Ebil031613.1
Basic Information
- Insect
- Epinotia bilunana
- Gene Symbol
- -
- Assembly
- GCA_947049265.1
- Location
- CAMRIQ010000430.1:226261-268611[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 0.04 3.3 9.5 0.3 1 23 800 822 800 822 0.95 2 21 0.00019 0.015 16.8 3.1 1 23 833 855 833 855 0.97 3 21 0.011 0.86 11.3 9.3 1 23 861 883 861 883 0.99 4 21 6.7 5.5e+02 2.5 8.5 4 23 892 911 891 911 0.96 5 21 6.7 5.5e+02 2.5 8.5 4 23 920 939 919 939 0.96 6 21 6.7 5.5e+02 2.5 8.5 4 23 948 967 947 967 0.96 7 21 6.7 5.5e+02 2.5 8.5 4 23 976 995 975 995 0.96 8 21 6.7 5.5e+02 2.5 8.5 4 23 1004 1023 1003 1023 0.96 9 21 6.7 5.5e+02 2.5 8.5 4 23 1032 1051 1031 1051 0.96 10 21 6.7 5.5e+02 2.5 8.5 4 23 1060 1079 1059 1079 0.96 11 21 6.7 5.5e+02 2.5 8.5 4 23 1088 1107 1087 1107 0.96 12 21 6.7 5.5e+02 2.5 8.5 4 23 1116 1135 1115 1135 0.96 13 21 6.7 5.5e+02 2.5 8.5 4 23 1144 1163 1143 1163 0.96 14 21 6.1e-05 0.0049 18.3 6.6 1 23 1170 1192 1170 1192 0.99 15 21 2.1e-05 0.0017 19.8 0.2 1 23 1198 1220 1198 1220 0.93 16 21 7.3e-06 0.0006 21.2 0.1 1 23 1226 1248 1226 1248 0.98 17 21 2.8e-05 0.0023 19.4 1.2 1 23 1254 1277 1254 1277 0.95 18 21 0.00015 0.012 17.1 1.8 1 23 1283 1306 1283 1306 0.96 19 21 6.7e-05 0.0055 18.2 1.1 2 23 1313 1334 1312 1334 0.97 20 21 4.9e-05 0.004 18.6 1.0 1 23 1340 1362 1340 1362 0.97 21 21 0.0073 0.59 11.8 0.2 1 23 1368 1392 1368 1392 0.94
Sequence Information
- Coding Sequence
- ATGTCAGACAAAAGTAACTTGGGGTTACAGCCACCTAAGGGCTTTAAAATAGAAGACGCAGAGGCGTGGAGAAAGTATAAGCAACTATTCAATTTGTACGTACAGGCGACGGATCTAGAAAAAGAAAAGGATGAGAAAAAGGTGGCCATTTTCTTAACGTGCGCGGGAGAAGAGATTTTAGACATTTATAATGGAATGAACGACAGTTCTACGTTAAAATGGTCAGAGTTGTTGCAGAAGATTGATGGTCATTTTAGTAACCAAACAAACACGGTAGTAAATAGTTACCGATTTTACAGTATAAAACAGGAACAGGATGAACCAGTAGAAAGGTTCGTATTGAGATTGAAAAATGCAGCTAAAATGTGCAGTTTTAAGGAAGAAGACCGGATGGTACGAGACATGCTGGTAATTGGGTTGAGAGACGGAGGCATAAAAGAGAGGTTGTTAAGAGAACGTGATTTGACCTTAGACATAGCAGTGGACTTATGCAGAGCAGCTGAGTATAGTAAGAAAAATATGAGGGAGTTGGAAGAAAAAATACAGTCGGTGGATCTTGTCAAGGAAAGTCCGCGTTACAGAAAAGAAAATACGAGTTACAGTTGCAATAAATGTGGAAAACAGCATGATCCAAGAAGATGCCCAGCTTATGGAAGAAGATGTGCAGTATGCAACGTTTATAATCATTTCGCAGTTATGTGTAGGCACAAAAAGAAAGAAGAGAGACCACATCAGCAGCAAAGATATAGTAAAAAAGTGGATGCCATGAAGGAGTGTACAAAGGACAGTGACAGTTCAGAAGAATTTGTGGTGGACTCCGTAAGTAGTTGCAATAGATTACAATGGTATCAAGTAATAAATGTTGAAGGGGTGGAAATCAATTTCAAACTAGATTCAGGTGCTGACTGTAATACATTACCACTTAACCTATTTGATAAGCTCAGAGATAATATGCTGGACTACTCTGAATTGAACCAAACCAGGGATAGAATAGGGAATTATTTAAGGCAGGATGCACCGGTATATCTAGCACCAAGTTCTCCTGCACCTGTAGCTAACCCAGAGCCAGTTGATGCACCCATGGTGACCAGGACAGGGAGGATGGCGTCGCGGGTGGCGAGCTGCTTCATATGCAGCACCAGCACCGGCGCCACCAACACCATCAGTCTCATACAAGACACGAGTAATCTTCAATCTGGCAAGAAACTGCTGGACATCGTGAGCGAGATAGCTGAGAAGCCCTTGAAGGAGGAAGACATACATTCTACAGTCATATGCAAGAAATGCAGTCAAACATGCAAGGAATATGATGACCTACAAGTCAGGTTGAAGCACATAAAGACGGAGCTCCACGGGCAGATCCACAAGAGCAGCGAGAGCCCCACGAAGGCCGAGGCCCGGAAGGTGGTGCTGCCGGCCTCCAAGCTGCACCCGCTGCCGCCGGACTTCGTGCTCAACGTCGGCCGCCTCGCCGGCGTGCCGCAGAAGATATCCACAGCCGTCCCATCAAAGCTGAGTCTCAAGGTCACCGTCGGCTCCTCCGTCCTCACCCAAAGCATCAAAACGACCCCAGCGCTCGCCAAGAACATCGCCACGCAGAAGGCGGAGCTCACGAGCAGTGGGAACGACTTGATCTTCGAAGGGGGCAGTTTACCGAAGGACTTCATGGGTTCGATGGTGCTGCAGAGGATAGGTCAGGAGGGTGACGTGAACAATGATGACCAGCCTATGGAGATTGATGAAGACTGCTCGTACTCAATAGTTACTCAAGAGGATGGCACAAGTGAAGTAACCAAGaagAAATCCGGCGACCAGTCGAGCGTGTTCGACGTGAGTCTCCTGTCGTCGCTGGACGACAGCGGGGACGCCGACCAGCACGCCGACCAGCACACCGACCAGTATATCGTCGGGAAACTAGAGATACTGAGCGAGAGGGAAGACGAGGAGGAACAGACAATAGTGATGTCGAGCGATAACTCGATCCTGCGAGTGGTGTCCGGACAGAAATTGGTCTATGGAGAGTCGCTGGAGCTGCTCAATGAGGACGCGGACACACAGCTGGACAGCCAAGACGACGAGGACTCACAAATCGAGCTGCAAGTGTCTGGAGACGAGGAGACGGCCAACGCCATCATCGCCGCGGCGAGGGAGCAAGGTGGTGCATTCATAAAGGTGCAGTCCGGAGAGATGTATCGCGTCAAGTCGGTGCAGAGCAAACCCAAGGAAGACGGCGACCAAGAGTTCGCCGATCACTTGCAGATTGTGGTGAAAGAAAATGGTTTATTCAAATGTGTGCTGtgtaaaaagaataaaaataaagGCGAACGCACCGGGCGTTTCACGGGCGACGCGGAGTTCATTATGCGGCACATGCGCAGTCTGCACGACGCGAGAGTCTACATCTGCCGCGCCTGCGGCCTGGTGCTGAAGAGGCGCGACCACTACATCGCTCATTTAGCGCAACACAACAAAGAGAGTCAGGACAAGAGCAAATTGCACGTGTGCGACAtctgtcataaaaaatatagTTCTAAAACCCTATTGGTGGAGCACATGAACCTGCACAACGGCCAGCGACCGTACACCTGCCACATTTGCCACAAGAGCTTCGCCTCCAAATACACGCACCAGTCGCATCTCAAGACACATCTCGTGAGTTCTTACAATCATCATCACATTTGCCACAAGAGCTTCGCCTCCAAATACACGCACCAGTCGCATCTCAAGACACATCTCGTGAGTTCTTACAATCATCATCACATTTGCCACAAGAGCTTCGCCTCCAAATACACGCACCAGTCGCATCTCAAGACACATCTCGTGAGTTCTTACAATCATCATCACATTTGCCACAAGAGCTTCGCCTCCAAATACACGCACCAGTCGCACCTCAAGACACATCTCGTGAGTTCTTACAATCATCATCACATTTGCCACAAGAGCTTCGCCTCCAAATACACGCACCAGTCGCACCTCAAGACACATCTCGTGAGTTCTTACAATCATCATCACATTTGCCACAAGAGCTTCGCCTCCAAATACACGCACCAGTCGCATCTCAAGACACATCTCGTGAGTTCTTACAATCATCATCACATTTGCCACAAGAGCTTCGCCTCCAAATACACGCACCAGTCGCATCTCAAGACACATCTCGTGAGTTCTTACAATCATCATCACATTTGCCACAAGAGCTTCGCCTCCAAATACACGCACCAGTCGCATCTCAAGACACATCTCGTGAGTTCTTACAATCATCATCACATTTGCCACAAGAGCTTCGCCTCCAAATACACGCACCAGTCGCATCTCAAGACACATCTCGTGAGTTCTTACAATCATCATCACATTTGCCACAAGAGCTTCGCCTCCAAATACACGCACCAGTCGCATCTCAAGACACATCTCGTGAGTTCTTACAATCATCATCACATTTGCCACAAGAGCTTCGCCTCCAAATACACGCACCAGTCGCACCTCAAGACACATCTCGACCGTCCCCGGCCGTTCAAGTGCGCGGACTGCGGCAAGTGCTTCTTCACGCTGCAGAACCTGAACCAACACCACAAGACGCACTCGGGCCTCAAGGAGTTCGAGTGCAACATATGCGgCAAAGCGTTCGGCACCCAGCACAACCTGGAGATGCACGGCGTGGTGCACTCGGGGCAGAAGCCCTTCGTGTGCGGGCTCTGCGGGAAGGCCttcgcgcgccgcgccgaggTCAAGGACCACATGCGGATACACACCGGCGAGCGTCCCTTCGCCTGCGACGTGTGCGGCGCGACCTTCTCCCAGCGCTCCAACCTGCACTCGCACAAGCGCGCCACCCACTACGACGACAAGCGGTACAAGTGCGACCAGTGCCCCAAGCGGTTCAAGAGACGCAGATTACTGGACTACCACATAAAGGCGTCACACACGGGCGAGCGCCCACTGAAGTGCGAGGTGTGCAAAGCCACGTTCGTGTACCCCGAGCACTACAAGAAACACATCAGGATACACAGCGGGGAAAAACCATACGTGTGTGAGGTGTGCGGCAAATCGTTCAACTCCCGCGACAACCGAAACACTCACCGTTTCGTGCACAGCGACAAGAAACCTTACGAGTGTCTCGTGTGCGGCGCCGGGTACATGAGGAAACGGCTGCTGTACTCACACATGAACACACAGGGACATTTAGCGGAGTCGATAGTGGTGAACCAGCCGCGAGTCACCATAGAACGGGTTGCTGACAACGCGCCGGGAGACAATGTTTACGAATCCACAGAGGAGTTGGAATTAGAATCACAAGGAAAATCTACTGAAGGCCAAGGCGCGGTGTATATCGGCGACAAGAAATACATCCTTCAGGAGGGGAAGACTTCACTCAACCTCGTGCAAGATACGGAGGACATACTGACTTATAATCTGGAAGGATCCCTAAAGACTGAATCGAACTTCCTAGAGACGGTCACCGCTGAACAGTTAGGAGAGGAATCACAGATGGTCGACGAGAGCGGAGGCATCGTCCGCGTCGTGCAGATCACGCTACCGGACGGCAACAGTGGCTGGGTCGCCATCAACCCTTAA
- Protein Sequence
- MSDKSNLGLQPPKGFKIEDAEAWRKYKQLFNLYVQATDLEKEKDEKKVAIFLTCAGEEILDIYNGMNDSSTLKWSELLQKIDGHFSNQTNTVVNSYRFYSIKQEQDEPVERFVLRLKNAAKMCSFKEEDRMVRDMLVIGLRDGGIKERLLRERDLTLDIAVDLCRAAEYSKKNMRELEEKIQSVDLVKESPRYRKENTSYSCNKCGKQHDPRRCPAYGRRCAVCNVYNHFAVMCRHKKKEERPHQQQRYSKKVDAMKECTKDSDSSEEFVVDSVSSCNRLQWYQVINVEGVEINFKLDSGADCNTLPLNLFDKLRDNMLDYSELNQTRDRIGNYLRQDAPVYLAPSSPAPVANPEPVDAPMVTRTGRMASRVASCFICSTSTGATNTISLIQDTSNLQSGKKLLDIVSEIAEKPLKEEDIHSTVICKKCSQTCKEYDDLQVRLKHIKTELHGQIHKSSESPTKAEARKVVLPASKLHPLPPDFVLNVGRLAGVPQKISTAVPSKLSLKVTVGSSVLTQSIKTTPALAKNIATQKAELTSSGNDLIFEGGSLPKDFMGSMVLQRIGQEGDVNNDDQPMEIDEDCSYSIVTQEDGTSEVTKKKSGDQSSVFDVSLLSSLDDSGDADQHADQHTDQYIVGKLEILSEREDEEEQTIVMSSDNSILRVVSGQKLVYGESLELLNEDADTQLDSQDDEDSQIELQVSGDEETANAIIAAAREQGGAFIKVQSGEMYRVKSVQSKPKEDGDQEFADHLQIVVKENGLFKCVLCKKNKNKGERTGRFTGDAEFIMRHMRSLHDARVYICRACGLVLKRRDHYIAHLAQHNKESQDKSKLHVCDICHKKYSSKTLLVEHMNLHNGQRPYTCHICHKSFASKYTHQSHLKTHLVSSYNHHHICHKSFASKYTHQSHLKTHLVSSYNHHHICHKSFASKYTHQSHLKTHLVSSYNHHHICHKSFASKYTHQSHLKTHLVSSYNHHHICHKSFASKYTHQSHLKTHLVSSYNHHHICHKSFASKYTHQSHLKTHLVSSYNHHHICHKSFASKYTHQSHLKTHLVSSYNHHHICHKSFASKYTHQSHLKTHLVSSYNHHHICHKSFASKYTHQSHLKTHLVSSYNHHHICHKSFASKYTHQSHLKTHLVSSYNHHHICHKSFASKYTHQSHLKTHLDRPRPFKCADCGKCFFTLQNLNQHHKTHSGLKEFECNICGKAFGTQHNLEMHGVVHSGQKPFVCGLCGKAFARRAEVKDHMRIHTGERPFACDVCGATFSQRSNLHSHKRATHYDDKRYKCDQCPKRFKRRRLLDYHIKASHTGERPLKCEVCKATFVYPEHYKKHIRIHSGEKPYVCEVCGKSFNSRDNRNTHRFVHSDKKPYECLVCGAGYMRKRLLYSHMNTQGHLAESIVVNQPRVTIERVADNAPGDNVYESTEELELESQGKSTEGQGAVYIGDKKYILQEGKTSLNLVQDTEDILTYNLEGSLKTESNFLETVTAEQLGEESQMVDESGGIVRVVQITLPDGNSGWVAINP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -