Ebil027167.1
Basic Information
- Insect
- Epinotia bilunana
- Gene Symbol
- -
- Assembly
- GCA_947049265.1
- Location
- CAMRIQ010000330.1:337418-337777[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.00036 0.18 12.7 0.0 14 31 20 36 16 51 0.85 2 2 0.0058 2.9 8.8 0.1 12 39 77 104 66 109 0.90
Sequence Information
- Coding Sequence
- ATGGGGCGAATAAACCTAGAAGTTCGCAAAAATATTTTGGACGACTGGTGCAAATTAAAGGGGATGACGTTCAGAAAGCTCGCTAAAAAGTATAATGTTAGTCCGTCAGGTGTGCACAAATTGATAAAAAAGTTCGGTGAAACTACTACTTTACAAGATCTGCCTAAGTCTGGCAGGAAGCAAGGTACATGGGACGCGGCACTGGAGAAGAAAGTGATACGGATGCTTGTACAAAAACCGTCTCTCTCGGTACGAGACGCCGCGAAAAAAGCCAATACTTCGTCTTCAACGATCCAGCGAATCAAACGCAGGTGTAATTTAAAAAcctacaaaaaaacaaaaacagccaAAACGAGATGA
- Protein Sequence
- MGRINLEVRKNILDDWCKLKGMTFRKLAKKYNVSPSGVHKLIKKFGETTTLQDLPKSGRKQGTWDAALEKKVIRMLVQKPSLSVRDAAKKANTSSSTIQRIKRRCNLKTYKKTKTAKTR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -