Basic Information

Gene Symbol
kn
Assembly
GCA_963854355.1
Location
OY977948.1:10986655-11004734[-]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 7.8e-54 2e-49 170.5 0.0 11 135 99 213 90 216 0.93

Sequence Information

Coding Sequence
ATGATGATCGCGAATAAAAAACACAGAAATTCAAAAGATCCGCGCTTTCCGCTCGTGTCGGTCCGGGAGTGTTCGTCGGTGATTCGGGCCGGGTTCGCGATTCGGTCGGACGAGCTGAACGCGGCGGCGGGCGGGTACTCGGGCTCGCCGTGGCCGCCGCTCGAGCTCGACCCGGTGGGATGGGGACGGAAGCTGTACCCGCCGGCCGCGCCGAGATCTTCAGGAGGGCTGATGTTCGGCCTGCACCATCAGGAGGCCGGCGGGCTGCACGCGCAACCGCGCGGCCCCGTCACCTCGCTCAAAGAAGAACCGCTCACGCGCGCTTGGATGACACCCAGCTCGCTAGTTGACAATACCAATACCGTAGGCGTCGGCCGCGCGCACTTTGAAAAGCAGCCGCCGAGCAACCTGCGCAAGAGCAACTTCTTCCACTTCGTGGTGGCGCTGTACGACCGCTCCGGGCAGCCGGTGGAGATCGAGCGCACCGCCTTCATCGGCTTCATCGAGAAGGACCAGGAAGCTGAAGGCCAGAAAACAAATAACGGGATCCAGTATAGGCTACAATTACTTTATGCAAATGGTATCAGACAAGAGCAAGACATATTTGTTCGACTAATAGACTCAGTAACCAAACAGGTAAGATTTTTAAGATAA
Protein Sequence
MMIANKKHRNSKDPRFPLVSVRECSSVIRAGFAIRSDELNAAAGGYSGSPWPPLELDPVGWGRKLYPPAAPRSSGGLMFGLHHQEAGGLHAQPRGPVTSLKEEPLTRAWMTPSSLVDNTNTVGVGRAHFEKQPPSNLRKSNFFHFVVALYDRSGQPVEIERTAFIGFIEKDQEAEGQKTNNGIQYRLQLLYANGIRQEQDIFVRLIDSVTKQVRFLR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00655883;
90% Identity
iTF_00655883;
80% Identity
-