Ebru041205.1
Basic Information
- Insect
- Epinotia brunnichana
- Gene Symbol
- Jarid2
- Assembly
- GCA_963854355.1
- Location
- OY977948.1:11072887-11077383[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.4e-18 2.5e-14 55.4 0.0 6 88 66 145 62 146 0.90 2 3 6.1 4.6e+04 -3.1 0.0 8 19 159 170 152 188 0.53 3 3 5.8 4.3e+04 -3.0 0.0 26 40 214 228 202 241 0.69
Sequence Information
- Coding Sequence
- ATGTCGTATTTGTTCCAGGACCCAATCaaatattatgataaaatcGCCCCTCAAGCTTCAAGATACGGACTGTGTAAGATAGTCCCCCCAGAAGACTTCAAGCCGCCTTGTATAATGAACGACACGATCCGGTTCGCCGTAATATATCAATACATCTCCAAGATGTACAGCCGGTGGGGACCAGTATCTAGGGAGCTGGCGGCAATCAAGGCGCACCTACGAACGCAGAGCGTCGTGTTCGATCGGGCCCCACTCTTAGACGGCAGCGAAGTTAACCTGCCGAAGCTGTACCACGCGGTCGAGCGCAACGGGGGGTTAAGCAATGTCATCCAACGCAAGCGCTGGGGCCGGGTCGCTGATGAAATGAAGCTGAGCAAGCTACAGCACCCGGAGAGGAAGCTCGACCCTATTTACATGCGGTTCCTGTTGCCGTACGCCACGCTCTCCGACCAGGAGCGTCAGAACATAATGGCAGATGTAGAAAAATGTTGGACGACGAAATACCAGCATATGCTGGAGCGAGCCCGCAACCCGTTTCAGCGTCAAAATAGAATGTTGGGCGCCGAGGAGTCAGAGTCCGATGACGAGGGCGAGGACGGTCACACGGCGGGAGCATTACACGAGGCCGAGGACTGCATCGTGCAGGGCCGAGTAATGAACCTCGTCACCTTTAAAAAGGTAATATATTACTGTAAACTTAGCAGCTCCAACACTCAATGGCCGAAGTAG
- Protein Sequence
- MSYLFQDPIKYYDKIAPQASRYGLCKIVPPEDFKPPCIMNDTIRFAVIYQYISKMYSRWGPVSRELAAIKAHLRTQSVVFDRAPLLDGSEVNLPKLYHAVERNGGLSNVIQRKRWGRVADEMKLSKLQHPERKLDPIYMRFLLPYATLSDQERQNIMADVEKCWTTKYQHMLERARNPFQRQNRMLGAEESESDDEGEDGHTAGALHEAEDCIVQGRVMNLVTFKKVIYYCKLSSSNTQWPK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00656926;
- 90% Identity
- iTF_00656926;
- 80% Identity
- iTF_00656926;