Esuc004787.1
Basic Information
- Insect
- Epicampocera succincta
- Gene Symbol
- -
- Assembly
- GCA_932527255.1
- Location
- CAKOBP010000017.1:4271248-4280356[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.045 2.9 8.6 0.7 1 23 1658 1681 1658 1681 0.94 2 11 0.37 24 5.8 1.3 1 23 1843 1865 1843 1865 0.94 3 11 0.00063 0.041 14.5 2.8 2 23 1868 1889 1868 1889 0.97 4 11 3.1e-05 0.002 18.6 0.2 3 23 1897 1917 1895 1917 0.98 5 11 6.2e-06 0.0004 20.8 5.8 2 23 1924 1945 1923 1945 0.97 6 11 0.03 2 9.2 0.1 2 23 2015 2035 2014 2035 0.96 7 11 7.4e-05 0.0048 17.4 0.4 1 19 2041 2059 2041 2063 0.95 8 11 4.2e-06 0.00027 21.3 1.8 1 23 2071 2093 2071 2093 0.99 9 11 0.00015 0.0096 16.4 6.5 1 23 2099 2121 2099 2122 0.96 10 11 0.00089 0.058 14.0 6.4 1 23 2127 2149 2127 2149 0.99 11 11 0.0024 0.15 12.6 5.8 1 23 2155 2177 2155 2178 0.96
Sequence Information
- Coding Sequence
- ATGACGGAAACTGTGCAGTGTCCAGTATGTACTTTATACCTGCATGCAGGTATGAACCTTTCAGACCACTTGGAAACCCATCCGAAAGAGCAAGTTATTCGTGCTCTGGTGCAAATGACCATATCTGGAGCAGGAGCTGCGAATAGTAATAACAATATGTTATCATCTGTTTTAAATGCTAGTGCTACCAACAAACAGTCTACTGATTTGCAAGAAAAGCCTTCAACTGTAAAAGAGAATGAAGTTGATATTAATTGTACGGCCTATAATACAAGCAAAGCGGCTAACATCTCTTCATTGGCAAACCAAAGCGCTAACAGTAGTCAAAATTTAAAAACTGTACATAATCTTTATGAAACTAAAACTGAACCACAAAATGAAAATGAACTCGAAAAAATTTCAAGCCAACAACCCGCTGCACCGATCAATACAGTCGTTAAAACCGAAACAACCAATACCGTTGCAACAGCTAAAATAAATGTTCTGACTAACGAAAATGTGAGCCAATGCTTCTCAAAGCAAAGCTACAACCAAACTATTTCTGTCTCTAGCTCAACAACAAATGCTAGTCACTCTTATCGAAATTCTGTTGAGTTGGCAAATGCAACAAGTGTTCACAACAATTTTAACGTTTTTGGGACAAGTAATCGGTATGAACAACAACGTTCTGGTATCAGCAACCAAAATCAATTGTCCACTCTACCGCACATGCCGCCACCACCATCTCCAACTTCGCCGCAGATTGAACCTTCTGGTCAACACCAGGATGCTGCTGGCCGGGGAATTCTTCCAGTCGGTACGAATGGAGCATTTCATTCTATACAGCCACTGCAGTTGCCTCCACCACCCCCACCGCATCATACAACGTCGCATTTAGGAAATTCTGGCAGCCTTCGGCAGGCTCAAATATACCAGTCAGGTCAACAACATCAGCATCCACCGACAAATTCGCATCATGCACAAAATCTAAAGGTTATATACACACCTAGCTTGCCTCCACCACCTCCGCTACAGTTGTTTACTTATCAACCACAAACACATTTGCAACAGCATCAGAAGCCCCCACCGGCCTATGGCACTGCAATTAGTCAAATACGATCTCAGCATAATCAAAGCAAGCATCAAGTTACAGGGTCATCGAGTACACAGCAACATCAAACACTGCAAGCACATTCAGTTTTGCAACAACAACTGACGCTACAGAATATACAACAGGATCAAACATCGCAGCATAATTTAAGAATACAAATACCACCGCCGCCATCTCCGCTTCCAGAAAAAAATACATACTCGCAAAAAAACAGTGATGTTTCACAGCAAATTCATTCTACAACTTCAAGACATATACAGCCGCAACAACACCAACCACAATCCAAAGTGGATTTGTCACATCGTCAGCAAACCCCACAACAGCAAGAACAACAGCAACCTCAAGTTAATATAGAAAGTTCTCACAGTTTGAGCAATCCGGATGTCAGTTCGAATGAAGTTGTAAACAAGTCTCCTTCAAAGATAACGTCTTCAGCGACATTGCAAACCCCAAATTTGAATGCAAATACACCTCCTTCATATCCGCAAGTTTCGGTAAGTCCATCCGTTGCACCGGCTTCAATGGCATCTGTTGCTGTTTCAACACTGGCAAGACATACCAACTCTCCATTTGCCGCACTGTTGGCAGCTGCTGCCGGCGCTCCTTCCCCTTCAAACACTTCGTCAGTTTTAAGATACGCTGAATCGCCAGTAGCCCATTATTTGGAAAGGGACAACGGTGACTTCATTGTCCAAGAAACTCCAAAACATATTGTTGAGTGTGTTGAAACGGATAATGGCGAGTTCTCTGTCATTGAACGTATTTATCAATCACCACCAAGTGTTTTACACATTCATGACGAGGACGATGATGAAGGTGAAGACCACAAATGCAATGACGGAATTGAAGACGAAAAACTGGAACTTGCCGATAGCAAACTGAAACAGAATGATGTCGTTGACAAAGATAAACAAAATAAAGCACTTTGCAGAAATGTCAAAATTAAGAAATCTGAACCACAATCCAATTTCGATGATAAAATTTCAACTGATGATGAGATTGTTGACTTTGTAAGTATTTCTAGTGAAAGTAGTGACGAAGAAGAATTTATTTCTCAAAAACAAAAAGATCATAAAAATACCACCGAGAAGACCAAAAAGAATCGATTACCCTCAAAATGCACCCTCTCAATGTCTACAAGTTCAATACAGTCTTCTTTAACATCATCTACAATAGCGACAACACCGAACGATGATAATCAAACACCAATATCTTCAACGTCCACTCCAGTCCACACATCTCCTTCCTTTGCTGCCACCACGCCCAACACAAGTTCTATACAACACAATTCGTCTAATAACACTGCAAACAGCACCAGCAGTCGGAAGAAATCATCTAAGAACACTATCACAGTTTTGAGCGATGTACAATTAAATTTGAATGAATATTTGGATTTAGTTGGAAATATTATTGCGTCGAGCAAAGTTGCATCTCAACGTAAAACGTTCACGTCTATTGCTCCCATTCCTCTTGTAAAAATTGAAAAGGAGGAGCCGATGGATGATTACGTACCAACAAACACAACAGCATCGATGGACACACCACCACCCCTAAACGCCAACAAACGTGAGACTGAAGAAATAACTGATAACCCTAAAAATAGTTGTAATAAACAAACAACAAAAAACCATAAAATTATTTTAGAAAATGAACTGGAACAGGATGAAAAGGAGGAGGAAAAACCTCAAGTATTCGTAAGTGCATCTGATAATGAAATATCAATTGGCATTTCGAACGCTTCTCCAAGCCACATGAGTATAAATTCCAGCCAAGTTACTAGTGTAATACGTATGGCAACAACTAGTCAACACCAGCAACAAGAAAAACAGCCAACTTCTGTGGAAAGCATTAAAAATCCGAACAAAGCTGAGGATTTATCACAAACGCAACAAAAAGTTCAATCCTCTGCAATTTCTAAAACTTTGAGTCACACATCGCTGGCTCGTAAAGGTCCAAAAAAACTAATTATAAAGCCAAAATCTACAAAGACTGACGTTTTGTTAACCGCAACCATAGAAAGTAAACGAAACCAAAATCAAACAATTGAGGATCACGAATTTCCCTCTACTTCCGCTTGTACTCAGGAGGAACGAGCAAAAATAAGTTCCACCGGAAAAGATATGTTAAATACTACAGATATAAAAATTAAAAATGAACCTATTACGTCTGCAACATATGGAAATCTCCAACAGCAACCTAACTATACATCAGGTTCAAATTTCAGTATCTTAGAACATCATCTTAGTTCTAAAGAACCTGTTCTTGAATTTAAAGAAGAAAAGCCTTGCATAACAGAGCCTAGTTTACCATCAGCTTCAATTATAAAGGAAATGAAAATAGAAAATAACGTTAACGATGATGCACGTGTTCTTTATGATTTTGCCAACTCAAAAAAGTCACAAAACGAAACATCGTCCACTTTTCCATCTTCCAAATCGCTTTTTTCAAATAATCAAACTTCTCTTGAAATAACTTCAGTGGAAGGACTTCAAAATGACCACATTAATAAAAACATAATTCAAGAAAATGAGTCAACGTCCTCAACATATTCTTCACATTCAATGATGGATACTTCTACGCCACCGGAAGAGCAAAATGAAAGTTCAGCTGCAAGTGTTTCAGTTGCCCATACGCAAAATCAAACCATTCCGGTCTATAACGATTTTCATTTCAGTTATCTTTATAATAACATTGGCAGCAACATTACACCAATTGCTGCTGAACAAGCCGATGTAAAGAATCATCAGTTTTCTTCGTTTTATCAAAACTCTACGAATAACAACAATAATATACTGTTGCAAGAAGACTCATCGTCCAGTAAACACTACACAGATTACCAACAACTTCAGAGTAATCACAATAATTTGCAACAACACCATCATGTTGTTGCAACATCACATGACCAATGGTTTAACAATAACAATTATCATGCAACAGAACACAATGTTTCTCCCATTTCTTCAAACCAGTCAGTCTGCAATGTCAATAGTGGCTTATCTGTTGATGGTGATAACGCTCCACTGGATGGTAATGAAACCAATAAATATTTAGATCTTGATTCATGTAAACGGGAACAAACCATTGATTTGAATGCCAGCGATCGCGTTCTACCACCGCCACCACCGTCTTCCTCAACCTCGTGTTCTTTTAACGGTACGGCTGAAAACAGCATGGCGGGTGTTTGTTCTTCTGCAGTTACTCTAAATATAAGAACAGATGAGAAAATGCCTGCTAAAGGGGAAATTTCCGAGCAAGAAAGTAATTGCGATATTGATAACTCATGGAGTCAACCGATGTATGGTGATATTTCGGCGCGTTTCTTCAAGACAACATTTCCCGCCATATTTCCGCCAGACAGCGGTTGGAACCATGACGAATACTTTACTGTACAAGATTTGAGTGCATCAACTAATGTCTCCGGTACAAATAGTACAGCCAACAGAATAAAAAGTTTTGATCAAATAAGCAACAACAACAGCAGTGGAATGCCTATTTTCTCCCAAAATTCAAACGACAATTGCAATATGGATGTTATGCCTTCAACATCGGCAAAAATAAGAAAGAAACGTAAACGTAGCTCTCAAGATGAAAAGTCATTCCAAGCCGTTGGTAAACGAATGCAACCGACATCGACGGTAACCTCTCAAGAAATGCTTATTCAACACCAAAATGAAATATCGGGGGCGGATTTAAATTTTCAAAGTCAGTCCCAGCATCAGTTACAGCAGCATTTGCAGCAATCGAGTACATCAACTTCATTTTTGGCAGGGCCATCAAATGTTGGTGGTAGTGCTTTGGCAACGGGCTTCATGATGCAACAACAACAACAACAACAACAATCTCAAACACAACAACCACAACAAAAGCAACGCACAAAAGTCTACGAATGTGGTCATTGCAATGCAAAATATTCAAAACTTAAAGATCGTAATGCTCATATGATTGATGTTCACAATTACATACGTCAGAACAGGAGATTAGTGTGCCCCACAACTGGTCTTGTCACACCTCTTGGCAGTTCGGATAATCCAGATGTAGCTTTGCCTACAACAAGTGCTGCAGGTAGTATGTTAATACCACCTTTACAAAACGACAACGCAGCGGGTGACTTTAAACAGAGCATAGTTAAAATAGAAAATGAAAACCCCCATCGAGATCTGTCCGAATCGATTAATGCCGATTTGTGCGCTAAAGCTGAAATGGAAATGGAAGACGATAAACACAATCTAGCTCTTGTGTCTTCGAACGCCACAGCAAAAATTGAATCAGTTGAATACGAGAGTAAACCACCAACCGGCAGCTTTCCGTTGTCGCTGACGACGCCAAGCAGTAAATTAACTACGTTATATCGTATGCTTGTGTCTTTTAATATGACAACATTAAAACAACACCAAAGCCTCTCTGAGATAGATGAGAATCTTATAAAGTCATCAATATTTTTTTGTTACATCTGCCGGAAAAATTTCAATTCAGTTAAATTGTACGATGCTCACTTGACCGAACATCCAGCCGAATGCTTTACTTGTGGGAAGAAGTTCCAGCGATGGAAAAATTTCTCATTACATTTGAAACGACACTTAGGTTGGAAGGAATTCGGTTGCACTGTATGCGATAAAAAATTCGTTGTGCGAAGTGCTCTTGTTGAGCACATGCGCATGCACTCTGGACTCTCTCCGCTGAAATGTAAAGTTTGTGGTAAGCATTTTAAACGGTATTCGAACTTAACACAGCATCGGAAGAGACACACCAAACAAATAATTCGTCGGAAGGAGTATGTCTGTTACTGCGGAGAGGTTTTACCATCAAAGGCGCGCTTCCTGTGGCATAAGGAAATACATGATTTAAAACCGAAATGTTGCCCACATTGTTGTGACCGTTTTGTTCATGTCAACTCTTTACGCCGGCACATACGGCTCGCTCATTCCGATAAATTTGATTACACTGAACCGATGGAATGCCCAATATGCAAGCAAATATTTGCAAAGGCCTCTATGAAAGCTCACATGGCAACACATTCCACGGAGACACAATATGACTGCGCTATTTGCAATAAATCTTTCTCAACAAAATGGAATTTGAAAATTCATTCCTGGGTGCACGCTAATCGCACTACAAAGCCTTTTAAATGTGAACACTGCCCAAAGGCATTTGTGCGCGAGGTTGACTTTAAAAATCATATGAACTCTCACAAACAAATCAAACCTTATACGTGTGAGGTTTGTGGTTGTAAGTTTATACGCAAATATAACTACATGCGCCATAGAAGGGAACACCATGGCAATAAAAAATATACCTGTGATCTATGTAAGAAGTCGTTCCATCGCCATTATTATCTCATCGAACATCGGCGCATTCATACCGGCGAACGACCTTTTCAATGTTCAATATGTGGCAAGAGTTCAACAACAAAAACTAACCACAACAAACACTTAAAAATACATCATTCACGCGATCCATTTACAGTAGAAGTTTAA
- Protein Sequence
- MTETVQCPVCTLYLHAGMNLSDHLETHPKEQVIRALVQMTISGAGAANSNNNMLSSVLNASATNKQSTDLQEKPSTVKENEVDINCTAYNTSKAANISSLANQSANSSQNLKTVHNLYETKTEPQNENELEKISSQQPAAPINTVVKTETTNTVATAKINVLTNENVSQCFSKQSYNQTISVSSSTTNASHSYRNSVELANATSVHNNFNVFGTSNRYEQQRSGISNQNQLSTLPHMPPPPSPTSPQIEPSGQHQDAAGRGILPVGTNGAFHSIQPLQLPPPPPPHHTTSHLGNSGSLRQAQIYQSGQQHQHPPTNSHHAQNLKVIYTPSLPPPPPLQLFTYQPQTHLQQHQKPPPAYGTAISQIRSQHNQSKHQVTGSSSTQQHQTLQAHSVLQQQLTLQNIQQDQTSQHNLRIQIPPPPSPLPEKNTYSQKNSDVSQQIHSTTSRHIQPQQHQPQSKVDLSHRQQTPQQQEQQQPQVNIESSHSLSNPDVSSNEVVNKSPSKITSSATLQTPNLNANTPPSYPQVSVSPSVAPASMASVAVSTLARHTNSPFAALLAAAAGAPSPSNTSSVLRYAESPVAHYLERDNGDFIVQETPKHIVECVETDNGEFSVIERIYQSPPSVLHIHDEDDDEGEDHKCNDGIEDEKLELADSKLKQNDVVDKDKQNKALCRNVKIKKSEPQSNFDDKISTDDEIVDFVSISSESSDEEEFISQKQKDHKNTTEKTKKNRLPSKCTLSMSTSSIQSSLTSSTIATTPNDDNQTPISSTSTPVHTSPSFAATTPNTSSIQHNSSNNTANSTSSRKKSSKNTITVLSDVQLNLNEYLDLVGNIIASSKVASQRKTFTSIAPIPLVKIEKEEPMDDYVPTNTTASMDTPPPLNANKRETEEITDNPKNSCNKQTTKNHKIILENELEQDEKEEEKPQVFVSASDNEISIGISNASPSHMSINSSQVTSVIRMATTSQHQQQEKQPTSVESIKNPNKAEDLSQTQQKVQSSAISKTLSHTSLARKGPKKLIIKPKSTKTDVLLTATIESKRNQNQTIEDHEFPSTSACTQEERAKISSTGKDMLNTTDIKIKNEPITSATYGNLQQQPNYTSGSNFSILEHHLSSKEPVLEFKEEKPCITEPSLPSASIIKEMKIENNVNDDARVLYDFANSKKSQNETSSTFPSSKSLFSNNQTSLEITSVEGLQNDHINKNIIQENESTSSTYSSHSMMDTSTPPEEQNESSAASVSVAHTQNQTIPVYNDFHFSYLYNNIGSNITPIAAEQADVKNHQFSSFYQNSTNNNNNILLQEDSSSSKHYTDYQQLQSNHNNLQQHHHVVATSHDQWFNNNNYHATEHNVSPISSNQSVCNVNSGLSVDGDNAPLDGNETNKYLDLDSCKREQTIDLNASDRVLPPPPPSSSTSCSFNGTAENSMAGVCSSAVTLNIRTDEKMPAKGEISEQESNCDIDNSWSQPMYGDISARFFKTTFPAIFPPDSGWNHDEYFTVQDLSASTNVSGTNSTANRIKSFDQISNNNSSGMPIFSQNSNDNCNMDVMPSTSAKIRKKRKRSSQDEKSFQAVGKRMQPTSTVTSQEMLIQHQNEISGADLNFQSQSQHQLQQHLQQSSTSTSFLAGPSNVGGSALATGFMMQQQQQQQQSQTQQPQQKQRTKVYECGHCNAKYSKLKDRNAHMIDVHNYIRQNRRLVCPTTGLVTPLGSSDNPDVALPTTSAAGSMLIPPLQNDNAAGDFKQSIVKIENENPHRDLSESINADLCAKAEMEMEDDKHNLALVSSNATAKIESVEYESKPPTGSFPLSLTTPSSKLTTLYRMLVSFNMTTLKQHQSLSEIDENLIKSSIFFCYICRKNFNSVKLYDAHLTEHPAECFTCGKKFQRWKNFSLHLKRHLGWKEFGCTVCDKKFVVRSALVEHMRMHSGLSPLKCKVCGKHFKRYSNLTQHRKRHTKQIIRRKEYVCYCGEVLPSKARFLWHKEIHDLKPKCCPHCCDRFVHVNSLRRHIRLAHSDKFDYTEPMECPICKQIFAKASMKAHMATHSTETQYDCAICNKSFSTKWNLKIHSWVHANRTTKPFKCEHCPKAFVREVDFKNHMNSHKQIKPYTCEVCGCKFIRKYNYMRHRREHHGNKKYTCDLCKKSFHRHYYLIEHRRIHTGERPFQCSICGKSSTTKTNHNKHLKIHHSRDPFTVEV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -