Ebil022757.1
Basic Information
- Insect
- Epinotia bilunana
- Gene Symbol
- -
- Assembly
- GCA_947049265.1
- Location
- CAMRIQ010000256.1:2008727-2011420[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.3e-09 1.1e-06 29.3 0.1 2 38 16 51 15 54 0.91
Sequence Information
- Coding Sequence
- ATGGGACGTACAAAAGTATTGAAGAGGAAAAAAGGAGACCATACGGCCGAAAATATGTTACGTGCCATCCAAATATATAGGACGGGGATGAGTTTGAGAAAGGCGGCAAAGGAATGTGATGTTCATTATCCGACGCTATATCGCTATGCAAAGAAGTTTGCAGCTGTAAATGATGCTAACTTAATAAATCAAAGATTAATTCCGAATTACGACGTCAACAGAACCTTTTCGGAAGAACAAGAAGCTGAACTAAAAGAATACGTAATAGATTGCGCGGCAAAGTTTTATGGCCTTTCTAGTAAAGATGTCCGAAGCGTTGCGTTCCAGATGGcacgtataaataaaattaaatatcctGCTTGCTGGGAGGCTGACCAATTGGCAGGTATCGAGTGGTTTCGATCTTTTAGGGGTAGGCACCCtgatttatcattaaaaaagcCTGAAGCGTGCAGTCTAGCGCGGGCTACTGCCTTTAATAGACACACGGTCGGTAATTTTTTTACCAATTTGCAAAATGCCATGGACAGACACCCGACTTTCGGAACTGGCTGTAGAGTATACAACTTAGATGAAACTGCAACGGGTACcgtacaaaaaacaaaaaaagtcaTGGCTCCGAAGGGCCGGCACAATCTAGGGCAGATAACAAGCGGCGAAAGAGGGACACTAGTCACGACGTGTGCTATTGTATGCGCTTCAGGGCAAGCTTTACCTCCAGTGCTTGTTTTCCCGCGAAAAAATTACAAGGATTATATGTTGACCGGTGCACCTCCAGGGTCCCTTGGACTGGCTGCCGCCAGTGGGTGGATGAATGCCGAGCTATTTGTCCAAGTGATGCAGCATTTCATAACACATACATGTGCGTCTCCAGAAAACCCCGCATTATTGATCATGGACAATCATGAGTCCCATTTAAGTATTGAGGCTTTAGATTTGGCCAAAAAGTCTGGGGTCTGTATTCTTACTCTGCACCCACACACAACAGCTAAAATGCAGCCACTTGATGTTGGCTTAAACGGACCATTTAAAACCTATTATAACGGTGCCGTAGATTCGTGGTTGCGACGAAACCCCGGCAAACAAATGACAATCTACAATGTCGCCGACTGTGTGGGTCAAGCTTACCCAAAGGCAATGACGCCATTGAATATAGCAGCAGCGTTCAAAAAATGTGGAATCTTTCCATATAACGCAGACATTTTTGAAGATGTTGATTTTCTGCCATCAGAAGTTACTAACAGAGAGCAGCCTGAAGCTTTCTCGGGATTGCCCACACCGGCTTCCTCAGTAATCGCTGACAGAGGTCAGCCTGGGCCATCCTCAAGATCGTCCACCACAGCTGCTAAAGCAATCACCAACAGGGAACAGCCTGGACCATCCTCAAGATCGTCCACCACAGTTGCTAAAGCAATCACCAACAGGGAACAGCCTGGACCATCCTCAAGATCGTCCACCACAGCTGCTAAAGCAATCACCAACAGGGAACAGCCTGGACCATCCTCAAGATCGTCCACCACAGCTGCTAAAGCAATCACCAACAGGGAACAGCCTGGACCATCCTCAAGATCGTCTACCACAGCTGCTAAAGCAATCACCAACAGGGAACAGCCTGGACCATCCACAGAATTGCATACATCTGCTTTCTCTGACCACCTGCGCTGCGAGTCAATATGTCCTGGCAGTCCCTCGTCAGATATAACGTTCGTTGAAAGTCCTCAATCATCACAAGCTGGAAGTTCTCCACTACCACAAGCTGAAAGTCCATTCATGGCATTCATGGTGGAAACAGATGGGGTCAGTTCTCCACCACCACTAGGTGAAAGTCCATCCATAATGGAAACAGATGGGGTTTTTGCTGAATCCCTTTTGCATGACGCGTTCATACCATCACAGGACTTGAATTTACTTACTCCAAGAGAAATAACACCGCCTTTTGCTGTCGAAGAAAGGGTTAGGGGAATGACGCCGCCTTGCGACACTCTTGGTGCCGCAAGCACCTCTTCTGGTACCCTAATGAAATTCAAGTCACCCAAAGATTTTATGGCACCTTTAAAAGCTGGCCCACGAACTGAAGGGCGCAAGCCAAGGAAGTTGGGTAGAAGCATGATTGCAACGGACACGCCGGAAAAAAATGAAATCTCTGTAGAAAGAAACAAAGCTAAAGCAAGAAAATCCGCAAGCATGAAAACAAAGCGGACAGTTCTGAgtgacaaaaaagaaaagcaAAGACGCAAAAAGACTAAACATGACGTCAAACAATCAGATGAAGAAACTAGCGAAGAAGTAGATATGGTGTTATGCCAAAGTGAAACAGAATTTTCTGACTTGGATGACGAAGATGAAAACTCCAAAGATAATTTACCATTAGTGAAAGAAAATTTCAAACCAATTAATAGAAAACCGAAAGTAGGCGATTACGTTTTGGTGGGTTTTGAAACtaaaaaacttgaaatatgctACGTCGCGTTGATTACTGAAAAAGTAAGTGCTAATGCATATATTGTTTCCTTCATGAGAATGAAAAACAAGactgaaatgaaattttatatgcCTCTGGAGCCAGATCTTTCAGAAATAAGACCGACGGATATAAAGATGTACTTGCCTAAGCCAACAATTACTGGCACCAAAAACCGAAATTCTTTCTATGTTTTCCCAGTTCGTCTGTCACCGAAGCTAAATTTGCGTTAA
- Protein Sequence
- MGRTKVLKRKKGDHTAENMLRAIQIYRTGMSLRKAAKECDVHYPTLYRYAKKFAAVNDANLINQRLIPNYDVNRTFSEEQEAELKEYVIDCAAKFYGLSSKDVRSVAFQMARINKIKYPACWEADQLAGIEWFRSFRGRHPDLSLKKPEACSLARATAFNRHTVGNFFTNLQNAMDRHPTFGTGCRVYNLDETATGTVQKTKKVMAPKGRHNLGQITSGERGTLVTTCAIVCASGQALPPVLVFPRKNYKDYMLTGAPPGSLGLAAASGWMNAELFVQVMQHFITHTCASPENPALLIMDNHESHLSIEALDLAKKSGVCILTLHPHTTAKMQPLDVGLNGPFKTYYNGAVDSWLRRNPGKQMTIYNVADCVGQAYPKAMTPLNIAAAFKKCGIFPYNADIFEDVDFLPSEVTNREQPEAFSGLPTPASSVIADRGQPGPSSRSSTTAAKAITNREQPGPSSRSSTTVAKAITNREQPGPSSRSSTTAAKAITNREQPGPSSRSSTTAAKAITNREQPGPSSRSSTTAAKAITNREQPGPSTELHTSAFSDHLRCESICPGSPSSDITFVESPQSSQAGSSPLPQAESPFMAFMVETDGVSSPPPLGESPSIMETDGVFAESLLHDAFIPSQDLNLLTPREITPPFAVEERVRGMTPPCDTLGAASTSSGTLMKFKSPKDFMAPLKAGPRTEGRKPRKLGRSMIATDTPEKNEISVERNKAKARKSASMKTKRTVLSDKKEKQRRKKTKHDVKQSDEETSEEVDMVLCQSETEFSDLDDEDENSKDNLPLVKENFKPINRKPKVGDYVLVGFETKKLEICYVALITEKVSANAYIVSFMRMKNKTEMKFYMPLEPDLSEIRPTDIKMYLPKPTITGTKNRNSFYVFPVRLSPKLNLR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00658308; iTF_00658309; iTF_00658310; iTF_00658311; iTF_00658312; iTF_00660248; iTF_00658299; iTF_00658300; iTF_00658301; iTF_00658303; iTF_00658307; iTF_00658314; iTF_00658313;
- 90% Identity
- iTF_00658308; iTF_00658309; iTF_00658310; iTF_00658311; iTF_00658312; iTF_00660248; iTF_00658299; iTF_00658300; iTF_00658307; iTF_00658314; iTF_00658313; iTF_00658301; iTF_00658303;
- 80% Identity
- -