Basic Information

Insect: Epinotia brunnichana
Gene Symbol: -
Assembly: GCA_963854355.1
Location: OY977944.1:15261883-15264099[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 5.2e-09 5e-06 28.1 0.0 4 39 14 49 11 52 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	5.2e-09	5e-06	28.1	0.0	4	39	14	49	11	52	0.91

Sequence Information

Coding Sequence: ATGAATACAAGTAAAAAGAAACTTAAGTACACAGATGTGCAGCTACAAAGTGCTATATCAGCCGTTAAAGAAGGCATGAGTATTTCAGAAGCTTCACAAAAATTCTGTATTCCAAAAGCTACTCTTCATGataaagtaaacaaaaaatatcctgaAGGTGCAACTCCGGGTGCACACACTGTGCTCAATCAAAATGAAGAAAAACAACTTGTAACTTGGATACTGTACCTTAGCGATGTTGGGTTTCGAATAACAAAACACAATCTTATTCACTCAGTGAAAAATCTTGTGGCCAACTTACAAAGAGAAAACCCTTTTAAAAATGGCAGACCTGTTCGGCATTGGTATGAGGGTTTTATGTCCAGACACCCCGAGCTTTCAACGAGAGTATCACAAAGTCTTACTGCCCCAAGAGCTAATATTACGGAGGAATCCATTCGAGCATGGTTTAATAGCGtcgaaacatatttaaaaaaagaaaacttaGAGGAAGTTTTGACTGATCCGCGGCGAATATTTAATTGTGATGAATCAGCATTTTATTTGAGTCCCAAAGAAAACTCAGTAATAGTAAAAAAAGGCAGCAATAGAGTTTACAGTAAAACTGCCAACGATGAAAAAGAATGCCTCACCGTTTTGATAACAGTTTCAGCGGACGGAAATATGCAGCCGCCTTTAGTTATATTTCCCTACAAACGAACACCAGCTAGCGTTATATTAAACATGCCACCTAAATGGGGAATTGGTCGCTCAGATTCCGGTTGGATGACTGGGGAAACTTTCTACGAACAGATAACAAACGTTTTCTATCCCTGGCTGATTGATTACAACATTCCTCTCCCAGTAATTTTATTCATGGATGGCCATTCATCACATATCAATTTGCCGCTATCCGAGTTCTGCCGAGAGAAAAAAATAATCTTAGTTGCGCTCCTGCCCAACTCCACGCACCGTCTTCAGCCGCTAGACGTCGCAGTTTTTCGTCCATTAAAGCACCACTGGAAAAAGCATAGACAAACCGATCAATCAGATAGAAAGTTAAGAAAAGAGGATTTTTCGAAAGCGTTGGATCAGTGCATAAAAAATGTTGCGTTAAGTGGCGCAATAATTAATGGCTTCAGAATTTGCGGTTTGTCTCCTTTCGATCCAAATAGTATTGATTATGCGAAACTTATTAAAAAAGTCACAACAAGTAACAACAATAGTACAAAAGAACTGCCGACCAAGACAACAAGGACAATAGGTACATTACTAGCTGAAGTGGAAATGAGAATTCCAGAAACCGAACTCGAAGAATTCCGGATGTGTGGAGACACGTGGTTGGATATAGTCCTCGATGCGCAGTCGCATTGCCTCTCTGAAAACATTACCGAAAAAACAACCACGACTAACAGTCACTTAATAGACGGCATCAAATCGTGTCACTACACGGGGCCTCCAGAATTGTACCACGTGACTCCACCAAAAACCATCCAACCTGGCAATCGATCCGTTCTAGCCGATATATCAAATCAAGCTTGCCTCTCTGAAAATACTAACGAAATAATGAATATGTCAGGAACTTCAACGGCGCTAGAAAATGTTCATTTAAACCATAAAAGTCCTATcgaaaaaaaccagccaagtgatATCATGACTCCAGAATCGCTCCACCAGACTCCAGTAAAAGCAATCCAAGCTGAGAGCCGGTCGGTCCTAACTCCACTAAAAACTGTTACTTTTGAAGACATGGCTGTTTTACAGAACCACACGTACAGTACTCCAGATAAACTTCAGGAAAATAGTACTGAGAGAAACACCCCAAGTTGTAGTAGTAATCGCAATATCCCGACACCACTAAAAAATATTAGGACACCATTTAAAAATGCTTTGTTTTGGCCAAATGCACCGAAAAAAGACGACAAACTTAGAATTATAAAGAAACTTACACCCACAGTTGCAACATCTGAAGAATTTATTGCCTATCAGAAAAAAATTGATGctgagaaaaaataa
Protein Sequence: MNTSKKKLKYTDVQLQSAISAVKEGMSISEASQKFCIPKATLHDKVNKKYPEGATPGAHTVLNQNEEKQLVTWILYLSDVGFRITKHNLIHSVKNLVANLQRENPFKNGRPVRHWYEGFMSRHPELSTRVSQSLTAPRANITEESIRAWFNSVETYLKKENLEEVLTDPRRIFNCDESAFYLSPKENSVIVKKGSNRVYSKTANDEKECLTVLITVSADGNMQPPLVIFPYKRTPASVILNMPPKWGIGRSDSGWMTGETFYEQITNVFYPWLIDYNIPLPVILFMDGHSSHINLPLSEFCREKKIILVALLPNSTHRLQPLDVAVFRPLKHHWKKHRQTDQSDRKLRKEDFSKALDQCIKNVALSGAIINGFRICGLSPFDPNSIDYAKLIKKVTTSNNNSTKELPTKTTRTIGTLLAEVEMRIPETELEEFRMCGDTWLDIVLDAQSHCLSENITEKTTTTNSHLIDGIKSCHYTGPPELYHVTPPKTIQPGNRSVLADISNQACLSENTNEIMNMSGTSTALENVHLNHKSPIEKNQPSDIMTPESLHQTPVKAIQAESRSVLTPLKTVTFEDMAVLQNHTYSTPDKLQENSTERNTPSCSSNRNIPTPLKNIRTPFKNALFWPNAPKKDDKLRIIKKLTPTVATSEEFIAYQKKIDAEKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -