Esuc013712.1
Basic Information
- Insect
- Epicampocera succincta
- Gene Symbol
- -
- Assembly
- GCA_932527255.1
- Location
- CAKOBP010000065.1:1717957-1725542[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 0.0054 0.35 11.5 0.1 1 20 1298 1317 1298 1322 0.92 2 8 0.022 1.4 9.6 2.5 1 23 1833 1856 1833 1856 0.96 3 8 5.5e-06 0.00036 20.9 4.0 2 23 1875 1896 1875 1896 0.97 4 8 0.0011 0.071 13.7 2.5 1 23 1902 1924 1902 1924 0.98 5 8 3.6e-06 0.00023 21.5 0.5 1 23 1930 1952 1930 1952 0.99 6 8 0.003 0.19 12.3 2.1 1 23 1958 1980 1958 1980 0.98 7 8 0.065 4.2 8.1 0.0 2 23 1987 2008 1986 2008 0.96 8 8 0.0019 0.12 13.0 3.2 1 23 2014 2036 2014 2037 0.96
Sequence Information
- Coding Sequence
- ATGTGGGAAATTGATTTACAGCGAAGTGGTAGTGGCAGCTCATCTTTTGGTGGAGAGCAACAACAACCTCTTTCTCAGATACCGGATCATTTAAAATGTGGCGAGCTTTATACTTGGCTGTGCGCCGGTGAACTGTATGCTGTGGAATGTCATTTGTGTGACGATCATCCGTTGTGCCCGCTGTCAGAATTTCCCCAACACATGGATATTTGGCACACAGAGTGGCAGGAAATGTTCCCGAAAACTCACGGATGCGCAAGTTTCATTGAAGAAGAACTTCAATTTCTTAAGGAAATTAATGCGGACAATTTGACTTTGACCACCGAAGACAGTGGTCTGTTTGAAACAGACGATCAATCATGCAGCGCTAGAGAGGCCAAAATACAAGCAGAATTTGAAGAAATTCCAGAACCTTTTGAACAGGTATTAATCGAACAAGATGTGGCCGTTGATTCAACAATACAAATTAGCGAAGAACTGAACGAAGAGGAATATTTTAATGCCGTAAATGAAGCAGCAGCAGCGGCAGCAGCGACGGGACGACAATTTCCAATTGGAAACTGGCAACAACAAACGCAAACTTTCGCTAAACAAAACTTAACATTGGCCAATAGAGAACCAGCACAAGAGCACTTAACAGTTAAAGAGAGTACCGGATTAAGCCTCTTAACAGACTGGGGAAAGAGTAGATTAAAAGGTGGCTTAAGCCCAGCAGAAACTTTTGTAAATAAACAACAACATTTAAATGAGAAGATACGAATTAAACAACAACATGATGAGAATATTGAAAATGACAGAGAATCGGAAACAAGTGGAAGTGGAACAAATTACAAAGACAAAATTACGGAAACAGACGTAGAAACTAAAAGCACAAAACAAAATGGAAATGAAACATTAGGACAATCAAAATGTAGTGAAAATTTTGCAGAATGCCAAGAAGTCAATTCAAAATCAAGTAAAAATATAGCAAAAATTAATGAAAGCAAAAAAGGAATGAATTTGAATATGAAACAAACTTCTTCTTTGGCAAATGAAGAAGAACCAAAAGAAAATAAAGGCGAGACTTATAAAAGTGAAACATATCTAAAAGAAAACGAAGTAGAAATGAATAAAAATGAAAAAGAATTACAAAAAAATGAAATGGAACAAAATGTAAATGCAGGGAAACAAATCGAAAATGAAATGGAACAAAGCGAAATAGAAACAAAACTAATTGAAAACCAAAAGAAAGAATATGAAAATACACCAAGAAATATTAAAAATAAAATAGATTTAATGAAAAAACAAAAATCCAACGGAATAGAGCAAAATTTAAAGCGAATAGAAACAATTGAAAGTGAGACAAGTTTTATGATAACAAACTGCCCGGAGATAGAAGCAAACGCCGAGAAATATCTGACAAAAAACCGGACCTGTAAATTAAAGAAGGGCGAAACAAAAACAAACGGAAATGAAAAAAATCTAACAAAACTTAATTTTTGGGAAAAAGGAGAGGACAAAAATGAGAAATCATTGAATGAAATCAAATCACAAAGTGACGATCATTTCGAGGAAACAACTAGAAATGAGACAAATGATACACTCTGCATAGAATGTCTGCGAACGTCTCCACAGACGAGACGTAAAACGGGCAAATATTCAAAAAGGATGTTGCGACTTAAATCTGACGTCTCTCAAGCAGGAACAAATGAAAGTGAAAAATTAGCAACCAGTTTCGCAGTTTCTCAAGTTACAGGAACAAACGAAAACGAAACACTTAATAAAACCATTAGGCAAAGCAGTAGAAAATCTCAAAGAACAGTAGAACATTTAATGAAAATGAAAGCAATAAAACAAATTAAAGCAAAGGATAAAGGAACAAATGGAAGTGAAACACTTAAACATGGCAAGATTTTGCAATTAAATGAAAATGAAACATTATTAAAAGAACTGCGGTCAGGAACTTCATCAATAGCAAATGAAATAAATTGTGAAATTTCTCTTGGAGCCGAAATTGCGCAAGGAATATGTGAAAATGAAACAGAGCAAGTTGTTTGTAGCCAAGAAACTCGTAAAATTGAATTATTTGAAAATAACGTTAATGAACATAGAACTAAAAATGAAATGGAATATTTGGGACAACCACGAACAAATTTGGAAAATGGAATAAATGAAAGTGATGTGTTATCAAGTGCAATCACAACCGAAACGAATGAAAATGAAACATTAGTTGAGCATAATAATAAAAGCAAATCATTTGCAAATGTGAAGGCAACACCTGGAAGTGAATCATTGTTGCAAAATATTCGTAAATCTTTAAGAAATATAAGAAATAATGGAAAATATCTAGAGCATTCCATGCAGAGCGACAAAATAGAGAAAGCAGATGGAAATGAAACACCTCAGCTTGGAAAGGAAGATTTAAATCAGTTTTTCAGCCACCCTGAGAACGCAATGGAACTGAAGCAATTCAAAGCTAATGATCTTAAAAGCCCGAAGAAAGAGGAAGAGCTTGAAATAAATGAGCACCACGCTTGCGCGAAAGATAGAGTACTTAAAACAGATGCCCCCACAAGTTGCAAAAAAGACCTTAAACAGTTCGGCAAAGATAAGCCAGCAAAAAATGAGCTTGAAAGAAGATTTGGCAAGTCTAAAAATCTGTCCAGTACTAAACAAAATCGGTATCTTTCAAGAAGAAACTTCATAAGAAAAAATCTAAGATCAAACAAAAGCAAGCAAGAAAGTCAACAGGTTTTAGGAAACCTAACAAAACTCCGCAGAAAATATAGCGGACGGCATCTTTATCAGGCAGCTAAACCAAGAGATCGCGGCAGCGATTCTGTGGCAAATTCGGTGATATATGGGAAAAACCCGCACTACACAGAGTTAAAAGAAACGTCAGTGTTGGGCTTAACAACAGAAAAGGAGCAGGAGGAAACAAACTCTTTCCCAAGTGACATCACAGTTTCTAAAGAAATCTCTATTTCAGAGAAAGAGAGCAACCAGAGAACTGCTGTAGAGCAAAGAAACCTAATAGAAGTTTGCCAAGCAGAAGAGACTAGTGCCGAAGGAGAAAACAGCGCTTCAGCGAAAGAGAGTGATGAAGTAAATGCCGCCAAACAAACAGACTTCAAAACAGTTTGCCTAGAAAATAAAGCAACAACAGCAGCGCTCAGTTCTTCCGGCGACCATAATGCCCCAATTGCGTATGCAACGCCTCTTTCTCCACTCTCGCCCAAGACCGAAGAAGAACATTTCGAGTTTTATGAACCTAAGAAAAAGCTACACAAAAAACATATTAGTCGTTTGATCCAGCTCTACCACGGACACCCGCGCTTGTGGGATCAATCACACCCCGACTTCTGTGAACCACAAATGTGCCGCACATCGTGGCAGCAAATCACCGAGGAATGGAACAAATACTGCCAGAGAAAATTTACCATAGCTGAGGTGCGCATACGAGTTTGTACACTTTGCCAACGTTTTGTGCAGGAAAAGGACCGCTTGGCCCTGGAGGGCGAACTGGACGAGTGCGCCAAATTTCCCTACTACGAGCAAATGAAATTTTTGGAGCACCAAAAATCTTTGCGCAAACGGCGCGAACTTTACGAGCAACAAAATGAGAAAATATTGGAGATCTATCAGTATTTTCCCATACTGTGGCACGTGCGGCACTACAAATCCCGGCAGGCCAAAAGAAGGGCTGAAGCCTTTGAGAGCATCAGTAAAGTTTTGAAGTTATTCGGTTTGCATTTGTCTTCTCTGGGGGTACAGAAGCGAATACGTTCTTTGCGTAAATGCTATCGTTTGGAGAAAATACGTCACCTGCATGCTCAGGTGGAGCAGACCGCCTTTAATGCAGAATTTCGCCACTACGAGCGAATGCAATTTCTGGACAAACACATCGACCCGTTTGTGTGTCGTATATGCGGAAAGATTTTCGAGAACTTGCAGGGTTTCCGTGAACATCTGGACGCTGAAAATCACGGTAGTATTTTGCAACAGGAGACAGATAATGACAATGTTTTGGATGGAGATGAGCCGGAAGAGAATACAGCAGATGGTAAGGAGTTTGCCGCAGCCTGTGGCCAAACGGAATATTTTACAGAATCTGAAAATTCGACAGATATTTTGCAAAGATTTACGCCTTTTTGCGTAACGCCAGCGACTCCGACAGAGAATAATTATGCCCAGAGCCTGGACCACTTCCCGCTGACTACTGCCAAGGAACCATCATTAATCAATTCTTGGCACTATGAAGATCAGCTTATTGAGCAAATCATGGAAAATGTTAACAATAATGACAGTTTTAGTCAGCACGGTTTGGATGAGTTTATTACTTCTGTCACAAGTTGTGAAGAGCTGACTAACGGCAATAGCCTATTTGAAGAAGTCTTAACTCCCAGTCTTCTACATGCAGAGAACTCCTTCATTGTCGAACATCCGGATATAATAAGTGGGCAGAATTGTTCTCTCCTCAGTCCACTTACAAATGCTGAAAGTTTGATATCCGTTGATTTTGGCACTGAAAATTCTTTGACTGTTGAACATTCGGATTTAATGACAGATCACCATTTTAGTGTTCCACAGCCAGCGGAGGAAACTGTTGCAGTGGCAGCTGAGACAATTGCAGAAAAACAAGACGATCTGCAGCCAAGTGTCGAGTTGGCGAGCCCAACTAAAGAGCTGGAAAACCTAGTTACGGCAGAAGTTATTGTGGAAAAGCCCTCCTACTCTACGGCTCTTCTGGTAAAAGTTCAATGTGCTGACTATTCTGTGAATCTGAAATTAAATACAGAGCCTCTGACAAACCTAAATCCTAGTCAGCGAGATTCGGACAATGAATTAAATACATCGTGCGATAATTCTACTGCACCACTTCCCGATCTTTTAATACATAAAATGATCGAACTTTATCGTAAATTTCCACAACTTTGGGATCCCAATCATTTGGATTTTAATTCGCGAACTTTGAGGCGACAAGCCTGGGTTAAGTTGACAGCCGAATTTAACTCGATCGTTTGCAAACAATTGTCTTGGCGTACTTTGCATCGCAAATTAACCGATTACGCCAAATACTATAAGAAATTATTAACCGAACAGGGCAACTATGAAAACTTAGTAAATAAATGGGTGTTTTATGAGGATTTTAAATTTCTGGACGATGTGATTGCCGTTAACACAGAGCTGCAGCGCAGCGTCCATCACCGTGATAATAACTTTAAGATAATATCGACTTACAAGTCCTTCCCCCAGCTGTGGAATATTCAACATCCCGATTTCAGTAAACGCAGCTGCAAACAGCGCAATATTGAATTAATGTGCAATAAATTGCAAGAGGAAAACAATTTGCTATTGACCACAGAACGTCTCAAGAATCGCCTTATCGAGCTAAGAGCCCAATATAGATCGGCCAAAAAGCAGCGTTTAAAATGTGCCAAAAACCAGCAGAAATTTTCGGCCGCCGAGTTTGAATTCTATGAGGCTCTTAACTTTCTGGATGACCACATAGATCCGTTTGTCTGTGATAAATGCAGAATGGAGTTCAAGAAACTGACGGACTATAATCGGCATTCAAAAAAAGAGCATTCACCAAAAAAGCGTAATATTGTGCCACCGTCCGCCGAACCCGGCATGGAAAACGTTTGCCATATTTGTGGCATTAAGTTTACCACACGCAGCAATCTGTTACATCATATTAAACGTCACGAGGGCATAAGAAATTATGCCTGCACCATGTGTTCGAAAAGGTTTTACGCCTCTCATGCCCTAAAGGTTCACACAAGATCTCATACCAAGGAATGTCCATACACGTGTGAAAAATGCGGTATTTCGTTTGTCAGCGCCAGCAAATTAAACCAACACGTGAAACGACATTTGAATCAGAAAGACTTCGAGTGCAGTTATTGTCCCAAGACGTTTTTCACCGCCTTCGAAAAGGATCGTCATGAAAGGCGTCATCTCAACATACGTGACAAGGTGTGTCCAATTTGTGCCAAAACTTTTGTGGCCGGCTCTTCGTATTATGCCCATTTAATGCTGCACAGTGATACAAAACGTTTTGAGTGCGATAAGTGTGATATGAAATTTGCCCAATATCCGGGACTTTTCAAGCATAAAAAGAGACATCATACGTAA
- Protein Sequence
- MWEIDLQRSGSGSSSFGGEQQQPLSQIPDHLKCGELYTWLCAGELYAVECHLCDDHPLCPLSEFPQHMDIWHTEWQEMFPKTHGCASFIEEELQFLKEINADNLTLTTEDSGLFETDDQSCSAREAKIQAEFEEIPEPFEQVLIEQDVAVDSTIQISEELNEEEYFNAVNEAAAAAAATGRQFPIGNWQQQTQTFAKQNLTLANREPAQEHLTVKESTGLSLLTDWGKSRLKGGLSPAETFVNKQQHLNEKIRIKQQHDENIENDRESETSGSGTNYKDKITETDVETKSTKQNGNETLGQSKCSENFAECQEVNSKSSKNIAKINESKKGMNLNMKQTSSLANEEEPKENKGETYKSETYLKENEVEMNKNEKELQKNEMEQNVNAGKQIENEMEQSEIETKLIENQKKEYENTPRNIKNKIDLMKKQKSNGIEQNLKRIETIESETSFMITNCPEIEANAEKYLTKNRTCKLKKGETKTNGNEKNLTKLNFWEKGEDKNEKSLNEIKSQSDDHFEETTRNETNDTLCIECLRTSPQTRRKTGKYSKRMLRLKSDVSQAGTNESEKLATSFAVSQVTGTNENETLNKTIRQSSRKSQRTVEHLMKMKAIKQIKAKDKGTNGSETLKHGKILQLNENETLLKELRSGTSSIANEINCEISLGAEIAQGICENETEQVVCSQETRKIELFENNVNEHRTKNEMEYLGQPRTNLENGINESDVLSSAITTETNENETLVEHNNKSKSFANVKATPGSESLLQNIRKSLRNIRNNGKYLEHSMQSDKIEKADGNETPQLGKEDLNQFFSHPENAMELKQFKANDLKSPKKEEELEINEHHACAKDRVLKTDAPTSCKKDLKQFGKDKPAKNELERRFGKSKNLSSTKQNRYLSRRNFIRKNLRSNKSKQESQQVLGNLTKLRRKYSGRHLYQAAKPRDRGSDSVANSVIYGKNPHYTELKETSVLGLTTEKEQEETNSFPSDITVSKEISISEKESNQRTAVEQRNLIEVCQAEETSAEGENSASAKESDEVNAAKQTDFKTVCLENKATTAALSSSGDHNAPIAYATPLSPLSPKTEEEHFEFYEPKKKLHKKHISRLIQLYHGHPRLWDQSHPDFCEPQMCRTSWQQITEEWNKYCQRKFTIAEVRIRVCTLCQRFVQEKDRLALEGELDECAKFPYYEQMKFLEHQKSLRKRRELYEQQNEKILEIYQYFPILWHVRHYKSRQAKRRAEAFESISKVLKLFGLHLSSLGVQKRIRSLRKCYRLEKIRHLHAQVEQTAFNAEFRHYERMQFLDKHIDPFVCRICGKIFENLQGFREHLDAENHGSILQQETDNDNVLDGDEPEENTADGKEFAAACGQTEYFTESENSTDILQRFTPFCVTPATPTENNYAQSLDHFPLTTAKEPSLINSWHYEDQLIEQIMENVNNNDSFSQHGLDEFITSVTSCEELTNGNSLFEEVLTPSLLHAENSFIVEHPDIISGQNCSLLSPLTNAESLISVDFGTENSLTVEHSDLMTDHHFSVPQPAEETVAVAAETIAEKQDDLQPSVELASPTKELENLVTAEVIVEKPSYSTALLVKVQCADYSVNLKLNTEPLTNLNPSQRDSDNELNTSCDNSTAPLPDLLIHKMIELYRKFPQLWDPNHLDFNSRTLRRQAWVKLTAEFNSIVCKQLSWRTLHRKLTDYAKYYKKLLTEQGNYENLVNKWVFYEDFKFLDDVIAVNTELQRSVHHRDNNFKIISTYKSFPQLWNIQHPDFSKRSCKQRNIELMCNKLQEENNLLLTTERLKNRLIELRAQYRSAKKQRLKCAKNQQKFSAAEFEFYEALNFLDDHIDPFVCDKCRMEFKKLTDYNRHSKKEHSPKKRNIVPPSAEPGMENVCHICGIKFTTRSNLLHHIKRHEGIRNYACTMCSKRFYASHALKVHTRSHTKECPYTCEKCGISFVSASKLNQHVKRHLNQKDFECSYCPKTFFTAFEKDRHERRHLNIRDKVCPICAKTFVAGSSYYAHLMLHSDTKRFECDKCDMKFAQYPGLFKHKKRHHT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -