Ebru003520.1
Basic Information
- Insect
- Epinotia brunnichana
- Gene Symbol
- Jarid2
- Assembly
- GCA_963854355.1
- Location
- OY977935.1:6825598-6866616[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.3e-17 1.8e-13 52.7 0.0 7 88 485 563 481 564 0.90
Sequence Information
- Coding Sequence
- ATGATGGCAGATGGCATTAGAAAGACAAATAACCTGCAAATATTCCAAGACGATGAAGGTTTATTAAAAGTCCGTACAAAACTTGTACTGTGTGATGAGCCCGCCGACTTCATCTGTCCTTTATTTTTACCTGGGAAGCATCTTATAATTAAAAGACTAGTCGCTTCGAAGCACCAGCTTTTGCATCACGTTGGCCCTGGTACACTAATGACAGTACTCAGAGAGAAGTATTCGATTACGGGCATAAGAAGACTCCTCAGCTCAACCGTTTCAAAATGCATATCCTGCAAGCGGCAATCTGTAAAGCATGCTGACACACCATTGGCCCCTTTGTCTCTAGATAGAGTGAAACCAGCTGCCGGATTTGAGGTGACAGGGAGTAACTGCCCGTCGTCTCCATGCAGCACACTAGTGTTGGCACCGTCGCCCAATATCAGCGTCGACTTTGATGCCGAGTCAGCGAGCGGACAAGACTGGTGTATACCTGATGGAATTTTCAAAACGGAGACCCCAGAAACTACACCTGGAAACACGCCAGTACCGTGGGGCCAAATACAGGACCCTATCAACGAAGAAAACGACAATGAAGATTCCCAGAAACGAGACAGTGAACCGAAGCTTGGTGCTCAAAAGAATATGGAAGAGCTAGTCGTTAGCAATATCGAGACACAGACTCCCCAGAAAGAATTAGCGCTGGTGTGTGCCCTTGAGAATCGTGTCAATGAGACGGTTGCGGAGAAGGCAACTCCCGAACCAACTGAGAAGAATTCTATAAAGGAGAGCGCACGGGAGTTACAACCGCCCAACCCGGACGTTTACGACTTCGACGCGGAGCTTGAAGCCTCGCGACCCCCCTCGAGTCTCCGGCGGCGAGGGCAGTCGACCCCCGTACCGGCCCCACCGGCCCCCAGACCCCCCAGCTCCGAGAGCGTCGAATACGTGGACATACTGCCCACCAGCTCGCACTGCATACAGATAAAACCCTCGAAACAGCAACAGAGCGGGGCGGAGTGCCTAAGTGTCAGCCTGGTTCCGAAAGAGGAAATtagtttaaagaaaaaaaaaaacatgatcgAGAACCTTTCGAACAGCCCGGCGCTTCTGGACAAGCTGTTCAATTGTCTCACGGCAGAACAGCAGACCGAATTGGACAACTTCATAACAGCTGAAGGGCTGAACGACCAGCCTTCTACTAGTTCCACATATTTGGACCAACAAGCGGGCTCTGTCTTCGAAGCGCCCACCTTTTATCCGACTGCTGAGGAGTTTGCGGACCCAATCaaatattatgataaaatcGCCCCTCAAGCTTCAAGATACGgtctgtgtaagattgtccccccaGAGGACTTCAAGCCGCCTTGTATAATGAACGACACGATCCGGTTCGCCGTAATATATCAATACATCTCCAAGATGTACAGCCGGTGGGGACCAGTATCTAGGGAGCTGGCGGCAATCAAGGCGCACCTACGAACGCAGAGCGTCGTTTTCGATCGGGCCCCACTCTTAGACGGCAGCGAGGTTAACCTGCCGAAGCTATACCACGCGGTCGAGCGCAACGGGGGGTTAAGCAATGTCATCCAACGCAAGCGCTGGGGCCGGGTCGCTGATGAAATGAAGCTGAGCAAGCTACAGCACCCGGAGAGGAAGCTCGACCCTATTTACATGCGGTTCCTGTTGCCGTACGCCACGCTCTCCGACCAGGAGCGTCAGAACATAATGGCAAATGTAGAAAAATGTTGGACGACGAAATACCAGCATATGCTGGAGCGAGCCCGCAACCCGTTTCAGCGTCAAAATAGAATGTTGGGCGCCGAGGAGTCAGAGTCCGATGACGAGGGCGAGGACGGTCACACGGCGGGAGCATTACACGAGGCCGAGGACTGCATCGTGCAGGGCCGAGTAATGAACCTCGTCACCTTTAAAAAGATTGCTACAACGCTCATGGACGCACACTTCGAACCCAACAAGCAGCCGCCGAGCGCGATCGAAGTGGAGAAGGCCTATTGGCGCGCCGTGCTGCTCGGCACCGAGCACATTGTTGCGAACACGGCATCGATAGATACTGGCGAAGAAGGGTACGGGTTCCCTAAAGACCCCGAGGCAGAATATGGCACCCACCCGTGGAACCTGAAGGTGCTAGCACGGAACCCGCACAACGTCCTCCGGTACCTAGGCTCCGTGCTAGGAGTGACGGTGCCAACACTGCATATGAGCATGTTATTCAGCACGTCGTGCTGGCACCGTGACCCTCACGGGCTACCCTGGACAGAGTACATGCACAGCGGCGCCGAGAAAATCTGGTGA
- Protein Sequence
- MMADGIRKTNNLQIFQDDEGLLKVRTKLVLCDEPADFICPLFLPGKHLIIKRLVASKHQLLHHVGPGTLMTVLREKYSITGIRRLLSSTVSKCISCKRQSVKHADTPLAPLSLDRVKPAAGFEVTGSNCPSSPCSTLVLAPSPNISVDFDAESASGQDWCIPDGIFKTETPETTPGNTPVPWGQIQDPINEENDNEDSQKRDSEPKLGAQKNMEELVVSNIETQTPQKELALVCALENRVNETVAEKATPEPTEKNSIKESARELQPPNPDVYDFDAELEASRPPSSLRRRGQSTPVPAPPAPRPPSSESVEYVDILPTSSHCIQIKPSKQQQSGAECLSVSLVPKEEISLKKKKNMIENLSNSPALLDKLFNCLTAEQQTELDNFITAEGLNDQPSTSSTYLDQQAGSVFEAPTFYPTAEEFADPIKYYDKIAPQASRYGLCKIVPPEDFKPPCIMNDTIRFAVIYQYISKMYSRWGPVSRELAAIKAHLRTQSVVFDRAPLLDGSEVNLPKLYHAVERNGGLSNVIQRKRWGRVADEMKLSKLQHPERKLDPIYMRFLLPYATLSDQERQNIMANVEKCWTTKYQHMLERARNPFQRQNRMLGAEESESDDEGEDGHTAGALHEAEDCIVQGRVMNLVTFKKIATTLMDAHFEPNKQPPSAIEVEKAYWRAVLLGTEHIVANTASIDTGEEGYGFPKDPEAEYGTHPWNLKVLARNPHNVLRYLGSVLGVTVPTLHMSMLFSTSCWHRDPHGLPWTEYMHSGAEKIW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -