Basic Information

Insect: Epinotia bilunana
Gene Symbol: -
Assembly: GCA_947049265.1
Location: CAMRIQ010000350.1:259662-277709[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.046 3.7 9.3 4.3 1 23 102 125 102 125 0.94

2 14 0.0035 0.28 12.8 6.3 1 23 135 158 135 158 0.97

3 14 0.00044 0.035 15.7 0.0 2 23 209 231 208 231 0.92

4 14 0.0011 0.092 14.3 0.6 2 23 235 257 234 257 0.90

5 14 3.1 2.5e+02 3.5 1.7 2 23 261 282 260 282 0.92

6 14 0.015 1.2 10.8 0.2 2 23 288 310 287 310 0.96

7 14 0.075 6.1 8.6 3.8 2 23 317 338 316 338 0.96

8 14 0.00027 0.022 16.3 0.9 1 23 344 366 344 366 0.98

9 14 4.4e-05 0.0036 18.8 0.5 2 23 373 394 372 395 0.94

10 14 0.0046 0.37 12.4 1.3 2 23 472 494 471 494 0.95

11 14 0.05 4 9.2 0.6 3 23 526 547 525 547 0.96

12 14 7e-05 0.0057 18.2 0.5 2 23 554 575 553 575 0.96

13 14 0.00068 0.055 15.1 0.8 1 23 581 603 581 603 0.97

14 14 0.0091 0.74 11.5 0.5 2 23 610 631 609 632 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.046	3.7	9.3	4.3	1	23	102	125	102	125	0.94
2	14	0.0035	0.28	12.8	6.3	1	23	135	158	135	158	0.97
3	14	0.00044	0.035	15.7	0.0	2	23	209	231	208	231	0.92
4	14	0.0011	0.092	14.3	0.6	2	23	235	257	234	257	0.90
5	14	3.1	2.5e+02	3.5	1.7	2	23	261	282	260	282	0.92
6	14	0.015	1.2	10.8	0.2	2	23	288	310	287	310	0.96
7	14	0.075	6.1	8.6	3.8	2	23	317	338	316	338	0.96
8	14	0.00027	0.022	16.3	0.9	1	23	344	366	344	366	0.98
9	14	4.4e-05	0.0036	18.8	0.5	2	23	373	394	372	395	0.94
10	14	0.0046	0.37	12.4	1.3	2	23	472	494	471	494	0.95
11	14	0.05	4	9.2	0.6	3	23	526	547	525	547	0.96
12	14	7e-05	0.0057	18.2	0.5	2	23	554	575	553	575	0.96
13	14	0.00068	0.055	15.1	0.8	1	23	581	603	581	603	0.97
14	14	0.0091	0.74	11.5	0.5	2	23	610	631	609	632	0.93

Sequence Information

Coding Sequence: ATGAAAGCGTGCTTCCGCTGCAAGACGATTCGCAATATCCAGGACATCGGCGACACGGACAAGTGCCCGGACTGCGACCAGGCCCTCACTAAGTGCCTCACCAGCGACCAGCTAGCCGGGCGCCGGCTGCCCAGGCAAGCGAAGAAAACACAGAACAACGGCAAACAAACTAAAGCCGCTCGTCCAAAGAGAATTGTCCCGAACGTCACTGTGAAGAACGTCGACGACATTCGTGACGATGACGACGATGTAGCTGACGACACGGATGTCAGCATTGACGCCGCTGTCGCACAAGAAGGTGCGCACGAGTGCACCGTCTGTAAGAGAGTGTTTGACACGGAGAAAAAGCTTACGGGACATTTCCATCGGCTCCACGGGACCGCCCAGGAAGGGGATGACAAGCACGAGTGTACAGAGTGCAAGAGAGTGTACGCGAACAAGAAGCAATTGTCCAGCCACTTCAGGCGGTGCCATCGGCCCGCCGTAGAGAGAGACACGTGTTATAAGGATATCATCAAAGTAATACGAGGGGAAAAGAAGACATTCGCATGTCAGCTATGCGACTACCGATCGGATTGTCGGACCTCTATCAGCGGTCACGCCCGTGGCCACTTGAATGACATGACTTGTCCCATTTGTGACGAGATCTTCCCAGATCCGAAGCTGTTAGAAGCCCACAAAACACAACCACACTCAAAACTCTCTTGTCAACTTTGCAATCGAGTGTATTCCACCAAAATTGCCCTACAGAAGCACAAATACTACGCCCATCGCCCAATCAAATGCAGTTTGTGCCCAGAAAAAGTCACTAAGCAGCTAATGCACAGACATTTGAAGGGCTTCCACCAAAATGACATGTTGACTTGCGGAATCTGCGGCTATAGAAACACGCAGAAAGCTGGAATGAATCGCCATCAAAAAGTAGTTCATATGAAAGAGAAGCGTGTCACTTGCGACATTTGTAAATTCCAGTGCTTCAATAATATGAGGTTGAAACGACACATGATCAGACATAAAGCGGAGAAGATATACGAGTGCAGATTTTGTAAGAAGACATTCCCAAGGCCGGCGACAATGAAATTACATGAGAAGATTCACACGGGGCAAAAGGATAAAGTGTGTGCGGTGTGCGGAGCTGCGTTCGTGCAGAAAGCCAGCTTGAATTACCACATGAAAAAACATCACCCTGAACGCAGAAGCTATAAGGATTTCGTCAAAGTCGTACGAGAGAAGCCAAAGATATACGGGTGTGAATTGTGTGATTACCAATCGGAGTACCTTATTGGGTCCTACGCCCACGCACGACACCATGTCAGAAACATGTCTTGCCCGATATGTGCCGAGATAATCCTCGATCCAAAGCAGTTGGAAGCGCACAAATCACAGCCACATGCTCATCCCAACTCTAAGATCACGTGCCAAACTTGCAATGCTGAGTGCCCAAGCAGTGCTTCTCTAAAGAAGCACATCAAATACTCTCATCGACCGATCAAATGTTCCTATTGTTCAGAACTTGTCACCAGAAAGTCAAGGAACAAGCATTTGCTAGAATTCCACGATAAAGATTTGCCGTCTTGCGGCGAGTGCGGTTTTGTAGCTATACATCCACATTCAATTATTAGACATCAAAAATCAGTACACTTGAAAGTGAAGAATGTAGAATGCAGTatttgtaatttgaaattcTTCGATTGGTTTAATTTGAGGTCGCATATGGTCAAGCATAAGCCCAAGAAACTCTACGCGTGTGGGTTTTGTAAGAAGCAATTTGCGAGAAAGCGGACACTCGCATTACATGAGAAGATACATACGGGGAAGAAAGACAAAGTGTGTGAGGCGTGTGGCGTTGGCTTTGTGCAGAAGGCTAGCTTGAACTATCACAAGATAAAACACCACCCAGACCGTGTTTAG
Protein Sequence: MKACFRCKTIRNIQDIGDTDKCPDCDQALTKCLTSDQLAGRRLPRQAKKTQNNGKQTKAARPKRIVPNVTVKNVDDIRDDDDDVADDTDVSIDAAVAQEGAHECTVCKRVFDTEKKLTGHFHRLHGTAQEGDDKHECTECKRVYANKKQLSSHFRRCHRPAVERDTCYKDIIKVIRGEKKTFACQLCDYRSDCRTSISGHARGHLNDMTCPICDEIFPDPKLLEAHKTQPHSKLSCQLCNRVYSTKIALQKHKYYAHRPIKCSLCPEKVTKQLMHRHLKGFHQNDMLTCGICGYRNTQKAGMNRHQKVVHMKEKRVTCDICKFQCFNNMRLKRHMIRHKAEKIYECRFCKKTFPRPATMKLHEKIHTGQKDKVCAVCGAAFVQKASLNYHMKKHHPERRSYKDFVKVVREKPKIYGCELCDYQSEYLIGSYAHARHHVRNMSCPICAEIILDPKQLEAHKSQPHAHPNSKITCQTCNAECPSSASLKKHIKYSHRPIKCSYCSELVTRKSRNKHLLEFHDKDLPSCGECGFVAIHPHSIIRHQKSVHLKVKNVECSICNLKFFDWFNLRSHMVKHKPKKLYACGFCKKQFARKRTLALHEKIHTGKKDKVCEACGVGFVQKASLNYHKIKHHPDRV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -