Basic Information

Gene Symbol
XBP1
Assembly
GCA_947049265.1
Location
CAMRIQ010000265.1:349583-353142[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 6.4 1.1e+04 -2.3 0.1 16 25 29 38 27 39 0.73
2 3 1.8e-16 3e-13 50.7 12.0 2 63 43 104 43 106 0.94
3 3 0.00015 0.26 12.5 0.9 33 55 88 110 87 113 0.92

Sequence Information

Coding Sequence
ATGAGTGCTCCGATAATCATCACGGTGCCGAACAACTATCTGGCGGTGGATGAAGACCAGAAGGTGGTCCTGGCGCCGGCGTCTCCCGCCCCGTCGCGGAAGCGCCGGCTCGACCACCTGTCTTGGGAGGAGAAGATGCAAAGAAAAAAACTGAAGAACCGCGTGGCGGCGCAAACCTCCCGCGACAGGAAAAAGGCCAAAATGGATGAGATGGATGCCAAGCTTCAGGAGTTCATTGATAGGAATGAGCGGCTGAtcagtgagGTGGAAAGCCTCAAGGCGTTGAACGAGCGTTTGTTGAGCGAGAACGCAGCGCTGCGCGCGGAGCGCAGTGTCGCGGGGGCCCGGGGACCGGCAGAGTCTACTCCTCGGCGGCAGGAGGGGCCCCCCCAGGCactgcgcgcggcgcgcctgcTGCTGGCGATGTGTCTCCTCTCGCAGACCTCCTCCAGCACCTCGAGTCTGAAGAGTACCTCGACACCCTGCAGCAACTGGCAGACTCCCTCCTCCAGGAGATTGATGCAGGCTGTGCAGGAGCGGCTCAAGATGTCCCAGTGCGGGACACTGGAGAGCGCGCTAAAGGAGCTGAAGTGGTGGGGCCCGCACCAGAGCACCTGGAACCCAGTGAAGATGGAGTCCTAG
Protein Sequence
MSAPIIITVPNNYLAVDEDQKVVLAPASPAPSRKRRLDHLSWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMDAKLQEFIDRNERLISEVESLKALNERLLSENAALRAERSVAGARGPAESTPRRQEGPPQALRAARLLLAMCLLSQTSSSTSSLKSTSTPCSNWQTPSSRRLMQAVQERLKMSQCGTLESALKELKWWGPHQSTWNPVKMES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01019964;
90% Identity
iTF_00656883;
80% Identity
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