Basic Information

Insect: Epicampocera succincta
Gene Symbol: -
Assembly: GCA_932527255.1
Location: CAKOBP010000006.1:1152268-1157459[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0013 0.083 13.5 1.0 1 23 119 141 119 141 0.98

2 15 2.1 1.3e+02 3.4 2.4 1 23 147 170 147 170 0.95

3 15 0.00038 0.025 15.1 0.8 2 23 371 392 370 392 0.97

4 15 1.2 78 4.1 3.3 1 23 443 466 443 466 0.94

5 15 2.1 1.4e+02 3.4 1.6 2 23 529 550 528 550 0.95

6 15 0.031 2 9.2 1.8 3 23 715 735 714 735 0.97

7 15 0.014 0.88 10.3 3.4 1 23 741 764 741 764 0.96

8 15 2.2 1.4e+02 3.3 1.3 1 23 798 821 798 821 0.93

9 15 0.0034 0.22 12.2 0.3 1 23 829 852 829 852 0.96

10 15 0.052 3.4 8.4 1.7 1 21 978 998 978 999 0.93

11 15 0.02 1.3 9.7 8.5 1 23 1016 1038 1016 1038 0.98

12 15 9e-05 0.0059 17.1 0.5 1 23 1043 1065 1043 1065 0.94

13 15 0.0022 0.15 12.7 7.4 1 23 1071 1094 1071 1094 0.94

14 15 0.03 2 9.2 1.7 1 20 1099 1120 1099 1123 0.90

15 15 0.0035 0.23 12.1 4.1 1 19 1129 1147 1129 1152 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0013	0.083	13.5	1.0	1	23	119	141	119	141	0.98
2	15	2.1	1.3e+02	3.4	2.4	1	23	147	170	147	170	0.95
3	15	0.00038	0.025	15.1	0.8	2	23	371	392	370	392	0.97
4	15	1.2	78	4.1	3.3	1	23	443	466	443	466	0.94
5	15	2.1	1.4e+02	3.4	1.6	2	23	529	550	528	550	0.95
6	15	0.031	2	9.2	1.8	3	23	715	735	714	735	0.97
7	15	0.014	0.88	10.3	3.4	1	23	741	764	741	764	0.96
8	15	2.2	1.4e+02	3.3	1.3	1	23	798	821	798	821	0.93
9	15	0.0034	0.22	12.2	0.3	1	23	829	852	829	852	0.96
10	15	0.052	3.4	8.4	1.7	1	21	978	998	978	999	0.93
11	15	0.02	1.3	9.7	8.5	1	23	1016	1038	1016	1038	0.98
12	15	9e-05	0.0059	17.1	0.5	1	23	1043	1065	1043	1065	0.94
13	15	0.0022	0.15	12.7	7.4	1	23	1071	1094	1071	1094	0.94
14	15	0.03	2	9.2	1.7	1	20	1099	1120	1099	1123	0.90
15	15	0.0035	0.23	12.1	4.1	1	19	1129	1147	1129	1152	0.91

Sequence Information

Coding Sequence: ATGAACGGCAAAAAACAGGATGTGGATTACAGTTCAGTGTGTAGGACATGTCTGCAGTCGAATGTGGAGATGCTATTTTTAGGCGCGCTTATTAAGGATAACTTTAAAGGTAAAAGCTCTAAAATGTCCTACCTGGAATGCTTGAAAATGTGCATTCCCTTGGAAGAAACACCGGATATTAAAATGCCGCAAAGTATATGTTTAGACTGTGCATCGGCTTTACGTGTGTCATATTGGTTTATGAAAAATGCAATGCGGGCTCAGGATCTGTTGAAACTGAAGTTAACAGACATTAAACGAAGAAAAGAGCGGCACGAAATGGAGATGTCCGCCGATGTTACGAAACCTAAAAGATATCGTTGCAAAATTTGCAATGTAAAGGTTGAAACCAAACGATCCCTTAAGGACCATGTGAAGCTGCATTTAGATATTATTGTTTATAATTGTCAACTTTGTTCCTTTGAAAGCCATAATCGAAATAGTTTAACCGAGCACTACATGCAAATTCACGCCGTTGAACCAACTAGAGAACAATTGAAACCAACAACAAAGTTGGCGTCGTTAAACCCATCTTCAACAAAATGTGCCAGTTATGAGCGTGAGGACGGGGCAATTAAAAGCGATCATTTCCAAGTACTACCCGAAGAAACTTCACAAATTTCTTATGAAGAACTTGTAAAGAATTCACCGTGTGATGTTGGTTGTCTGCCGGTTTCCAATTACAATGCAATAGATGCATCTTTCAACACTATCGGTGAAGAAATAAAAAGTGATCTGAACATAGCAAACGAGTTTATGGTCACGGCAGACGGGAGGTTAGAGAAAGTTGTAAATAAAGGCGTTGTTATAGAATACATAGATGCTCAAAATAATAGCAGCAACCTTACACTGGACAATGGTCTAGTATTAGAAAATATAATGCAAGTTCAAAGCATAGACAATTCGCTAATGCTGGCGCAAGATAATGATATTGGGCAAATGGACGTTGATGACTTAATCATTGAAGACCCGGCCGAAGCTTTAGAAGAATCTCGTGTTGAAGAGAATATTGCACTACCACTACAGGAGGAACTACTACCAGCGACTATTATTCAACAACCCAAGAAGATAATGTGTAAAATTTGCACTAGAGATTTTCTGACGCAGGAACAATTAAAAAATCATATGTTAACACACAATGAAATTCCACACTTTTTCTGCGATCAGTGCAAGTTTTATACTTTCTTCAAAATTGATCTACACCAACACTACAAAAGTAAGCACAATTTGCAACCGACTAGCAAACAATTACAACCAAAAAACAAACAGAAGACGCTTAGCGAATACTACGCATGTGATTTGTGTTTTTATGAATGTGAGACCAAGTTCGACATCAAAAAGCATTACAAAGCGAAACACAATATAGAGGCGAATGAAATACACTTGAGACCTACTAAAGTCGAAAGAATAAAATCGAAGTTTTCTGCTCTTACTGCAAAGGCAAGAGCAGCTGCAACTGTGAGCACGCCGACAAGAACAGAGACAATGAAAAATGTTAAAAGTCATTCCCCTAAGGCGCCAACACCTGATTATCTCAATGGATTGAATTGCCGCAAATGCCAAAAACTCTTTTACTGGCGCAATGAACTTTATGAACATTACAAAATGCACAGTGCTGAAGAAGCGGCTCTTAAGCAGTCAAAACAAACAGTAAAAGTACAAAGTAAGCCGACTTCTTCGAATCCCAGCCCAAATAAATCCAAAGATACTCACCACCAATTGGGCGCAACAAATTCTTCAAAATTTACCAGCCTCGAAACGTTGACTTTAAGTGTATCTGCAGCCAATGGTAGTGCACTCAATTCAGTAGCTCCACTGACGCCTTCTTCAAGTTCGACTTATACCTTGCCTTCTGATGCGGTGCCGCAGATTGTGGAAACTGATCAAACTGTAGAAAATGTAATGGACTTCGATTTCAATTGTGACGATGATGCATTGTTCGAAGATTTTGATGACGATGTAGACGTAGAGAATAATTCCGATGAAAGTTATGCAGAGTCTCGCAACGTACTGCTAACCTCCGATGATGACTTTGAAGACATGATGCAGACTCAAAACAACGTCAACAATAATTCGTCCAGTCTAGTCACAAGTGCACCGTTTTGCGTGCATTGTCAAAAGCCATTTTTAAGTCAATATCAATATGAAAATCATATGTTTGTTCACCGGGGGCTGGCTCCGTACCGTTGCGAAATGTGTACAAATATGTACAATACTAAACGTTGTTTGATTCGTCATTACAAAGCCGTGCACAAATATGTACCTACTAGAGATATGATTCAAGCTAAGGGCGATAAAGTGTGCGACGATAAAATCTCTATTGAAAATTTAAAACTTGAACCAACCACTTGTTTTATGTGCGGAAAGTGTCCCTACGAATCTTCAGATTTGAATACTCTTAATTGCCATATAACATCAAGTCATAACATAGAAGATGAATTGCCTTTTGAATGCCCGCGCTGCATACGGTCATTTGCAACTAAAATTATGCTATTGAGGCACTTAGAACGGAATCATAGTTTGACGCCAATTAACCAGCGTCAGGATCTGTTCGATAGTGCGAAAGCTACATCGCCCATAGCAACGACTACATCGGTTACATCAACTGCCACAACCGTAAATAACCATTTAAATATGATGAAAACAGAAACCATAGAAACAAACGCAAGTTGCGGATACAGTGATCTATTCCTGGCCAAAGAACAACGGCAGGAACACCGAATCATCTGCTCAGATGCCGTAGCACAGCATACTGTTAGGACCGCCTTCGAAGAACCCACCAGCCCAACGCAACATTTGGCTAACAATGAAAGCTCTACCAACAGAAATGAACCTGCCGCAATCCCCATCATTCCAACTGCCCTAGACGAGAACGATGAAGGCCAACCGCTTTTTAAGTGTAAAATATGTTCTTTGACTTGTTACGATCTCGCAAACTTCAATGAACATGGCAAACGTATTGAATGCCGTAAAATAAATGTTTCTAGTGCTGGCGACAAAATGTTGTTTGAGTGTGAAATTTGCCACTGCAATTATAAGACAATGTACCTATTAAAGCACCATTTGAAGCGTCATATCGGCAGAAAATTTCTGTGCGCCGATTGCCCAAAAAGCTTTGTAAACCAAATCGAATTAAAAGCCCACAAACATGTGCACAGCGGAGAGAGACCCCATAAATGTGACGTGTGTACGAAATCATTTCGTTACGTTCACCACCTGAAGCGTCACAAAGACAGCGTGCACTATGGCAAACGGCATACCTGCACCGAGCCAAATTGTAGTCGCAACTTTACAACGCTGACTCAGCTAAAATTGCATTTGTGGACTCATAATGGCATTGTGCCATACAAATGCCCCCACTGTAACCGTGTATTTAAAAAGAGACTACTTTTGCGTGAGCACTGTGCTAAAATCCATTATGTAAATTTAAGCGAAGAGGAAATGGCGAAAATATTTCGGAATAGTTTAGGATATACGAATCCTCATGACTTCACCGTTAGAATTGGCAATGGCAAAATGTTACGGCGCGGCGACTTGGAATCCATGGGTGCTTCAGGCGTAATCAAATGTTCATTTAAATAG
Protein Sequence: MNGKKQDVDYSSVCRTCLQSNVEMLFLGALIKDNFKGKSSKMSYLECLKMCIPLEETPDIKMPQSICLDCASALRVSYWFMKNAMRAQDLLKLKLTDIKRRKERHEMEMSADVTKPKRYRCKICNVKVETKRSLKDHVKLHLDIIVYNCQLCSFESHNRNSLTEHYMQIHAVEPTREQLKPTTKLASLNPSSTKCASYEREDGAIKSDHFQVLPEETSQISYEELVKNSPCDVGCLPVSNYNAIDASFNTIGEEIKSDLNIANEFMVTADGRLEKVVNKGVVIEYIDAQNNSSNLTLDNGLVLENIMQVQSIDNSLMLAQDNDIGQMDVDDLIIEDPAEALEESRVEENIALPLQEELLPATIIQQPKKIMCKICTRDFLTQEQLKNHMLTHNEIPHFFCDQCKFYTFFKIDLHQHYKSKHNLQPTSKQLQPKNKQKTLSEYYACDLCFYECETKFDIKKHYKAKHNIEANEIHLRPTKVERIKSKFSALTAKARAAATVSTPTRTETMKNVKSHSPKAPTPDYLNGLNCRKCQKLFYWRNELYEHYKMHSAEEAALKQSKQTVKVQSKPTSSNPSPNKSKDTHHQLGATNSSKFTSLETLTLSVSAANGSALNSVAPLTPSSSSTYTLPSDAVPQIVETDQTVENVMDFDFNCDDDALFEDFDDDVDVENNSDESYAESRNVLLTSDDDFEDMMQTQNNVNNNSSSLVTSAPFCVHCQKPFLSQYQYENHMFVHRGLAPYRCEMCTNMYNTKRCLIRHYKAVHKYVPTRDMIQAKGDKVCDDKISIENLKLEPTTCFMCGKCPYESSDLNTLNCHITSSHNIEDELPFECPRCIRSFATKIMLLRHLERNHSLTPINQRQDLFDSAKATSPIATTTSVTSTATTVNNHLNMMKTETIETNASCGYSDLFLAKEQRQEHRIICSDAVAQHTVRTAFEEPTSPTQHLANNESSTNRNEPAAIPIIPTALDENDEGQPLFKCKICSLTCYDLANFNEHGKRIECRKINVSSAGDKMLFECEICHCNYKTMYLLKHHLKRHIGRKFLCADCPKSFVNQIELKAHKHVHSGERPHKCDVCTKSFRYVHHLKRHKDSVHYGKRHTCTEPNCSRNFTTLTQLKLHLWTHNGIVPYKCPHCNRVFKKRLLLREHCAKIHYVNLSEEEMAKIFRNSLGYTNPHDFTVRIGNGKMLRRGDLESMGASGVIKCSFK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -