Ebil031072.2
Basic Information
- Insect
- Epinotia bilunana
- Gene Symbol
- -
- Assembly
- GCA_947049265.1
- Location
- CAMRIQ010000415.1:1079082-1099941[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.0012 0.094 14.3 0.2 2 23 152 173 151 173 0.93 2 15 0.0017 0.14 13.8 2.4 1 23 179 201 179 201 0.96 3 15 0.0049 0.4 12.4 0.2 1 21 293 313 293 314 0.94 4 15 0.00037 0.03 15.9 0.5 1 23 350 372 350 372 0.98 5 15 0.00065 0.053 15.1 0.1 3 23 449 470 447 470 0.92 6 15 0.023 1.9 10.2 0.1 1 23 485 507 485 507 0.96 7 15 0.023 1.9 10.2 0.1 1 23 631 653 631 653 0.96 8 15 0.023 1.9 10.2 0.1 1 23 777 799 777 799 0.96 9 15 0.023 1.9 10.2 0.1 1 23 923 945 923 945 0.96 10 15 0.023 1.9 10.2 0.1 1 23 1069 1091 1069 1091 0.96 11 15 0.023 1.9 10.2 0.1 1 23 1215 1237 1215 1237 0.96 12 15 2.8e-05 0.0022 19.4 0.2 1 23 1263 1285 1263 1285 0.98 13 15 0.0018 0.15 13.7 0.2 1 23 1291 1313 1291 1313 0.97 14 15 0.001 0.083 14.5 0.3 1 23 1319 1341 1319 1342 0.95 15 15 0.039 3.1 9.5 1.2 1 23 1355 1377 1355 1377 0.95
Sequence Information
- Coding Sequence
- ATGGATGGTGATGGAGAGGATTTTAATCTCCACTGGGAGGAGGAAGAAGTGGAGACAAAGcaCATCCCAGGTGTAGTAGCTTCAGAAGTCATATGTGGCTTAGAGAATGTGCAAGATGGTGTCATCTGTGGCTTAGAGAATGTGCAATCTGGTTCCTACTCGAACATGAACTCTGAAGTAATAATACAAGACACAGATCAGATAGCCGCAGAAAACCTGATGTTCTTGTCTCAGGATGTAGTCAGCTACACAGACGCTGCCGAGTTGGCAGTAGACCCCAATGTGGAGTGTGTTACGGAGGAGGTGATTACGGATGACTGGACTGGAGGACAGGACAGAGTTGAAGTACCACTGGACCACTTTGCAAACCCGGTGTTAGACGTAAAAGAGGAAAACGACGTGGATGTTCCATTACCGACTGATCAGGACCAATACACGGCGATGCGTCCATGGCCGTGCGACTTCTGCTCCCGACGGTTCCGCAAGAAGGCCGCCCTCATGAACCACATGGTGGCGCACCAGAACGACCGGCCGCACGCTTGCAACCTGTGCGGCGTGCGCTACGTGCGCAAGTGCGACCTCATGAACCACCTCAAGGTCCACGCCATGGTGCCGGACAACGCGGACCCGGTCGACTTCGAAGACGTACTAGATAACAGTCAAGCAATAAAACCAAAGAAAAAGAGAGGGAGACGAAAAAAGAATACCGAACCGATAAAAGAAGAAAATGGTATGTGGGAGAACATGACCTCAGCCCGCACCATGCAGTGGTCACGGCGTGCACGCTCCCCCGCGCCGGCGCGGgccgcctcgccgccgccgccgccgtcgccgccgtccgagccctcgccgccgcccgccgacCCCAGCCGGCCCTTCGTGTGCCGACACTGCGGCGTGGGCTTCGCCAGGGAGAAGGCTCTGCAGTCACACTCCAGGTGGTCACGGCGTGCACGCTCCCCCGCGCCGGCGCGGgccgcctcgccgccgccgccgccgtcgccgccgtccgagccctcgccgccgcccgccgacCCCAGCCGGCCCTTCGTGTGCCGACACTGCGGCGTGGGCTTCGCCAGGGAGAAGGCTCTGCAGTCACACTCCAGGGTGCACGGCGGCGATTCTCCCGTGGATTGCGGCTCGTGCGGCGAGCTGTGCTGGTCGCGCGAGGCGCtggcggcgcacgcgcggcTGCGGCACCCGCACCAGCCGCCGCAGTCGCAGCGGGAGCCCTACGACTCCAACTCGGGTGACGACGACATGGAGTACCAACTGTCGCCTCTAGCCGACAGCGGCAGCGAGCGAGCCGTGTACGACACTCAGCGCGGCCCCGAGCTGTTCTGCCAGGACTGCGGCGTCGCCTTCCAGCGCGCAGACTTACTGCGCCGGCACCAGGCCGCAGCACACAGCCACAAGCGGCACGACAGCTCGTCGTCCACGTGGGCGGAGCACTCGTGCGACGTGTGCGGCGAGGCGTGCGCCGACGCGCTGCAGCTGCTCGCGCACGCCGAGCGCCACGCCGACCGCGAGCCGCCCGCCAGGTACGCGACACCTTACACAAGCGGCACGACAGCTCGTCGTCCACGTGGGCGGAGCACTCGTGCGACGTGTGCGGCGAGGCGTGCGCCGACGCGCTGCAGCTGCTCGCGCACGCCGAGCGCCACGCCGACCGCGAGCCGCCCGCCAGGTACGCGACACCTTACACAAGCGGCACGACAGCTCGTCGTCCACGTGGGCGGAGCACTCGTGCGACGTGTGCGGCAAGGCGTGCGCCGACGCGCTGCAGCTGCTCGCGCACGCCGAGCGCCACGCCGACCGCGAGCCGCCCGCCAGGTACGCGACACCTTACACAAGCGGCACGACAGCTCGTCGTCCACGTGGGCGGAGCACTCGTGCGACGTGTGCGGCGAGGCGTGCGCCGACGCGCTGCAGCTGCTCGCGCACGCCGAGCGCCACGCCGACCGCGAGCCGCCCGCCAGGTACGCGACACCTTACACAAGCGGCACGACAGCTCGTCGTCCACGTGGGCGGAGCACTCGTGCGACGTGTGCGGCGAGGCGTGCGCCGACGCGCTGCAGCTGCTCGCGCACGCCGAGCGCCACGCCGACCGCGAGCCGCCCGCCAGGTACGCGACACCTTACACAAGCGGCACGACAGCTCGTCGTCCACGTGGGCGGAGCACTCGTGCGACGTGTGCGGCGAGGCGTGCGCCGACGCGCTGCAGCTGCTCGCGCACGCCGAGCGCCACGCCGACCGCGAGCCGCCCGCCAGGTACGCGACACCTTACACAAGCGGCACGACAGCTCGTCGTCCACGTGGGCGGAGCACTCGTGCGACGTGTGCGGCGAGGCGTGCGCCGACGCGCTGCAGCTGCTCGCGCACGCCGAGCGCCACGCCGACCGCGAGCCGCCCGCCAGGTACGCGACACCTTACACAAGCGGCACGACAGCTCGTCGTCCACGTGGGCGGAGCACTCGTGCGACGTGTGCGGCGAGGCGTGCGCCGACGCGCTGCAGCTGCTCGCGCACGCCGACCGCCACGCCGACCGCGAGCCGCCCGCCAGGTACGCGACACCTTACACAAGCGGCACGACAGCTCGTCGTCCACGTGGGCGGAGCACTCGTGCGACGTGTGCGGCGAGGCGTGCGCCGACGCGCTGCAGCTGCTCGCGCACGCCGAGCGCCACGCCGACCGCGAGCCGCCCGCCAGGTACGCGACACCTTACACAAGCGGCACGACAGCTCGTCGTCCACGTGGGCGGAGCACTCGTGCGACGTGTGCGGCGAGGCGTGCGCCGACGCGCTGCAGCTGCTCGCGCACGCCGAGCGCCACGCCGACCGCGAGCCGCCCGCCAGGTACGCGACACCTTACACAAGCGGCACGACAGCTCGTCGTCCACGTGGGCGGAGCACTCGTGCGACGTGTGCGGCGAGGCGTGCGCCGACGCGCTGCAGCTGCTCGCGCACGCCGAGCGCCACGCCGACCGCGAGCCGCCCGCCAGGTACGCGACACCTTACACAAGCGGCACGACAGCTCGTCGTCCACGTGGGCGGAGCACTCGTGCGACGTGTGCGGCGAGGCGTGCGCCGACGCGCTGCAGCTGCTCGCGCACGCCGAGCGCCACGCCGACCGCGAGCCGCCCGCCAGGTACGCGACACCTTACACAAGCGGCACGACAGCTCGTCGTCCACGTGGGCGGAGCACTCGTGCGACGTGTGCGGCGAGGCGTGCGCCGACGCGCTGCAGCTGCTCGCGCACGCCGAGCGCCACGCCGACCGCGAGCCGCCCGCCAGGTACGCGACACCTTACACAAGCGGCACGACAGCTCGTCGTCCACGTGGGCGGAGCACTCGTGCGACGTGTGCGGCGAGGCGTGCGCCGACGCGCTGCAGCTGCTCGCGCACGCCGAGCGCCACGCCGACCGCGAGCCGCCCGCCAGGTACGCGACACCTTACACAAGCGGCACGACAGCTCGTCGTCCACGTGGGCGGAGCACTCGTGCGACGTGTGCGGCAAGGCGTGCGCCGACGCGCTGCAGCTGCTCGCGCACGCCGAGCGCCACGCCGACCGCGAGCCGCCCGCCAGGTACGCGACACCTTACACAAGCGGCACGACAGCTCGTCGTCCACGTGGGCGGAGCACTCGTGCGACGTGTGCGGCGAGGCGTGCGCCGACGCGCTGCAGCTGCTCGCGCACGCCGAGCGCCACGCCGACCGCGAGCCGCCCGCCAGGTTCAAGAAGTCGCGCGGAAGAAATAACACATCTTCAAGTAGTTCGCGGCAATTCCCTTGCAGAGAATGCGGCAAGGTGTTCGGATCACGCAGCTCTCAGCAAATCCACATCCGCATTCACACGGGAGAGCGACCCTACGCATGTCGCTTCTGTTGGAAGGCGTTCGCGGACGGCGGCACGCTGAGGAAACACGAACGGATTCACACCGGAGAGAAGCCGTACGCGTGCGCGGTGTGCCCGCGCGCGTTCAACCAGCGCGTGGTGCTGCGCGAGCACGTGCGCTCGCACCACTCCGCGCCCGACCGCCGCGCCAACGGCGGGCCGTCGTTCTGCTGCGTGGTATGCGGCCGGACGCTGCACTCGAGCGCGGAGCTGGTGCAGCACCTCATACAACACTGCGACGCCAACACCGCGCTCAAGCGGCAGCCGCAGGTAACTTGA
- Protein Sequence
- MDGDGEDFNLHWEEEEVETKHIPGVVASEVICGLENVQDGVICGLENVQSGSYSNMNSEVIIQDTDQIAAENLMFLSQDVVSYTDAAELAVDPNVECVTEEVITDDWTGGQDRVEVPLDHFANPVLDVKEENDVDVPLPTDQDQYTAMRPWPCDFCSRRFRKKAALMNHMVAHQNDRPHACNLCGVRYVRKCDLMNHLKVHAMVPDNADPVDFEDVLDNSQAIKPKKKRGRRKKNTEPIKEENGMWENMTSARTMQWSRRARSPAPARAASPPPPPSPPSEPSPPPADPSRPFVCRHCGVGFAREKALQSHSRWSRRARSPAPARAASPPPPPSPPSEPSPPPADPSRPFVCRHCGVGFAREKALQSHSRVHGGDSPVDCGSCGELCWSREALAAHARLRHPHQPPQSQREPYDSNSGDDDMEYQLSPLADSGSERAVYDTQRGPELFCQDCGVAFQRADLLRRHQAAAHSHKRHDSSSSTWAEHSCDVCGEACADALQLLAHAERHADREPPARYATPYTSGTTARRPRGRSTRATCAARRAPTRCSCSRTPSATPTASRPPGTRHLTQAARQLVVHVGGALVRRVRQGVRRRAAAARARRAPRRPRAARQVRDTLHKRHDSSSSTWAEHSCDVCGEACADALQLLAHAERHADREPPARYATPYTSGTTARRPRGRSTRATCAARRAPTRCSCSRTPSATPTASRPPGTRHLTQAARQLVVHVGGALVRRVRRGVRRRAAAARARRAPRRPRAARQVRDTLHKRHDSSSSTWAEHSCDVCGEACADALQLLAHAERHADREPPARYATPYTSGTTARRPRGRSTRATCAARRAPTRCSCSRTPTATPTASRPPGTRHLTQAARQLVVHVGGALVRRVRRGVRRRAAAARARRAPRRPRAARQVRDTLHKRHDSSSSTWAEHSCDVCGEACADALQLLAHAERHADREPPARYATPYTSGTTARRPRGRSTRATCAARRAPTRCSCSRTPSATPTASRPPGTRHLTQAARQLVVHVGGALVRRVRRGVRRRAAAARARRAPRRPRAARQVRDTLHKRHDSSSSTWAEHSCDVCGEACADALQLLAHAERHADREPPARYATPYTSGTTARRPRGRSTRATCAARRAPTRCSCSRTPSATPTASRPPGTRHLTQAARQLVVHVGGALVRRVRQGVRRRAAAARARRAPRRPRAARQVRDTLHKRHDSSSSTWAEHSCDVCGEACADALQLLAHAERHADREPPARFKKSRGRNNTSSSSSRQFPCRECGKVFGSRSSQQIHIRIHTGERPYACRFCWKAFADGGTLRKHERIHTGEKPYACAVCPRAFNQRVVLREHVRSHHSAPDRRANGGPSFCCVVCGRTLHSSAELVQHLIQHCDANTALKRQPQVT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -