Ebil031563.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Epinotia bilunana
Gene Symbol
-
Assembly
GCA_947049265.1
Location
CAMRIQ010000427.1:216833-224193[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 22 1.3 6.5e+02 1.3 0.0 18 34 218 234 211 241 0.88
2 22 1.5 7.3e+02 1.1 0.0 18 34 249 265 248 272 0.87
3 22 1.5 7.3e+02 1.1 0.0 18 34 280 296 279 303 0.87
4 22 1.5 7.3e+02 1.1 0.0 18 34 311 327 310 334 0.87
5 22 1.5 7.3e+02 1.1 0.0 18 34 342 358 341 365 0.87
6 22 1.5 7.3e+02 1.1 0.0 18 34 373 389 372 396 0.87
7 22 1.5 7.3e+02 1.1 0.0 18 34 404 420 403 427 0.87
8 22 1.5 7.3e+02 1.1 0.0 18 34 435 451 434 458 0.87
9 22 1.5 7.3e+02 1.1 0.0 18 34 466 482 465 489 0.87
10 22 1.5 7.3e+02 1.1 0.0 18 34 497 513 496 520 0.87
11 22 1.5 7.3e+02 1.1 0.0 18 34 528 544 527 551 0.87
12 22 1.5 7.3e+02 1.1 0.0 18 34 559 575 558 582 0.87
13 22 1.5 7.3e+02 1.1 0.0 18 34 590 606 589 613 0.87
14 22 1.5 7.3e+02 1.1 0.0 18 34 621 637 620 644 0.87
15 22 1.5 7.3e+02 1.1 0.0 18 34 652 668 651 675 0.87
16 22 1.5 7.3e+02 1.1 0.0 18 34 683 699 682 706 0.87
17 22 1.5 7.3e+02 1.1 0.0 18 34 714 730 713 737 0.87
18 22 1.5 7.3e+02 1.1 0.0 18 34 745 761 744 768 0.87
19 22 1.5 7.3e+02 1.1 0.0 18 34 776 792 775 799 0.87
20 22 1.5 7.3e+02 1.1 0.0 18 34 807 823 806 830 0.87
21 22 1.5 7.3e+02 1.1 0.0 18 34 838 854 837 861 0.87
22 22 1.6 7.8e+02 1.0 0.0 18 34 869 885 868 889 0.86

Sequence Information

Coding Sequence
ATGTATCCAGCCAAAGACAACATGGCGAGCGGCTCGTTCGCGGGCACGGAGGAGGGCGACGGCGGCTCGCTGTGCTCCGAGACAgcggcggaggcggaggcggaggcggaggcggaggcggaCGCGGAGGCGGACGCGGAGGAGAGCGCCACGTACGTGGTGAcgggcggcgtgcgcgcgcgcaccgtgcGCGTGGAGGACGCGCTCGGGGACTCCGTCACCACCGTCATCGACCCTAGTCAACAGATCGTCGAGTCGTGCGTGGGCGCGGACGGCGAGCGCAGCTACCTGGTGCTGgacccggcgcgcgcgctgaCCTGCACGGTGCTGGACCGCACGCTCGCGCTCGAGCTCGAgccgcgctgccggccgctcgcgccgcgcgccgcgcccgcgcccgcgcccgcgcccgcgcccgcgcccgcgcccgcgccgcccggcaCGAGCGCCAGCGACGAGCTCGCCAGGTGGCGCGCCCTGGACTACGGTACGTGCTCGGTGCTTGTGGTGGTGATGGTTCTTAGAAGGGCGCTCGTGAGTGCCAATATTCCCGCCGCTCTAAAGCCCCAGATCAGACAGAGCGACGGCTGGGCGTGGACGGAAGGCGGCGTGCTGGGCGCGGAGGCGTGCGCGACGCGCGCGCGGCGAGCGGGCACGCgccgggccgcgcgcgcgcacgagctGGCGGCCGACGTGCTCGTGCGCGAGACGCTCACCGACCGGGGTAGGTACGCGCGGCGAGCGGGCACGCgccgggccgcgcgcgcgcacgagctGGCGGCCGACGTGCTCGTGCGCGAGACGCTCACCGACCGGGGTAGGTACGCGCGGCGAGCGGGCACGCgccgggccgcgcgcgcgcacgagctGGCGGCCGACGTGCTCGTGCGCGAGACGCTCACCGACCGGGGTAGGTACGCGCGGCGAGCGGGCACGCgccgggccgcgcgcgcgcacgagctGGCGGCCGACGTGCTCGTGCGCGAGACGCTCACCGACCGGGGTAGGTACGCGCGGCGAGCGGGCACGCgccgggccgcgcgcgcgcacgagctGGCGGCCGACGTGCTCGTGCGCGAGACGCTCACCGACCGGGGTAGGTACGCGCGGCGAGCGGGCACGCgccgggccgcgcgcgcgcacgagctGGCGGCCGACGTGCTCGTGCGCGAGACGCTCACCGACCGGGGTAGGTACGCGCGGCGAGCGGGCACGCgccgggccgcgcgcgcgcacgagctGGCGGCCGACGTGCTCGTGCGCGAGACGCTCACCGACCGGGGTAGGTACGCGCGGCGAGCGGGCACGCgccgggccgcgcgcgcgcacgagctGGCGGCCGACGTGCTCGTGCGCGAGACGCTCACCGACCGGGGTAGGTACGCGCGGCGAGCGGGCACGCgccgggccgcgcgcgcgcacgagctGGCGGCCGACGTGCTCGTGCGCGAGACGCTCACCGACCGGGGTAGGTACGCGCGGCGAGCGGGCACGCgccgggccgcgcgcgcgcacgagctGGCGGCCGACGTGCTCGTGCGCGAGACGCTCACCGACCGGGGTAGGTACGCGCGGCGAGCGGGCACGCgccgggccgcgcgcgcgcacgagctGGCGGCCGACGTGCTCGTGCGCGAGACGCTCACCGACCGGGGTAGGTACGCGCGGCGAGCGGGCACGCgccgggccgcgcgcgcgcacgagctGGCGGCCGACGTGCTCGTGCGCGAGACGCTCACCGACCGGGGTAGGTACGCGCGGCGAGCGGGCACGCgccgggccgcgcgcgcgcacgagctGGCGGCCGACGTGCTCGTGCGCGAGACGCTCACCGACCGGGGTAGGTACGCGCGGCGAGCGGGCACGCgccgggccgcgcgcgcgcacgagctGGCGGCCGACGTGCTCGTGCGCGAGACGCTCACCGACCGGGGTAGGTACGCGCGGCGAGCGGGCACGCgccgggccgcgcgcgcgcacgagctGGCGGCCGACGTGCTCGTGCGCGAGACGCTCACCGACCGGGGTAGGTACGCGCGGCGAGCGGGCACGCgccgggccgcgcgcgcgcacgagctGGCGGCCGACGTGCTCGTGCGCGAGACGCTCACCGACCGGGGTAGGTACGCGCGGCGAGCGGGCACGCgccgggccgcgcgcgcgcacgagctGGCGGCCGACGTGCTCGTGCGCGAGACGCTCACCGACCGGGGTAGGTACGCGCGGCGAGCGGGCACGCgccgggccgcgcgcgcgcacgagctGGCGGCCGACGTGCTCGTGCGCGAGACGCTCACCGACCGGGGTAGGTACGCGCGGCGAGCGGGCACGCgccgggccgcgcgcgcgcacgagctGGCGGCCGACGTGCTCGTGCGCGAGACGCTCACCGACCGGGGTAGGTACGCGCGGCGAGCGGGCACGCgccgggccgcgcgcgcgcacgagctGGCGGCCGACGTGCTCGTGCGCGAGACGCTCACCGACCGGGGTAGGTACGCGCGGCGAGCGGGCACGCgccgggccgcgcgcgcgcacgagctGGCGGCCGACGTGCTCGTGCGCGAGACGCTCACCGACCGGGGTAGGTACGCGCGGCGAGCGGGCACGCgccgggccgcgcgcgcgcacgagctGGCGGCCGACGTGCTCGTGCGCGAGACGCTCACCGACCGGGCGCTGTGCCGCCAGGTGGTGCTGCTGGCGCTGCGGCCCGCGGCCGGCTCGTCATGA
Protein Sequence
MYPAKDNMASGSFAGTEEGDGGSLCSETAAEAEAEAEAEADAEADAEESATYVVTGGVRARTVRVEDALGDSVTTVIDPSQQIVESCVGADGERSYLVLDPARALTCTVLDRTLALELEPRCRPLAPRAAPAPAPAPAPAPAPAPPGTSASDELARWRALDYGTCSVLVVVMVLRRALVSANIPAALKPQIRQSDGWAWTEGGVLGAEACATRARRAGTRRAARAHELAADVLVRETLTDRGRYARRAGTRRAARAHELAADVLVRETLTDRGRYARRAGTRRAARAHELAADVLVRETLTDRGRYARRAGTRRAARAHELAADVLVRETLTDRGRYARRAGTRRAARAHELAADVLVRETLTDRGRYARRAGTRRAARAHELAADVLVRETLTDRGRYARRAGTRRAARAHELAADVLVRETLTDRGRYARRAGTRRAARAHELAADVLVRETLTDRGRYARRAGTRRAARAHELAADVLVRETLTDRGRYARRAGTRRAARAHELAADVLVRETLTDRGRYARRAGTRRAARAHELAADVLVRETLTDRGRYARRAGTRRAARAHELAADVLVRETLTDRGRYARRAGTRRAARAHELAADVLVRETLTDRGRYARRAGTRRAARAHELAADVLVRETLTDRGRYARRAGTRRAARAHELAADVLVRETLTDRGRYARRAGTRRAARAHELAADVLVRETLTDRGRYARRAGTRRAARAHELAADVLVRETLTDRGRYARRAGTRRAARAHELAADVLVRETLTDRGRYARRAGTRRAARAHELAADVLVRETLTDRGRYARRAGTRRAARAHELAADVLVRETLTDRGRYARRAGTRRAARAHELAADVLVRETLTDRGRYARRAGTRRAARAHELAADVLVRETLTDRALCRQVVLLALRPAAGSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-