Basic Information

Gene Symbol
pol
Assembly
GCA_963854355.1
Location
OY977958.1:9720034-9726391[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.2 3.7e+03 0.0 0.6 25 41 668 684 666 694 0.71
2 3 7.1e-09 2.1e-05 26.4 7.9 6 48 765 807 762 820 0.90
3 3 7.1e-09 2.1e-05 26.4 14.2 4 59 868 923 865 924 0.89

Sequence Information

Coding Sequence
ATGTCTCACATCGGGAATCTTAATGTTTTCGACCATAATACGCAAGAGTGGCAAATTTTTTACGGAAGATTGGAGCAGTTTATTAAGCTTAATGCAGTGGCGGACGAGAAAACGGGACCATTGTTACTCACCCACCTATCGGATGATACCTACCGGTTGGCAAGAAATCTTGTGCATTCAAAGAAATTGGAGAACGTCCAGTTCATTGAATTAGTCGATGAACTAGATAAGCATTTCTCTCCGCGGCGGTGCACTTTTGCCGACAGGGAGAAGTTTTTCGAGGCGAGGAGGGCTGCGGGAGAAAGCATCGAGGGATGGGCGGTGCGCGTTCGTGGGCTCGCAGTGTACTGTGATTTTGGCAGTGCATTAGACATGCTCCTAGTTAACCGTTTTGTGCTGGGCATGAACGTGGGTCCCGAACGTGACCGTTTGTTCGAGCAGGATGCTACCTCACTCTCATTCGCGAAggcagtggacgtggcgcagcaggcggcgagcgcgcgccaGGCTCGAGCCGCAGCAGCGGTGCCGGCGCATATCAAGGAGGAGCCGGTGTACCGGGTGGGCGCGCCCAGGCCCGGCGCCAGCGCCGCCCGCTGCCACGACACGCGCAAACCGTGCGCTGTGTGTGGTATGAAAAGCCACGACGCTGACCAGTGCCGGTACAGAAACTATCGGTGCCAAGCATGTGGCGTGAAAGGCCATTTAAAGAAAGTGTGCAGTGATAAAAGCAGTTACGTTATAGATAAGAGCGGACTAAGGCCATGTTCAAAGAAAGTTGAAGCGATAGTAAATGCACCTCGCCCCACAAATATAACGGAAGTAAAAAGATTTCTGGGCGTCGTCAATTACTACCGTAAATTTGTTCCAAACGCGTCATCACACTTAAATCCCTTGCATGAATTATTACGAGACGGAGCGCAGTGGGAGTGGAACGAAAGGCATGAGTGCGCATTTGAAACGGTGAAAAGCGAGCTCGCGTCAGATAAGGTACTGGCGCATTTTGACCCCGAGGCCCAGCTCGTGCTGACAGTGGACGCCGGACCGGCGGGGCTGGGTGGCGTGCTGGCGCTGCGCGCACCGGACGGCACCGAGCGCCCGCTGGCATTTGCTTCGCGTGCCCTATCGAAAAGCCAACGTAACTATAGTCAAGTTCAAAAAGAGGCGAGTGCAATCGTTTTTGGAGTCAGACATTTCCACCAGTATTTGTATGGACGTCAAGTACCTTTCATATTAAAGACTGACCATAGACCGCTATTATCTATATTTGGCAAGAAAAACGGGGTATCAATAATGGCCGCATCGCGCTTGCAAAGATATGCCTTATTTTTGTCGGCGTACAACTATTCAATAGAATATATAAGCAGTGAAAAAAACGTCGTAGCAGATTATTTCTCGCGCGCAATAACAAGTTGTGATGACTCACAACAAAACAGCGATAGCGGTCCGGCGGGGTGGGGAGCCGCTGTCGATGAATTATCACTATCGCATCTAAGGCGCCATGTAGATCAATTGCGAAAATACACTGGCATCATACCAGAGGACTATATACATGTTAAGGAATACAATTCGTGTAAATCGGGCGAGGTATGTGAACCGTTGCAGCCGCCGTCGCCCGCGCCGTCCGCGCtagccgcgcccgcgccggccacGCCGGCCTCGGCGATTTCGCCCCACTTGCACTCCGTGCCACCCTCTCCTTCCGCGCGTCTAGTGGCACCCGACACAATTATAGGCATTGAGAATGACGAGGAAGGGGAAAGGGCGGGAATGGAGGGCGAGTGGTTCGAGGCCCAAGACTCGACGCTGACTGACCCGGAGGAGTTTCGTTGTGACGATATTCCCTGTTCGGTTTCGGCGCAGCCGCCCCGCTCAAATGACGATGATGCCGAACCCGGCAACGAAAGATCGCCCGGAGTCGGAAGGGTATTCAAAACTGACACTCTACCCACACCACAGTCGCCACCCGGGTGGGACAGTTTGAGCACCCCCGAGGTGCTCGCCTACATCGAGCAGCTGGAGCAGGAGAAACACGCATTGGCCTCTTTGAAATCGAGGCAAGCTCTGGCACAGACACAGGAGATCGTGTCTCCGCTGgcggcggcgcccgcgccgctggAGTACTCTCCCATCACGCCGAAGAGCGAGGCCGCCGACATGATAAAGGCGCTCGAGGGCTCGCAGCAGCTTACGAGGGCCCGCAGGTGGCGCCCCCCCAAGCGAAGAGACAGCGTCGTCTCCTCCTTGTGCAGCGAGAACTCCTCGCTGTCCACGCAGGACATGAAGTCCATCAGGGACCGGAGGGACAAGAACAACGAGGCGGCGAAGCGATCCAGAATGCACAGGAAACTGAAGGAGATCCAGATGGAGCTGGAGGCGGACGAGCTCGAGGAGAAGAACAAGAAGCTTCGCGTGCAGGCAGGCTTTCTGGAGGTGATGGCCAAGAGGCTGAAGGACGCTCACCTCCATCATGCAGAAATAAACGCGCTCGAGGGCTCGCAGCAGCTCACGAGGGCCCGCAGGTGGCGCCCCCCCAAGCGAAGAGACAGCGTCGTCTCCTCCTTGTGCAACGAGAATTCCTCGCTGTCCGCGCAGGACATGAAGTCCAGGGACCAGAGGGACAAGAACAAAGAGTCGGCGAAGCGATCCAGAATGCACATGAAAATGAAGGAGCTCCGGTTGGAGCAGGAGGTGGACGAGCTCGAGGCACAGAATAAGAAGCTTCGCGTACAGGCACGCATCCTGGAGGAGATGGCCAAGAAGCTgaagaaatga
Protein Sequence
MSHIGNLNVFDHNTQEWQIFYGRLEQFIKLNAVADEKTGPLLLTHLSDDTYRLARNLVHSKKLENVQFIELVDELDKHFSPRRCTFADREKFFEARRAAGESIEGWAVRVRGLAVYCDFGSALDMLLVNRFVLGMNVGPERDRLFEQDATSLSFAKAVDVAQQAASARQARAAAAVPAHIKEEPVYRVGAPRPGASAARCHDTRKPCAVCGMKSHDADQCRYRNYRCQACGVKGHLKKVCSDKSSYVIDKSGLRPCSKKVEAIVNAPRPTNITEVKRFLGVVNYYRKFVPNASSHLNPLHELLRDGAQWEWNERHECAFETVKSELASDKVLAHFDPEAQLVLTVDAGPAGLGGVLALRAPDGTERPLAFASRALSKSQRNYSQVQKEASAIVFGVRHFHQYLYGRQVPFILKTDHRPLLSIFGKKNGVSIMAASRLQRYALFLSAYNYSIEYISSEKNVVADYFSRAITSCDDSQQNSDSGPAGWGAAVDELSLSHLRRHVDQLRKYTGIIPEDYIHVKEYNSCKSGEVCEPLQPPSPAPSALAAPAPATPASAISPHLHSVPPSPSARLVAPDTIIGIENDEEGERAGMEGEWFEAQDSTLTDPEEFRCDDIPCSVSAQPPRSNDDDAEPGNERSPGVGRVFKTDTLPTPQSPPGWDSLSTPEVLAYIEQLEQEKHALASLKSRQALAQTQEIVSPLAAAPAPLEYSPITPKSEAADMIKALEGSQQLTRARRWRPPKRRDSVVSSLCSENSSLSTQDMKSIRDRRDKNNEAAKRSRMHRKLKEIQMELEADELEEKNKKLRVQAGFLEVMAKRLKDAHLHHAEINALEGSQQLTRARRWRPPKRRDSVVSSLCNENSSLSAQDMKSRDQRDKNKESAKRSRMHMKMKELRLEQEVDELEAQNKKLRVQARILEEMAKKLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-