Basic Information

Gene Symbol
osa
Assembly
GCA_947049265.1
Location
CAMRIQ010000101.1:528976-543315[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.5e-09 6.7e-06 27.5 0.0 40 89 42 87 16 87 0.81

Sequence Information

Coding Sequence
ATGTTGTCGTCCCCGCACTCGCGCTCGCGCCGCCGCGCGGCCCGGCGGCCCGGCTCCGCTCCTTCGTTAACATTCCGACTTATCTCCGCTCGAAACATTCGCACTTTACGTACCGCCGTTTACGTTCAATCGTGTTCGAGCCGATCGGTGACGAAGAACAAGACGTGGAAGGACATCGCGGGGCTGCTGGGCATCGGCGCGTCCTCGTCGGCCGCGTACACGCTGCGCAAGCACTACACCAAGAACCTGCTCGCGTACGAGTGCCACTTCGACCGCGGCGGCATCGACCCGCAGCCCATCATCAACCAGGTCGAGGCCTCCACCAAGAAGAAGGGCGGCAAGTCCAACACCACGCCTAGCGCAGGGTCGTCGAACTCGCAAGAATCATTCCCTCCGTCGGGCGGCGGAGCGGGCGCGCtcgcgggcgcgggagcgggcgcgggcgcgggcgcgggcgccgccatGGAGGCCTACCCCGCGCAGTACCCGCCCTACCCGCCGCAGCCCAACACCTCGCAAGGCGGCGGGCCGGCCGGCGACAACCTCGCCGCCTCCAACCCGTTCGACGAGCCCCCGGGGCCCCGCAGACCCCCAGGTTACCAGCCTGGGTACGGGTACGAATACGGGTCTCCCTACCAGGCCACGAGGCCAGTGTACCCGCCTTATGGCCCCGAAGGGGACAGAGGGTACGGTGCCGGCAGCGAGTACCGCTACGGCGGCTACGGGtaccgcggcgcggcgccgggcgcggccacgccgccgccgcagccgccCTACCCCGACTACTACCGCGCGCCGCATCCGCAGCATCCGCACCCGCACCCGCAGCACCCGCAGCACCCGCCGCATCCCCACCCGCAGCACCAACACCCGCCGCATCCGCAGCATCCGCCGCATCCGCAACACCCGCAGCACCCGCAGCACCCGCAGCACccgcagccgccgcccgccCAGCACGAGATGTCGGGCGGCGGAGGTAGCATAATGAACTCGCAGCTCGCGCGCCAGCTGGtggcgccgctgccggccgcgccgcgcgcctacGGACCCTACGGCGGCGGCAAACCCTTGGGccccgcgggcgcggcggcggcggcggcggcggcggcggcggcgggtgcGGGCGCGCCGCGGCGGCACCCCGACTTCGCGAAGGCGGACGCGTACGCGGCGCccggcgcgcccgccgcgcagcGCTTCCCCGGCGCGTGGCCCGGCGCCTTCCCGCGCGCgcagccgcccgcgccgcagccCGCCTGGCGGCCCTCGCAGCAGCAGCCCTGGCCCGCGCAGCCCTACCCGCCGCAGGGCCAGGCAGGGGCGGCGTGGGGCGgtgcgccgcggccgccggcggAGGCCTGCCCGCCCGGCGTCGCGCCCTCGCCCGGTCCCCCTAACATGAGCCTGGGCGGCGGGCAGCTGAAGCGCGAGATGACGTTCCCCGCGGAGTGCGTGGAGGCGACCGCGCCCGCCGGCGACAAGCGACGGCGGCTCACCAAGGCCGACGTCGCGCCCGTGGACGCGTGGCGCGTCGTCATGGCACTCAAGTCCGGCCTGCTCGCCGAGACCTGCTGGGCGCTCGACATCCTCAACATCCTGCTGTTCGACGACAACTGCATAGGGTACTTCGGGCTGCAGCACATGCCCGGCCTGCTCGACCTGCTGTTGGAGCACTTCCACCGCGGGCTGGCGGAGGTGTtcgacgcgccgccgccgcccgccgcgtcgTGGTACGCGGCGCCCGGGCGGGCCGCGGAGCCCgaggcgccggccgccgcgcccgcgccgcccgaccCGAGCGACCGCGTGCGCGTGCTGGCCGGCGAGAACTACACGctcgccgcgcgtcgccgccgGGCGCACGTGGCCTACCGCGCCGAGcccgacgccgccgccgccgacctgtTCGCGCCCGAGCCGCCCGACGAGCCCGAGGACCGCCACGACTCGCTCGAGCCCTGGCAGCTGGCCGACCACGTCATGCCCTGCTTCCGCGCCGAGTTCCTGTCGCTGCCCTTCGTGCGCGTGCTACCCGGCGAGTGCGCGCCCGAGCCGCCCGCGCCCGAACCGCGCGCGCCcgagcccgcgccgcccgaGCCCGCGGAGGAGCCGGCGCCGCCCGAGCCCGCGCGCCACGCGGAGGACCGCGACAACCTGGAGGCCGAGCCCATGGAGCTGGAGGTCGAGCGGCGCGTCGCGCTCGCCGTGCGCGACCCCGCCGGCGTGCTCAAGCGGCGGCGCCTCGAGGACCACGAGGACGAGTGCTACACGCGCGACGAGCCCAGCCTCAACCTCGTCAGCGAGAGCAGGGACGCGCTCGCCAAGCGCTGCATCGCGCTCTCCAACATCCTGCGCGGGCTGACGTTCGTGCCGGGCAACGAGGCGGAGTTCTCGCGGTCGGGCGCGTTCCTCGCGCTGGCCGGCAAGCTGCTGCTGCTGCACCACGAGCACGCgccgcgggcagcgcgcgcgcgcgcctacgagcgcgccgcgcgggacgACGCCGACCAGGACGCGTGCTGCTCGTCGCTGCGCGGCGAGGGCGAGTGGTGGTGGGACGCGCTGGCGCAGCTGCGCGAGGACGCGCTCGTGGCGTGCGCCAACATCGCCGGCTCGGTGGAGCTGCAGCACCAGCCGGAGGCGGTGGCGCGGCCGCTGCTGGACGGGCTGCTGCACTGGGCCGTGTGTCcggcggcggtggcgggcgacgcgccgccggccgcggcGCCCGGCTCGCCGCTGTCGCCGCGGCGGCTGGCGCTGGAGGCGCTGTGCAAGCTGTGCGTGACGGACGCGAACGTGGACCTGGTGCTGGCCACGCCGCCGCGCGGGCGCATCGCGGCGCTGTGCGCGGGGCTGGCGCGCGACCTGTGCCGGCCGGAGCGGCCGGTGGTGCGCGAGTTCGCGGTGAACCTGCTGCACTAcctggcgggcgcgggcggcgcggcggcgcgcgaggtGGCGCTGCAGGCGCCGGCCGTGGCGCAGCTGGTGGCGTTCATCGAGCGCGCGGAGCAGACGGCGCTGGGCGTGGCCAACCAGCACGGCGTGGCGGCGCTGCGCGACAACCCGGACGCCATGGGCACGTCGCTGGACATGCtgcggcgcgcggccgccacGCTGCTGCGGCTGGCGGAGCACGCGGAGAACCGGCCGCTGATCCGGCGGCACGAGCGGCGGCTGCTGTCGCTGGTCATGTCGCAGATCCTCGACCAGAAGGTGGCGCACGAGCTGGCGGACGTGCTGTACCACTGTAGCCAGCCGCGGCCCGAGGGCGCGCCGTCGccgtcgccggcgccggcgccggcgctggcGCTGGCGCCCGTCCTCGAACAATAG
Protein Sequence
MLSSPHSRSRRRAARRPGSAPSLTFRLISARNIRTLRTAVYVQSCSSRSVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAYECHFDRGGIDPQPIINQVEASTKKKGGKSNTTPSAGSSNSQESFPPSGGGAGALAGAGAGAGAGAGAAMEAYPAQYPPYPPQPNTSQGGGPAGDNLAASNPFDEPPGPRRPPGYQPGYGYEYGSPYQATRPVYPPYGPEGDRGYGAGSEYRYGGYGYRGAAPGAATPPPQPPYPDYYRAPHPQHPHPHPQHPQHPPHPHPQHQHPPHPQHPPHPQHPQHPQHPQHPQPPPAQHEMSGGGGSIMNSQLARQLVAPLPAAPRAYGPYGGGKPLGPAGAAAAAAAAAAAGAGAPRRHPDFAKADAYAAPGAPAAQRFPGAWPGAFPRAQPPAPQPAWRPSQQQPWPAQPYPPQGQAGAAWGGAPRPPAEACPPGVAPSPGPPNMSLGGGQLKREMTFPAECVEATAPAGDKRRRLTKADVAPVDAWRVVMALKSGLLAETCWALDILNILLFDDNCIGYFGLQHMPGLLDLLLEHFHRGLAEVFDAPPPPAASWYAAPGRAAEPEAPAAAPAPPDPSDRVRVLAGENYTLAARRRRAHVAYRAEPDAAAADLFAPEPPDEPEDRHDSLEPWQLADHVMPCFRAEFLSLPFVRVLPGECAPEPPAPEPRAPEPAPPEPAEEPAPPEPARHAEDRDNLEAEPMELEVERRVALAVRDPAGVLKRRRLEDHEDECYTRDEPSLNLVSESRDALAKRCIALSNILRGLTFVPGNEAEFSRSGAFLALAGKLLLLHHEHAPRAARARAYERAARDDADQDACCSSLRGEGEWWWDALAQLREDALVACANIAGSVELQHQPEAVARPLLDGLLHWAVCPAAVAGDAPPAAAPGSPLSPRRLALEALCKLCVTDANVDLVLATPPRGRIAALCAGLARDLCRPERPVVREFAVNLLHYLAGAGGAAAREVALQAPAVAQLVAFIERAEQTALGVANQHGVAALRDNPDAMGTSLDMLRRAAATLLRLAEHAENRPLIRRHERRLLSLVMSQILDQKVAHELADVLYHCSQPRPEGAPSPSPAPAPALALAPVLEQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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