Basic Information

Gene Symbol
osa
Assembly
GCA_947049265.1
Location
CAMRIQ010000101.1:549001-567414[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 9 4e+04 -4.0 0.1 71 88 88 105 73 105 0.74
2 2 8.8e-13 3.9e-09 37.9 0.0 2 48 404 450 403 465 0.90

Sequence Information

Coding Sequence
ATGAAGAACGCGCTGGAGCGCCGAGCGAGTGAGCCGGCCGGAGCACGGCAAAAACATCGGCGCGGTTATCGCggccccgccgcccgcgcccctgCCCGCCCCGCGGCGCTGCGCCCCTGGGACCGGACTCGTCTGATCGACGCCGGCCGGAGCCTCGCAGCGAGGCGGACTAACCTCGACGAACGCAGGCGGCGTGGGGTCGCGGCTCGGCTCGACTCGACTTACTCGTGCGCCTCCTTCACTTCGAACGCTCTTCGTAGAGCTGACATTATAACATTACTTCGTTATAACTTCAAAGCGTATTTATGCGCGTACATGTTTACTGCCGATCTGACCGGTCAGAACAGCAATGACTCGGGCGGCAGCGGAGGCGCGGGGCGCGCTTCGACGCCGCACCTGAGGCCGACGCCCAGCCCCACCGGCTCCAGCGGATCCCGCTCCATGTCACCGGCTGTCGGTACGCAGAACGTACCGATGCCGCCGCGGCCGTCGTCTTCCCTGTCGGACGGCAGCGGGCCGACGTCGCGccccggcggcggcgcggcgcccgggCCGGCGCCCAGCGCCGTGCCGCCGCCCGGCGCCATGGTGGCGCAGCCCTACGGCCACCACGGCTACAAGCCCTACCCGCCGCAGCCCTACGGCTACCCGCCGAGGAACCACCACCCTTACCAGTACGGCTACCGGCCGCAGCCGCCGCACCCGCAGCACGCGCCGCCGCATCCACCGCAACACTACCCCCCGCTCAAACAGCAGCCGCGGCACATGGGTCCGCCGGGCGCGggtgcgggcgcgggcgcgggcgcgggcgcggagggcGCCATGCCGCCGCCCACGGCGCCGGGCGACGCGCACGACAAcgggcccgcgccgcccgccacgGCGCTCGTCACCACCGGGCCCGACGGCGCGCCGCTCGACGAGGGCAGCCAGCAGAGCACGCTCAGCAACGCCTCCGCAGCGAGTGGCGAGGAGCCGATCGGCACGCCGAAGCCGCGCAAGGACTTCGGGCCGGGCAGCGCGGCGCCCTCGCCGTCCCCGGGCGGCGGCAGCCACTCCTCCGCGCACGACGACTACGACGCCTCGCCCTCCTCCTGGCCGCGCCCGCCCTCTAGTCCCGTGTTTAACAGTCACATACAGCCGGAGTCCTACAGATCAAAGAAGTCGGACTCGCTGGGCAAGCTGTACGAGATGGACGACGCGCCCGAGCGGCGCGGCTGGGTGGAGCGGCTGCTGGCCTTCATGGAGGAGCGGCGCACGCCCATCGCCGCCTGCCCCACCATCTCCAAGCAGCCGCTCGACCTCTACCGCCTGTACCTGCTCGTGCGCGACCGCGGCGGCTTCGTCGAGGAGCAGGGCGACGAGCGGAAATTCATGTATATGATGATTTATGAATGCTCATCGCCTTGCTGTCCGGTGGTGTCCAGGCCGCGACCTTAG
Protein Sequence
MKNALERRASEPAGARQKHRRGYRGPAARAPARPAALRPWDRTRLIDAGRSLAARRTNLDERRRRGVAARLDSTYSCASFTSNALRRADIITLLRYNFKAYLCAYMFTADLTGQNSNDSGGSGGAGRASTPHLRPTPSPTGSSGSRSMSPAVGTQNVPMPPRPSSSLSDGSGPTSRPGGGAAPGPAPSAVPPPGAMVAQPYGHHGYKPYPPQPYGYPPRNHHPYQYGYRPQPPHPQHAPPHPPQHYPPLKQQPRHMGPPGAGAGAGAGAGAEGAMPPPTAPGDAHDNGPAPPATALVTTGPDGAPLDEGSQQSTLSNASAASGEEPIGTPKPRKDFGPGSAAPSPSPGGGSHSSAHDDYDASPSSWPRPPSSPVFNSHIQPESYRSKKSDSLGKLYEMDDAPERRGWVERLLAFMEERRTPIAACPTISKQPLDLYRLYLLVRDRGGFVEEQGDERKFMYMMIYECSSPCCPVVSRPRP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-