Basic Information

Insect: Epicampocera succincta
Gene Symbol: salm
Assembly: GCA_932527255.1
Location: CAKOBP010000030.1:3111515-3131363[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 5.5e-06 0.00035 21.0 0.9 1 23 535 557 535 557 0.98

2 7 1.1e-05 0.0007 20.0 2.1 1 23 563 585 563 585 0.98

3 7 0.018 1.2 9.9 1.5 2 23 946 967 945 967 0.98

4 7 7.7e-08 5e-06 26.8 0.5 1 23 973 995 973 995 0.98

5 7 0.00024 0.015 15.8 2.3 1 23 1005 1027 1005 1027 0.98

6 7 0.04 2.6 8.8 3.1 2 23 1395 1416 1394 1416 0.97

7 7 3e-08 2e-06 28.1 1.3 1 23 1422 1444 1422 1444 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	5.5e-06	0.00035	21.0	0.9	1	23	535	557	535	557	0.98
2	7	1.1e-05	0.0007	20.0	2.1	1	23	563	585	563	585	0.98
3	7	0.018	1.2	9.9	1.5	2	23	946	967	945	967	0.98
4	7	7.7e-08	5e-06	26.8	0.5	1	23	973	995	973	995	0.98
5	7	0.00024	0.015	15.8	2.3	1	23	1005	1027	1005	1027	0.98
6	7	0.04	2.6	8.8	3.1	2	23	1395	1416	1394	1416	0.97
7	7	3e-08	2e-06	28.1	1.3	1	23	1422	1444	1422	1444	0.99

Sequence Information

Coding Sequence: ATGAAAAATATTTTATCAACTGTTTTGTGTGAAATGAGAAGTGATTTCAAAGAAGCCCATCAAGAAACCATAAATAAAATGATACAATTTGGTACCGTCAAATATGGCATTGTTAAACAATTAAAAGATCGAGCTAAGAGCCCGGAGAAAGATTCAGCCAGTGATCATGAAGAGAGTGGTACATGTTCACCTTTGGCTGCCACAACCGCCAATGAAGATAGTGATTGCGATAGAGCAGAATTAACTCATATGGCCGCTAGTAATGAACTTGTTAATAAAATTAACACAACACCCGCTGAAGCCGATAAACAACAGCCACAACAGACTTCTGCAGCAGGCTCAGTCAGAGAACAAGAAGAAGCAGAGGAAGATCTTAATCACAACAACAACCTTGTAATGCCTATGGAAGAGCAACAGGAGCAGAAGCAGCAGGAGTTACAGATACAATCTCCCGCACGTTCAGAGAGCTTAAATGCGGCTTTGAAGCCCTCTAAAACATATCCAAACGAAGAGGAGTTCCCCTCGCCCACTCCGCCCGATCTTAATGAGAGCCAAGAACCTTCAAGGAAAGCTCAGGAGGCCAGCGAAGATGCTAACAACGCGGAAACAGCTAAGCAAGGAGAAGAAGAAGCGATCGAATCTTTAAACACTTCAGATAACAAATGTTTGAGGGCCAATAAATACGAAACGGCCCATAACAGGAACTCAGAAGGTGTTGAGAATGAAAGCAGAACTCCACAAATGGAGTCAGAGGAAGGTGTAGTTGCAGAGAGGATGGAAAAAGCATCATCTAAGAAAGACGTAGAAATGGATGTTAAGCATGCGGAATCTACTTCTCCTTCTTTTCCTGCCTCTTTGACCCAGCAGTTTGGTGCTTCTCCCGTCAACATAGAAGCTATTAAGAATATGCAGTTGGCTATAGCCCAGGCGGCTGCCAAAACCATAGCAAACGGCGCTTCTGGTCAGGATAATGAGGCTGCCATGAAACAGTTAGCCTTCTTGCAACAAACTCTATTCAATCTGCAACAGCAGCAACTATTTCAAATTCAACTAATACAACAGCTGCAGTCACAGCTGGCCATGAATCAAACCAAGGCAGGCGAAGAGGTCAATGAAATGGAGGAGGATGAAGAGGAGGAAGGAGAGAATGGTGAAGAAGACACATATGAGGAGGAAGAACGTATAGCACAAATGGAACTAAGACAGAAAGCGGAAGCTCGTATGGCGGAAGATAAAGCTCGCCAACATCTCATTAATGCTGGCGTACCCCTGGATTCTCTTAAGCGGAAGCGGGACGCTGATAATGACGAGGAAATTAATGTTTCTGCGTCTCGGCGTCTAAGTATGGAGAAAAGCTCAAGCTATGCTTTGGACAAGCTAAAAGACATGGAGAACAGGCCCTTGCCTTTTGGATCAAATTTGGCCTCTTCAATTATTACAGATCACGATGACATGCCTGAACCGAATTCGTTGGACTTGTTGCAGAAGAGAGCTCAGGAGGTATTAGATTCGGCGTCTCAAGGCATTTTAGCAAATAACATGGCCGATGAGTTTGCATTCAAAGAAAAAAATGGCAAAGCCGGCAACGAGCCCTTTTTCAAACACAGATGCCGCTACTGTGGTAAAGTCTTCGGCTCGGACTCCGCTTTGCAAATTCATATCAGATCTCACACAGGTGAACGACCCTTCAAGTGCAATGTTTGCGGCAGCAGGTTTACCACCAAAGGAAATTTAAAAGTGCATTTTCAAAGGCACGCTCATAAATTTCCACATGTACCTATGAATGCTACACCCATACCCGAACATTTGGACAAGTTTCATCCTCCTCTCTTAGACCAAATGTCGCCGGACAGCTCTCCCAGTCACACACCTGCCGCAATGCCACAACAAATGCCCAGTCAGATGCCACCAATTAGTTTTGCTGGCCCCTCTACCAACTTTACAGGCTTGGGGAGTCTTTATAGGCCCCCCATAGACATATTAAAGTCATTGTCTGCTTCCTCAGGATCCGGATTCAGTAATCCTTTCTTTTCGCAAGTTCCCGGGAATTTGGGAGAGGCTGCGGTGCAGGCTCAAGCAGCAGCACAAGCTGTCCTAAACAAAAATCAAGAAATCGCCGCAGACTTAAGTAAAGTTTCCGAACCAAATTCGCCCGCAAATACACAGATAAAGTCAGAGTTATCGGAAGAAAAGCAAGACGAACAAGAAGATAAGGCGGCCAAATCAAGACCTGCATCAGACGCACTCAAAACCTCATCACCTTTACCTATGGACATAAAAATCAAGGAAGAAAAATACGATTGTGAAATTGTAGAAGAAAGAGAACGCAGCCCGCTACCACTTCCATCCACAACCAGTCCCGCTATTTCTGCGCACTCATCTTTAACGGAGCCCCTACCCCAAGTACCTAAAAGTTCGCCTCTACCCACCTGTAAACCACCCACCACACAGCAATTACCGCCGGTAGTACAACCCATACAACCTCCTGCCCTTCTGCATCCTCAACCGTCACCCGGGTCTCAGCATCATTTGGATCACTTGCCAACACCTGGCCAGTTGCCACCCTCCATGCATCATCGTGACGACTTTTTCGCCGAACGTTTTCCTTTAAACTTTACGAAAACTTTGTCACCTGAAAGACATTCGCCGATCAGATCACCCGCACATATGCCACGCGCTCCCTTTTTCAATCCCATGAAACCACATGACATGGCTTTACTGCCTCGTCCTCACAGTAACGATAATTCTTGGGAAAACTTCATCGAAATTTCAAACTCTTCAGAGACCATGAAGCTAAAGGAACTAATGAAAAATAAAAAAATTACTGATCCAAATCAGTGTGTTGTGTGTGATCGTGTCCTGTCTTGTAAAAGTGCCCTGCAAATGCACTATCGCACTCATACAGGCGAAAGACCCTTCAAGTGCCGCATTTGTGGTAGAGCCTTTACAACAAAAGGCAACTTAAAAACTCATATGGCGGTTCACAAAATAAGACCACCCATGCGCAATTTTCACCAGTGTCCGGTTTGCCATAAGAAATACTCGAACGCTCTAGTGTTACAGCAACACATACGCCTGCACACTGGTGAACCGACAGACTTAACGCCTGAACAAATACAAGCTGCTGAGATACGCGACCCTCCGCCATCTATGATGCCGGGCGCCTTTATGAACCCTTTCGCTGCGGCTGCTTTCCACTTTGGTATGCCAGGCGGTCCCGGTATGCATCCCCTAGGCGGTTTACACAACGGTTTGGGTTCGGAGTCATCCCAGGGAGACTTTGACGACCAAATGGATTGTGGAGACGACTTCGATGACGACATGTCCTCTGACCACATGTCGAATAGCAATGATTTGGAGCCAGGCAGTGAGAGACCCAAGTCCACAGATGACTTCAAGGGCTTGCTATTTGAACAAAAACTAAGAATAGATCCGACTGGTGTAGTAAATACGAATCCTCGGCCGCAGTCTGCAATTTCTAACCCGAATTCAATGAACTCCCCACCAACGAGCCCAATATCTGTGGCGAAACCGTCAAGTTCGACGAGAGCTGTATCGCCAGCCAGATCCGAAATGTCGCAAGGAGCTTTAGATTTAACACCACGTGCAGGGCCTTCATCAGCCAACAGCAGCCTTAGCGCCAGATCGCCATTGCCCGCCCATAGCACTAAACGTTCACCCTCACCCATGAATAAATCCCCAAAATTACCGCAAATAAGTCCCTCTGCCGCCATACCTCCCCCTCCTGCTGTTGATTGCCTGCCACCCAGCTTACACCATCACTTGCAGCAGCAACATCAGCAGCTAATGCAACAACAAGCTGCCTTAGCGGCTGCACAACATCACCAACAAATGCAGCACAATGCCGTCGTTGCCATGCATCAGGAACAACTAAGACGAGAAGCTGTTGCACACGCGCAACTCTCACCAAACGCTCCGCAATCAGCTGCACAGCAATCGCCTTCAATGCAGCCGTCTGCCTCACCGCAAATACCACATCCCCAAGCACCAAATCCCCTAGTAGCTGCTGCCCGACCGCCATTCGGCATGTTTCCGAATCTGCCGCTCTTTCCACCGGCTTCCACACAAAATATGTGCACAGCCATGAACTCTATTGCGCAGTCTGTTATGCCGGCGGCACCGTTTAATCCTTTAGCTCTATCGGGAGTCAGAGGCAGCACTACTTGCGGCATTTGTTTCAAAACATTCCCCTGCCATTCGGCTTTGGAGATTCATTATAGAAGTCACACTAAAGAGAGGCCATTTAAATGCAATATATGTGATCGGGGCTTTACAACAAAGGGTAACTTAAAACAACACATGCTCACTCACAAAATCCGTGACATGGAGCAGGAAACTTTCCGAAATAGAGCAGTCAAGTATATGAGTGGTGGCAAGGAAGATTGA
Protein Sequence: MKNILSTVLCEMRSDFKEAHQETINKMIQFGTVKYGIVKQLKDRAKSPEKDSASDHEESGTCSPLAATTANEDSDCDRAELTHMAASNELVNKINTTPAEADKQQPQQTSAAGSVREQEEAEEDLNHNNNLVMPMEEQQEQKQQELQIQSPARSESLNAALKPSKTYPNEEEFPSPTPPDLNESQEPSRKAQEASEDANNAETAKQGEEEAIESLNTSDNKCLRANKYETAHNRNSEGVENESRTPQMESEEGVVAERMEKASSKKDVEMDVKHAESTSPSFPASLTQQFGASPVNIEAIKNMQLAIAQAAAKTIANGASGQDNEAAMKQLAFLQQTLFNLQQQQLFQIQLIQQLQSQLAMNQTKAGEEVNEMEEDEEEEGENGEEDTYEEEERIAQMELRQKAEARMAEDKARQHLINAGVPLDSLKRKRDADNDEEINVSASRRLSMEKSSSYALDKLKDMENRPLPFGSNLASSIITDHDDMPEPNSLDLLQKRAQEVLDSASQGILANNMADEFAFKEKNGKAGNEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHAHKFPHVPMNATPIPEHLDKFHPPLLDQMSPDSSPSHTPAAMPQQMPSQMPPISFAGPSTNFTGLGSLYRPPIDILKSLSASSGSGFSNPFFSQVPGNLGEAAVQAQAAAQAVLNKNQEIAADLSKVSEPNSPANTQIKSELSEEKQDEQEDKAAKSRPASDALKTSSPLPMDIKIKEEKYDCEIVEERERSPLPLPSTTSPAISAHSSLTEPLPQVPKSSPLPTCKPPTTQQLPPVVQPIQPPALLHPQPSPGSQHHLDHLPTPGQLPPSMHHRDDFFAERFPLNFTKTLSPERHSPIRSPAHMPRAPFFNPMKPHDMALLPRPHSNDNSWENFIEISNSSETMKLKELMKNKKITDPNQCVVCDRVLSCKSALQMHYRTHTGERPFKCRICGRAFTTKGNLKTHMAVHKIRPPMRNFHQCPVCHKKYSNALVLQQHIRLHTGEPTDLTPEQIQAAEIRDPPPSMMPGAFMNPFAAAAFHFGMPGGPGMHPLGGLHNGLGSESSQGDFDDQMDCGDDFDDDMSSDHMSNSNDLEPGSERPKSTDDFKGLLFEQKLRIDPTGVVNTNPRPQSAISNPNSMNSPPTSPISVAKPSSSTRAVSPARSEMSQGALDLTPRAGPSSANSSLSARSPLPAHSTKRSPSPMNKSPKLPQISPSAAIPPPPAVDCLPPSLHHHLQQQHQQLMQQQAALAAAQHHQQMQHNAVVAMHQEQLRREAVAHAQLSPNAPQSAAQQSPSMQPSASPQIPHPQAPNPLVAAARPPFGMFPNLPLFPPASTQNMCTAMNSIAQSVMPAAPFNPLALSGVRGSTTCGICFKTFPCHSALEIHYRSHTKERPFKCNICDRGFTTKGNLKQHMLTHKIRDMEQETFRNRAVKYMSGGKED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00045570;
90% Identity: -
80% Identity: -