Basic Information

Insect: Epinotia bilunana
Gene Symbol: -
Assembly: GCA_947049265.1
Location: CAMRIQ010000127.1:1629223-1632605[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.00021 0.017 16.7 6.4 1 23 162 184 162 184 0.96

2 7 5.2e-06 0.00042 21.7 0.9 1 23 190 212 190 212 0.97

3 7 0.00014 0.011 17.2 0.6 1 20 218 237 218 240 0.92

4 7 1.4e-05 0.0012 20.3 2.9 1 23 246 268 246 268 0.96

5 7 2.3e-05 0.0018 19.7 3.2 1 23 274 296 274 296 0.98

6 7 2.9e-06 0.00023 22.5 0.7 1 23 302 324 302 324 0.97

7 7 2.6e-06 0.00021 22.6 0.5 1 23 342 364 342 364 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.00021	0.017	16.7	6.4	1	23	162	184	162	184	0.96
2	7	5.2e-06	0.00042	21.7	0.9	1	23	190	212	190	212	0.97
3	7	0.00014	0.011	17.2	0.6	1	20	218	237	218	240	0.92
4	7	1.4e-05	0.0012	20.3	2.9	1	23	246	268	246	268	0.96
5	7	2.3e-05	0.0018	19.7	3.2	1	23	274	296	274	296	0.98
6	7	2.9e-06	0.00023	22.5	0.7	1	23	302	324	302	324	0.97
7	7	2.6e-06	0.00021	22.6	0.5	1	23	342	364	342	364	0.97

Sequence Information

Coding Sequence: ATGACCGAAGCCCTACGCTCCGCAGTGTACGCCGAACATGATATAAAGCAAGAACAAGTGGCCATCGCTGAGGTACCTCAAGGTCCCATTCCTCTGGCTACAGTGCAAGCCATCTACCCAATAAAATATGAGCCAGAGGATATTGTTGAGACACTAGAAATGTCCGAGCCTTGGACCACAGTGTACAAACATGAAATAAAACTAGAGTCAGTCACTTCTGAGACACCTCAATCACCCGCTCAAGCTGCAGTGAACTGTGAAATCAAGCAAGAAGCAGCTATTAATCCCGAAGTGTTTAAAAAGCCTGTCAAGGCTGTTCCGCAGACCACTGTGTTTGTAGAACAAGGAATGAAACGAGAGCCGGTGGTTAATGCAGAAGTGCACCGGTCTGTCAAGTGTCTGAATAATGATGCACCATCAACAAGTTCCCGTGTCTCACCTCCCCGCACCCCTAAGCGTAAAGGCTCCAAGAGCAGAAAACTCCACTCCTGCCATATATGCCAAAAACAGTTCACACACTTAAGCAACGTTCAGAAACACCAAGTTATCCACACGGGACAAAAGCCATATTCCTGCAACATATGCAACAAGAATTTCACGCAATTGATAAATCTAAAGACTCACAAAGCTATTCACACAGGAATTAAACCATACACCTGCAAAACATGCGAAAGAGAGTTCTCGCAACTGGCTAATTTGAGGTCACACGAGCCCACACACACCGGGATTAAGGCACACTCCTGTGACGTGTGTGAAAAAAAATTCACGCGATCAGACAGCTTGAAAACACATAAACTGATCCACACTGGACAAAAGCCATTCTGTTGCGAAGTATGTACGAAGGAGTTTATAAAATCCAGCGACTTGAGGATTCATAAGCGGACTCATACGGGGCAGCAGCCGTATGCGTGCAATGTGTGTGAGCTGCGGTTCACGCAGAAAGGTAATCTGACTAGGCATAAAGCGACCCATGCGTGGAATTGGGATACTGAATCCACAGAGATAGTTGGCAAAGGACGGCCGTATGCGTGCGACGAGTGCGAGCTCCGGTTCACACAGAAAGGTAATCTGACCAGGCATAAAGCGACACACGCGAGGAATTTGGCGAAAACTGAACACAGAGAGGTGATGATAGTCTGGAGAAACTGA
Protein Sequence: MTEALRSAVYAEHDIKQEQVAIAEVPQGPIPLATVQAIYPIKYEPEDIVETLEMSEPWTTVYKHEIKLESVTSETPQSPAQAAVNCEIKQEAAINPEVFKKPVKAVPQTTVFVEQGMKREPVVNAEVHRSVKCLNNDAPSTSSRVSPPRTPKRKGSKSRKLHSCHICQKQFTHLSNVQKHQVIHTGQKPYSCNICNKNFTQLINLKTHKAIHTGIKPYTCKTCEREFSQLANLRSHEPTHTGIKAHSCDVCEKKFTRSDSLKTHKLIHTGQKPFCCEVCTKEFIKSSDLRIHKRTHTGQQPYACNVCELRFTQKGNLTRHKATHAWNWDTESTEIVGKGRPYACDECELRFTQKGNLTRHKATHARNLAKTEHREVMIVWRN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -