGAGACACGGGAAATGCCATCTTGCCGGCGACTCAGCAGACAGAACTGCTAAGCGGTTGACGCAGGACAAGCCGTACGCGTGCACGACCTGCCATAAAACCTTCGCGCGCAAGGAGCATCTCGACAACCACGTGCGCAGCCACACCGGGGAGACGCCCTACAGATGTCAATTCTGCGCGAAGACCTTCACCCGCAAGGAGCACATGGTGAACCACGTCCGCAAGCACACGGGCGAGACCCCACACCGCTGCGACATCTGCAAGAAGAGCTTTACGAGGAAAGAGCACTTCATGAACCACGTCATGTGGCATACAGGTGAAACTCCACACCATTGTCAAATATGCGGAAAGAAGTATACTAGGAAGGAGCACTTAGCGAACCATATGAGATCACATACGAATGATACCCCATTCCGCTGCGAACTCTGTGGGAAGTCTTTCACGAGAAAGGAACACTTCACCAATCACATTCTGTGGCATACCGGCGAAACCCCCCACCGCTGCGACTTCTGCTCGAAAACCTTCACGCGCAAAGAGCACCTCCTCAACCACGTGCGACAGCACACGGGCGAGTCGCCGCACAGATGCAACTACTGCTCCAAGTCCTTCACGCGCCGCGAGCACCTCGTCAACCACGTGCGGCAGCACACCGGCGAGACGCCCTTCCAGTGCGGCTACTGTCCCAAGGCCTTCACCCGCAAGGACCACCTAGGTAACGTCACATCCATAGTCACGATGCAACTACTGCTCCAATCACGATGCAACTACTGCTCCAAGTCCTTCACGCGCCGCGAGCACCTCGTCAACCACGTGCGGCAGCACACCGGCGAGACGCCCTTCCAGTGCGGCTACTGTCCCAAGGCCTTCACCCGCAAGGACCACCTAGGTAACGTCACATCCATAGTCACGATGCAACTACTGCTCCAATCACGATGCAACTACTGCTCCAAGTCCTTCACGCGCCGCGAGCACCTCGTCAACCACGTGCGGCAGCACACCGGCGAGACGCCCTTCCAGTGCGGCTACTGTCCCAAGGCCTTCACCCGCAAGGACCACCTAGGTAACGTCACATCCATAGTCACGATGCAACTACTGCTCCAATCACGATGCAACTACTGCTCCAAGTCCTTCACGCGCCGCGAGCACCTCGTCAACCACGTGCGGCAGCACACCGGCGAGACGCCCTTCCAGTGCGGCTACTGTCCCAAGGCCTTCACCCGCAAGGACCACCTAGGTAACGTCACATCCATAGTCACGATGCAACTACTGCTCCAAGTCCTTCACGCGCCGCGAGCACCTCGTCAACCACGTGCGGCAGCACACCGGCGAGACGCCCTTCCATCACGATGCAACTACTGCTCCAAGTCCTTCACGCGCCGCGAGCACCTCGTCAACCACGTGCGGCAGCACACCGGCGAGACGCCCTTCCAGTGCGGCTACTGTCCCAAGGCCTTCACCCGCAAGGACCACCTAGGTAACGTCACATCCATAGTCACGATGCAACTACTGCTCCAATCACGATGCAACTACTGCTCCAAGTCCTTCACGCGCCGCGAGCACCTCGTCAACCACGTGCGGCAGCACACCGGCGAGACGCCCTTCCAGTGCGGCTACTGTCCCAAGGCCTTCACCCGCAAGGACCACCTAGGTAACGTCACATCCATAGTCACGATGCAACTACTGCTCCAATCACGATGCAACTACTGCTCCAAGTCCTTCACGCGCCGCGAGCACCTCGTCAACCACGTGCGGCAGCACACCGGCGAGACGCCCTTCCAGTGCGGCTACTGTCCCAAGGCCTTCACCCGCAAGGACCACCTAGTGAATCACGTGCGACAGCACACCGGCGAGTCGCCCCACAAATGCTCGTTCTGCACCAAGTCCTTCACGCGCAAGGAGCACCTCACCAACCACGTGCGGCAGCACACGGGCGAGTCGCCGCACAGGTGCACCTACTGCGCCAAATCGTTCACTAGGAAGGAGCATCTCAACAACCACGTCAGACAGCATACGGGGGAAACGCCGCACAAGTGTACGTTCTGCCCGAAGGCGTACTCGCGGAAGGAGCACCTGAACAACCACATACGGCAGCACACGGGCGACGCGCCGCACTCGTGCACCTACTGCAACAAGAGCTTCTCGAGGAAGGAGCACCTCGTCAACCATATTCGACAACACACGGGCGAGACGCCGTTCAAGTGCACCTACTGCTCGAAGTCGTTCTCCCGCAAGGAGCACCTCACGAACCACGTGCACCTCCACACGGGCGAGACGCCGCACAAGTGCCCCTTCTGCACCAAGACCTTCTCGCGCAAGGAGCACCTGACCAACCACGTCAGGATACACACGGGCGAGTCGCCTCACCGCTGCGAGTTCTGCCACAAGACGTTCACGCGCAAGGAGCACCTCACCAACCACCTCAAGCAGCACACGGGCGACACGCCGCACTCCTGCAAGGTCTGCTCCAAGGCCTTCACTCGCAAGGAGCACCTCGTCGCGCACATGAGATCGCACAGCTGCGGCGAGCGGCCGTTCAGCTGCGGCGAGTGCGGCAAGTCGTTCCCGCTGAAAGGCAACCTGCTGTTCCACGAGCGCTCGCACAACAAGAACGGCGGCGGCGCAAGGCCCTTCCGCTGCGAGGTCTGCTCCAAGGACTTCATGTGCAAAGGTCACCTGGCGTCGCACCGGCGCACGCACGCGGCGGGCGCGGACGCGGGCGCGGAGGCGGAAGCGGAAGcggacgcgggcgcgggcgcgggcgccgagCCCGAGGACTGCGGCGACTGCGTCAAGTGCGAGAAGGACGCGCCCGAGCCCGAGCGGAAACACGTGCTCAGACCGGCTGCGGACCCGAGGCCGGCTGAAAGCACTGTACCACAAAACCCCCAACCAAATGCAACTGTGATGCAAATTACCAGCCAACAGGTCCGCGCGCCGGCCGGCGTGGCGCTGGACGCGGCGGGCGCCACCTTCGCGCATCCCGTCACCGTCACTTACTAG
Protein Sequence
MNSEHHNINTGGGQPPGNSEQQQQTANLTPTTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTGTRIENGKPVQDLGQAHASILNGDPNIILGHPGQTQVTVSAAQQLPQIIATQTQTHDVLAHVQQQELSQQGTGSGQLTTNTGQTTHQQVANNRVEFVHHNIDMVNHVGHHSQQHIMQQQLMAATRPDHSNQQIQLTVSEDGIVTVVDPGGGKLVDKEDLHEAIKMPADHTLTVHQLQQIVGQQVLENVVRIEQATGEPANILVTQNPDGTTSIEASAADPLAIVKDEKSGSKIETAHFALPAEIKDLKSIDLKSVGAMGMEGAVVKISAGASDHDMHAMYKVNVEDLSQLLAYHEVFGKLNADGQPQTKVIGEVEVEAGTSATMSAEEGSPGHHACDICGKIFQFRYQLIVHRRYHGERKPFTCQVCGSAFANPVELSRHGKCHLAGDSADRTAKRLTQDKPYACTTCHKTFARKEHLDNHVRSHTGETPYRCQFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRKEHLANHMRSHTNDTPFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNYCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLGNVTSIVTMQLLLQSRCNYCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLGNVTSIVTMQLLLQSRCNYCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLGNVTSIVTMQLLLQSRCNYCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLGNVTSIVTMQLLLQVLHAPRAPRQPRAAAHRRDALPSRCNYCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLGNVTSIVTMQLLLQSRCNYCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLGNVTSIVTMQLLLQSRCNYCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLNNHVRQHTGETPHKCTFCPKAYSRKEHLNNHIRQHTGDAPHSCTYCNKSFSRKEHLVNHIRQHTGETPFKCTYCSKSFSRKEHLTNHVHLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCEFCHKTFTRKEHLTNHLKQHTGDTPHSCKVCSKAFTRKEHLVAHMRSHSCGERPFSCGECGKSFPLKGNLLFHERSHNKNGGGARPFRCEVCSKDFMCKGHLASHRRTHAAGADAGAEAEAEADAGAGAGAEPEDCGDCVKCEKDAPEPERKHVLRPAADPRPAESTVPQNPQPNATVMQITSQQVRAPAGVALDAAGATFAHPVTVTY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00657450;
90% Identity
iTF_00657450;
80% Identity
iTF_00657450;