Ebil030022.1
Basic Information
- Insect
- Epinotia bilunana
- Gene Symbol
- -
- Assembly
- GCA_947049265.1
- Location
- CAMRIQ010000388.1:27620-35711[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 24 0.11 8.9 8.1 0.1 2 23 7 28 7 28 0.95 2 24 5.7 4.6e+02 2.7 0.1 1 11 50 60 50 63 0.87 3 24 2 1.6e+02 4.2 1.6 2 23 111 133 110 133 0.93 4 24 6 4.9e+02 2.6 0.2 3 23 157 177 156 177 0.94 5 24 0.0019 0.16 13.6 3.3 1 23 199 221 199 221 0.95 6 24 0.18 15 7.4 0.5 1 22 225 246 225 246 0.93 7 24 0.00041 0.034 15.7 2.8 1 23 395 417 395 417 0.97 8 24 8.4e-06 0.00068 21.1 1.1 1 23 421 443 421 443 0.98 9 24 0.0022 0.18 13.4 0.0 1 23 448 471 448 471 0.96 10 24 0.002 0.16 13.6 0.2 2 23 478 500 477 500 0.97 11 24 0.77 63 5.4 0.2 1 11 507 517 507 521 0.87 12 24 2 1.6e+02 4.2 1.6 2 23 567 589 566 589 0.93 13 24 6 4.9e+02 2.6 0.2 3 23 613 633 612 633 0.94 14 24 0.0028 0.23 13.1 3.4 1 23 655 677 655 677 0.95 15 24 0.059 4.8 9.0 0.3 1 22 681 702 681 702 0.94 16 24 0.63 51 5.7 0.8 1 23 760 783 760 783 0.92 17 24 0.00041 0.034 15.7 2.8 1 23 848 870 848 870 0.97 18 24 8.4e-06 0.00068 21.1 1.1 1 23 874 896 874 896 0.98 19 24 0.0022 0.18 13.4 0.0 1 23 901 924 901 924 0.96 20 24 0.00083 0.067 14.8 0.4 2 23 931 953 930 953 0.98 21 24 0.0017 0.14 13.8 0.3 1 23 960 983 960 983 0.97 22 24 7.2 5.8e+02 2.4 4.0 1 23 989 1011 989 1011 0.89 23 24 3.3e-06 0.00027 22.3 0.6 1 23 1017 1039 1017 1039 0.99 24 24 0.011 0.91 11.2 4.3 1 23 1045 1067 1045 1068 0.95
Sequence Information
- Coding Sequence
- ATGGACTTCACCGCTGCATCTTGTAAGATTTGTACAGCTGAAATTAGCGACTATGCCATGCTGAAAGCTCACATGTCCGCTCATGGGCACTCTATCGACACGACGCGTGGAGATACCATCCATCCTTACTACCTGGACTCCGAGAAACATGTCTGCCAGATatgcaatatcatgtttgaatCGTTTGTGGgATCGAACAGTGAAGAAACCGTTCAGACTAGTAAGGAATTAAGTGAAGCAGAGCTTTGGCGAGCCAACTTAAGAAATAATGTTTCTACTATCATAACCGCGACCACCGTGTACCCCTTTAAATACAAAAGGGGACAATTCCTCTGTTTCTTCTGCAAAGATACATTTCCAGAAGCAGAGAAGCTTCGCCAGCACAACCGCAAACAACATTACGACGTTAAACAACCGCCTAGACCTAAAAGTTACGATCCGATGAAAATGGACCTAGCGGAAGCTTCTTGTAAACTTTGCTCAGTCGAAATTAAAGATTACGTCATGTTAAAACTCCATTTGACCGAACACGACCGATCACTTGACACAACACAAGGCGAGACGGTGCATCCGTTTAGCTTGGTCGGGAACAAGCACATATGCCAGTTCTGCGGAAAAGCATACGAATCTCTACAGAGCTTATTCCGACACATGCATGAACATTCAGATCGGCACATATGTGAGAAGTGTGGAAGTAGATTCATGAATTCTCTACAGATGGCTAACCATACCAGAATGAAAGAATGCGGTACGTCTAGCAAAAGGAAATCCGTTGAGATGTGCGATATTGTAGTTGACCAACAGGCCGATGAGCGATATGATAGCGAACGGAGGCGCATTAGCATAAGAAACAATGTTTCCACAATCATAGTCACGACCACAGTCTACCCGTTTCGATACGTTAAAGGGCTTTATCTTTGCTACTACTGTAACGACACGTTTCTAGAACCACCTATGCTTCGGCAGCACAACCGCGAACAACACTCTGAAGTAAAACTGTTACCTAAAAACCTCAAAGTCGAACCTGCAAAAATGGACTTTGTAGGCGCTTCATGCAAGCTTTGTTTAGCGGACATTCCTGATTATCCCACGTTGAAGGCTCATTTGGCCGAACACGGGAAAGAGTTGGATATGTCTCGCGGTGACTGCATAATTCCCTACAACTTGAACAGTACTTCTGAGCACGTTTGTCAAATCTGTGGAAAAAAGTATGAAACGTTCGTGAGTTTACACAGACATATCAACGAGCATTACGACAGTTACATATGCGATAAATGTGGGAAAAAATTCATAACTTCCCGACAGATGGTCAAACATGCCCGCACACACAAACAAGGCGTCTTTCCCTGCAAAGAATGCGACCAGACGTTCCCAATGCTCGCGCCTCTAACTTCACACATTGCCAAAGTACATAAATCTAAAGCGCGAAACAAATGTCCTATTTGCGACGAGAGATTTGCCTTTTACGGACAAAGACTGAAACATCTACGAATTGTCCACGATCAGAAAACACCCAGTTTTCCTTGTCCTTCGTGTGATAAAGTTTTCGACTTGAGTGgATCGAACAGTGAAGAAACCGTTCAGACTAGTAAGGAATTAAGCGAAGCAGAGCTTTGGCGAGCCAACTTAAGAAATAATGTTTCTACTATTATAACCGCGACCACCGTGTACCCCTTTAAATACAAAAGGGGACAATTCCTCTGTTTCTTCTGCAAAGATACATTTCCAGAAGCAGAGAAGCTTCGCCAGCACAACCGCAAACAACATTACGACGTTAAACAACCGCCTAGACCTAAAAGTTACGATCCGATGAAAATGGACCTTGCGGAAGCTTCTTGTAAACTTTGCTCAGTCGAAATTAAAGATTACGTCATGTTAAAACTCCATTTGACCGAACACGACCGATCACTTGACACAACACAGGGCGAGACGGTGCATCCGTTTAGCTTGGTCGGGAACAAGCACATATGCCAGTTCTGCGGAAAAGCATACGAATCTCTACAGAGCTTATTCAAACACATGCATGAACATTCAGATCGGCACATATGTGAGAAGTGTGGAAGTAGATTTATGAATTCTCTACAGATGGCTAACCATATCAGAATGAAAGAATGTGGTACGTCTGGCAAAAAGGATTCCGTTGAAGTCTGCGATATTGTCGACCAACATGCCGATGAGCGATATGATAGCGAACGGAGGCGCATTAGTATAAGAAACAATGTTTCCACAATCATAGTCACGACCACAGTCTACCCGTTTCGATACGTTAAAGGGGTTTATCTTTGTTACTACTGTAAATACACGTTTTTAGAACCAGCTATGCTTCGACAGCACAACCGCGAACAACACTCTGAAGTAAAACAGTTACCTAAAAGTTACGAACCTGCAAAAATGGACTTTGTATGTGCTTcatgcaagctttgcttagcgGAAATTCCCGACTATCCCGCGTTGAAGGCTCATTTGGCCGAACACGGGAAAGAGTTGGATATGTCTCACGGTGACTGCATAATTCCCTACAACTTGAACAGTACTACTGAGCACGTTTGTCAAATCTGTGGAAAAAAGTATGAAACGTTCGTGAGTTTACACAGACATATCAACGAGCATTACGACAGTTACATATGCGATAAATGTGGGAAAAAGTTCATAACTTCCCGACAGATGGTCAAACATGCCCGCACACACAAACAAGGCGTCTTTCCCTGCAAAGAATGCGACCAGACGTTCCCAATGCTCGCGCCTCTAACTTCACACATTGCCAAAGTACATAAATCTAAAGCGCGAAACAAATGTCCTATTTGCGACGAGAGATTTGCCTTTTACGGACAAAGACTGAAACACCTACGAACTGTCCACGATCAGAAAACACCCAGTTTTCCGTGCCCTTTGTGTGATAGGGTTTTCAATTTGAGCAGCAAAAGATCTGGTCATATAAGGACTCAACACTTGCAGGAGAAAAAACATGAATGCAAAGTGTGTGGTATGAATTTTTTTTGCAAGCGCGGGTTGGAGGAACACTTTGTGAAACATGGTGGTGAGAAGAAGTACCAGTGTGAAGTTTGCAAGAAAGCGTACGCTCGGTTGAAGACTTTACGAGAGCACATGCGCATTCACAACAATGACAGGCGTTTCACTTGTGCCGCGTGTGGCCTAGCCTTCGTCCAGAAGTGTAGCATGAAGCATCATATCAAAGTACACCATCCTACACTTTTGAAAAATGAAATCGAATCGTGA
- Protein Sequence
- MDFTAASCKICTAEISDYAMLKAHMSAHGHSIDTTRGDTIHPYYLDSEKHVCQICNIMFESFVGSNSEETVQTSKELSEAELWRANLRNNVSTIITATTVYPFKYKRGQFLCFFCKDTFPEAEKLRQHNRKQHYDVKQPPRPKSYDPMKMDLAEASCKLCSVEIKDYVMLKLHLTEHDRSLDTTQGETVHPFSLVGNKHICQFCGKAYESLQSLFRHMHEHSDRHICEKCGSRFMNSLQMANHTRMKECGTSSKRKSVEMCDIVVDQQADERYDSERRRISIRNNVSTIIVTTTVYPFRYVKGLYLCYYCNDTFLEPPMLRQHNREQHSEVKLLPKNLKVEPAKMDFVGASCKLCLADIPDYPTLKAHLAEHGKELDMSRGDCIIPYNLNSTSEHVCQICGKKYETFVSLHRHINEHYDSYICDKCGKKFITSRQMVKHARTHKQGVFPCKECDQTFPMLAPLTSHIAKVHKSKARNKCPICDERFAFYGQRLKHLRIVHDQKTPSFPCPSCDKVFDLSGSNSEETVQTSKELSEAELWRANLRNNVSTIITATTVYPFKYKRGQFLCFFCKDTFPEAEKLRQHNRKQHYDVKQPPRPKSYDPMKMDLAEASCKLCSVEIKDYVMLKLHLTEHDRSLDTTQGETVHPFSLVGNKHICQFCGKAYESLQSLFKHMHEHSDRHICEKCGSRFMNSLQMANHIRMKECGTSGKKDSVEVCDIVDQHADERYDSERRRISIRNNVSTIIVTTTVYPFRYVKGVYLCYYCKYTFLEPAMLRQHNREQHSEVKQLPKSYEPAKMDFVCASCKLCLAEIPDYPALKAHLAEHGKELDMSHGDCIIPYNLNSTTEHVCQICGKKYETFVSLHRHINEHYDSYICDKCGKKFITSRQMVKHARTHKQGVFPCKECDQTFPMLAPLTSHIAKVHKSKARNKCPICDERFAFYGQRLKHLRTVHDQKTPSFPCPLCDRVFNLSSKRSGHIRTQHLQEKKHECKVCGMNFFCKRGLEEHFVKHGGEKKYQCEVCKKAYARLKTLREHMRIHNNDRRFTCAACGLAFVQKCSMKHHIKVHHPTLLKNEIES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -