Ebil017297.1
Basic Information
- Insect
- Epinotia bilunana
- Gene Symbol
- -
- Assembly
- GCA_947049265.1
- Location
- CAMRIQ010000176.1:1048262-1048714[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-09 7.9e-07 29.8 0.1 4 39 22 57 19 62 0.89 2 2 2.3 1.1e+03 0.5 0.1 16 23 135 142 131 143 0.89
Sequence Information
- Coding Sequence
- ATGGAACCTGTCGACAATCCAGCACCTAAACCAAAGCGGAAACATGCACAATGGTCTGAGCACCAAATTACTTGTGCTATGAGGGCTGTACAAAGAAATATTCTTTCTCAAAGAGAAGCTGCTACAAGATACAAGATTCCACGACGAACATTGAGGAACCACCTAAAGACTGGCTCATTGGAAAGGAAGTTAGGAAGATCAGCCACCCTAACCCCAGAACAAGAAGAAGATTTAGTTAGTAGGATAATACGCTTAGCTGGAGTGGGAATGCCCCTAACACCTAAACTTGTTCGAAAGCAAGCATACGTTTTTTGTGAAAAACACAACATACCTAATCGCTTTAATGATGACACTTCTACAGCAGGAAAAAAATGGCTGAAACTGTTCATGAAGAGACATCCCCAACTTTCTCAGCGAAAAGCCCAGATGATGAACCCAGCCAGGGCCCAATAA
- Protein Sequence
- MEPVDNPAPKPKRKHAQWSEHQITCAMRAVQRNILSQREAATRYKIPRRTLRNHLKTGSLERKLGRSATLTPEQEEDLVSRIIRLAGVGMPLTPKLVRKQAYVFCEKHNIPNRFNDDTSTAGKKWLKLFMKRHPQLSQRKAQMMNPARAQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01078134;
- 90% Identity
- -
- 80% Identity
- -