Basic Information

Gene Symbol
ZFY
Assembly
GCA_947049265.1
Location
CAMRIQ010000350.1:326242-329283[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 1.2 96 4.9 1.2 1 23 112 135 112 135 0.95
2 11 0.0013 0.11 14.1 2.1 2 23 171 193 171 193 0.94
3 11 0.00056 0.046 15.3 2.2 3 23 203 223 201 223 0.94
4 11 3.2e-05 0.0026 19.2 5.2 1 23 229 251 229 251 0.99
5 11 7.5e-06 0.00061 21.2 0.6 1 23 257 279 257 279 0.97
6 11 2.1e-05 0.0017 19.8 0.5 2 23 286 307 285 307 0.97
7 11 0.00052 0.042 15.4 0.4 1 23 345 368 345 368 0.95
8 11 0.00082 0.067 14.8 2.4 2 23 404 426 404 426 0.94
9 11 7.4e-05 0.006 18.1 2.4 1 23 432 454 432 454 0.96
10 11 7.3e-07 6e-05 24.4 1.7 1 23 460 482 460 482 0.99
11 11 2.6e-05 0.0021 19.5 0.5 1 23 488 511 488 511 0.97

Sequence Information

Coding Sequence
ATGATCAGTCAAGATGGCAAGAAAATAAAAGAATTGGACACAATCCGCAAAGTGATGATCAGCCAGAAAGACAAGAagacaaatgaaataaaacaattaactCCGTTCCGCAGAGTGACGATCAGCCAGGAAGGCCAgaaaacaagtgaaataaaacaattaactCCGTTCCGCAGAGTGGCGATCAGTCAGGAAGGCatgaaaacaaacgaaataaaagtATTAGCCCAGTTCCGCAAATTGATGATCAATCAGGAAGGCAACCAAACAAACGCAATAAGAAACATAGCTCCATTCTGCAAAGTGATGATCAGTATAGATAGCAAGAAAACTTACGCTTGCAGGTTGTGCACACGGGAATTTGAGATGCGAAAACGCTGGACGGAGCACTTCAAACGCGCTCACTTAAAGATAAAAAGGGATACGCATGGTTGCGTCATTTGCAAAGAACAGTTGGTACCCAGACAACGGTGGAAGCATATGGAGGAGCGTCATGGGTGGCCTGCCCCGACTTGTGACGAATGTGGCAGGAAATTCTCCTATCCCTTCCAAGTGCACAAGCACAAGAAAGAAGTTCACATGCGATTAGATAACCTCGAACACCTATGTGATCAATGTGGAGCAAAGTTCTCCAACAAAACAAGTCTGCAGCAGCACTCTATCAAGCATTCGGAAGTGAGGAACTACAAATGCGAACACTGCTTTAAAGCATTCAAAACTGTCACATATTTGAGACAACACTTGAAAACTCATTCGCTCGTTAAAGAATACGTCTGCCCTGTCTGCACCAAGGCTTTTGTTAACTACAAGAATCTAAAGCAACACGCTACTAAGCATATAGTTGAGAAAAACGTCAAATGCGAAGTTTGTTCCAAAGGATTCAAAAATGCTAGGAGTTTGAGGTTGCATTTAAAGATTCATAGCGAAGATAAAAGACACGTGTGTCCAGTTTGGAAACCCCCAGGATCAAAGCCAAAAAGAGATGTGGCAGAATTCTGCGATGTAAAGGACAAGGATGACGGAACAAAATCATACGCTTGCAATATATGCGACCACGAATTCAAGCAATGGGGCCTCTGGCTGCAGCACTACAACCAGGTCCATCTGAAGCTAAGAAAGAAGACGCATCCCTGTGTCATTTGTCACGAGCAACTCGTTCCGAGACATAGATGGAGACATATGGAGGAGAAGCACGGTTGGGCAGCCCCCACGTGTGGCGCTTGCGGAAAAAAGTTCTCCTACCCCCACCAAGTAACTAAACACCAGAAGCAATTCCATATGGGGGAGAGGAACCATACGTGCGAGCAGTGCGGACAATCGTTCTCCGATATCAAGAACTTGAAACAGCACGCTTTCAAGCATTCTGACGCGAGGGATTATAAGTGCGAATACTGCTCGAAAGCTTTCAAAACGGCCAAGTATTTGAAGTTGCATATAAAGATACATTTGAATGATAAGAGATATGTGTGTACGGTGTGTCAGGAGGCGTTTGTGCAATCGGCCAGTCTGAAGTATCACATGACTAAGCGGCACCCTGACGTAGTGTAG
Protein Sequence
MISQDGKKIKELDTIRKVMISQKDKKTNEIKQLTPFRRVTISQEGQKTSEIKQLTPFRRVAISQEGMKTNEIKVLAQFRKLMINQEGNQTNAIRNIAPFCKVMISIDSKKTYACRLCTREFEMRKRWTEHFKRAHLKIKRDTHGCVICKEQLVPRQRWKHMEERHGWPAPTCDECGRKFSYPFQVHKHKKEVHMRLDNLEHLCDQCGAKFSNKTSLQQHSIKHSEVRNYKCEHCFKAFKTVTYLRQHLKTHSLVKEYVCPVCTKAFVNYKNLKQHATKHIVEKNVKCEVCSKGFKNARSLRLHLKIHSEDKRHVCPVWKPPGSKPKRDVAEFCDVKDKDDGTKSYACNICDHEFKQWGLWLQHYNQVHLKLRKKTHPCVICHEQLVPRHRWRHMEEKHGWAAPTCGACGKKFSYPHQVTKHQKQFHMGERNHTCEQCGQSFSDIKNLKQHAFKHSDARDYKCEYCSKAFKTAKYLKLHIKIHLNDKRYVCTVCQEAFVQSASLKYHMTKRHPDVV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00660606;
90% Identity
-
80% Identity
-