Esuc006016.1
Basic Information
- Insect
- Epicampocera succincta
- Gene Symbol
- -
- Assembly
- GCA_932527255.1
- Location
- CAKOBP010000022.1:2651871-2657280[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.58 38 5.1 0.6 1 23 285 308 285 308 0.92 2 13 0.042 2.7 8.7 0.3 2 23 387 409 386 409 0.95 3 13 9.4e-05 0.0061 17.1 0.8 2 23 861 882 860 882 0.97 4 13 3.7 2.4e+02 2.6 0.1 3 23 892 913 890 913 0.80 5 13 0.00063 0.041 14.5 0.7 2 23 920 942 919 942 0.92 6 13 0.00028 0.018 15.6 0.9 1 23 947 970 947 970 0.96 7 13 0.0053 0.34 11.6 3.0 1 23 1217 1239 1217 1239 0.98 8 13 0.0032 0.21 12.2 1.1 3 23 1247 1267 1245 1267 0.98 9 13 0.021 1.3 9.7 4.3 1 23 1273 1295 1273 1295 0.98 10 13 1.4e-06 8.9e-05 22.8 0.6 1 23 1301 1323 1301 1323 0.98 11 13 0.00029 0.019 15.5 4.8 1 23 1329 1351 1329 1351 0.98 12 13 0.00028 0.018 15.5 3.2 1 23 1359 1381 1359 1381 0.99 13 13 0.0002 0.013 16.1 0.2 1 23 1387 1410 1387 1410 0.97
Sequence Information
- Coding Sequence
- ATGATCAACACTTTGCTGGAGCATGTGCCCATTAAAATGGAGGTGCAAGATATTGATGAACCTAACGGCATTCCAGTTAATCCGCGACACGAAGACGGAGTAGCAAAAgatgatgaaaatattgatgagaccgacgaagatgtggatgctgacggcagtgaggatgacgaagatgaagaggatattgacgaggatgatgaagaagacgaagaagaATCTGATATTGAAACTGATGCCTTGGAAATTGAAAAAGAAGCCACTATGCTAATAAGCAGTGATGAAGAAGCCGAACTGGAGGCGCAAAGAATACGTTTTCCTGATATTACAGTCGCAAAGAAATTACGCAGAGATTCCAACATGTCTTCTGGTAGTTCAACCAGAAGTAGCCAAACAAGCAATTTATCCTCTCAGCCACATATTACTTACGAAATTGTCAAACAAAAAGACTGCACAACAGAGGAAACAAACAATAAACAAAGAATTTCACCTCGCCTAAAGCATATGGGGAACAAATCTTTGGAGAGCTGTAACAAAGAGAACAACAACAAAAACAAAATTCTGCTAAAACAAAAAACAGAGAACAAAAATTTGGAAAATCATAAAAGTTTGGAAAACGGTAAAACCAAACCCGAAGAAACCCACAAACGTTTGGAGCATCATAAAACCGCTGATATTCACAAAAATTCTGAGAATACTCGTAAAAAAGAGAACTTGTTGAAATCGCCTGAGCATAAAAGTCGCCGTGGCAGCAATAATTCTACTTGCAGTGTTGCCTCGACGGTGGCCTCTAATAGCGCTGAGACAGAGTCTTGTGGCAACATTTACGTGTTTAATTTGGAACAAAAACTTGTATTTAATTGTGAATTTTGTGATCTTAAATACGGTGATTTGGATAATTTTGGTTTACACCTTCACGAAGCTCATAAGCTTTTCAATTTCGACGAAGATCCTGAAAAAGAAAATGCACCCCGTAATTTAGGTAAGACCAATCGCCAGTCGAATAGTGCGCCAAAAAATTGCGTTAATGTTAAAAAAGAACCCCTACAGTATGTGGACCTAAAGGCTGAACCACCTGTAGCTTTGCCGCCTTCAGCTTTGGCCGAACCCCTAGATTCGTGCGGTAATGTTTTTATGCTTAACCATCGTAAATTATTTTTGGTATGCGGCTATTGTGAGAGTAAATATGCCAATTTGGAGTTGTTTGAGAAGCATTTAAGGCAGCAGCATCGCATTTTTGAGGGCTGTCATAATGAGGTAAATGTTGTACCAAAGGTGGAGGTGAAAGAAGAGGTGTTTGTCATTTCCGAAGTTGCGGACAAACCAGATATTACAATTCCTCAAGCTATGGTAGCCATACCGGCTGAAATACCTTTAGACATAAGTATAACACCTGAAAATGAGCACGAATCAATAGCAGCCCTGGAAGATAAAGTTATTCCAGAAGTGACTGGTGGGAAAGAAACAGCCGTTCTGGCTAAACCAACTGGAGTAAAACAAACATTTGCTTTGGAAAAAATTGCTGCTGAGAAAATAGCAACAGCTCAAGACAAACAAATAGAACATTTTGTGGAAGTGGGCAAAGAGCAGAACTCCTCGGCTGATAATACGGAAGAATCTTCTAAAGAAATAAGGGTCGACGATACAGCGTTATATAAAGAAAACTTGAAAAATGACCCTAAGGAGAAATCTGTTATAAGAAAAACAAGAAATAAAAGACAATCTTCACCGGACAAGCAATTAGAATCGCCCAATAAACGAACGAAAAGGAAAACAAGGAACAACGGGCAAGGCGAACAAGAGTCTCTTGCCGTGAATGAAGCAGACAAGTCCTCAGCAACAAATTTGAAAGCTGATCCGGTTGTGGAAAACGACACATTACAAAATGCTACTGCCGAAGTTGAAAATCAGCAAAAAGCTTGCAAATCAACAAAATGGTTAGAAACTGAGAAAGCAGCGCCTTTAAAAAAGACACCAACCAGACAATGGAATAAAACGAAAGGATTTGAACAAAAGATTGCTTTTAAGGCAACAGAAAAAGTGACTGATACTGAGGAAATATCTTTCAAATTGGCCACACACAACCAGGAACCCGCAGAGCCTGAGAAAAAAACATCTGCGAAATCGACAAAATCTAAAGAGACGAGAAAAACAATCGATCATGAAAAAGCACCGTATTTTAAAAGTACTGAAGCTAAAAAAGCAAGAAAATCGGCAGATGCTGACAAAACCAGAGAAGTAAGAAAAACGACAGATTCAGAGAAACCAACGCTTTTGGTACTGACGGAAAGCAGAGAAACAAGAAAAAAGAAAGAATCTATAAAAACAACAGCTTCAGCTTCAACAGAACCGAAAGAATCGAGAAAAACAAGGGATCCTGAGAAAACAATATCTCTACGAAAGTCGGAAACGAGAGAAACAAGAACATCAACAAAACGTGCAGCAACAGACAATCCAGCTCTTGAAATTGTCGAACCGAAAAAACAAACGCCCTCAAAAACAATTTCAAATAAATCTGTAATATCATCTGAAACTAAAAATCACCAAGATGATGAAAAGTCTGAAACTGTGAATAGCAAATTAAGATGCTCAGTGTGTTCCAAGGAGTTCGCAAAGAAAAAGAGTTTAATTTGGCATGAACGCACCCATCAAACAGGCTCCAACAAACGGTATGGGTGTGGTATTTGCGGCAAAGATTTCTTGGTCGAAAATGAGCGTAAAAGTCACATGCTGGCACGACACAATGTTGATACCTTATCAGAATGCAACCTGTGTTATCGGGCTTTCAGCTCCAAGAGTGGTTTAGAACGTCATAATGAAAAATCTCATGCCGTCAGGCTTTTTAAATGTGGCGAATGTCTCCGAACTTATAGTTCAGAGAGCAGCTTAAAAACTCATATTTATATATATCATAGTGCAAGTAAAAAAGCACCAGGAAAAAATAAAAGGAACTCTGCTCAGAAACTTAATTTATCACCAACGATACAAAAAGAACTTTCTTTGTCAGATGACTCAATGCAGGAGACGGAAGCACTATTGGAGAACAATGTGAAGACCGATAAAACTGGTATTAAGACGCAAGAGGTCATTTCTGGAGATTTACAAAATGTAATAGAAGAAACGACAACAGAAAGTGCTGCAGTGATTCTTGCCCTTGATGATGATATTAATGCTAAACCCATTGATATAATTGATAAACAATTATCAAGTGTAGAGTTCGCAAAACTAGCAGAGAGTGCAGATACGTTTGCTGTGATTCCTCCGTCCAATAACACTGAACAAACAATTTTTGTTGCTGATCTCAATGGTCAAAAAAATAATAATGAAATGGTACTAGAAATGCCATCGGAAAACGCTGAAGACACAACAAAGTCATCGAAGTCCACAACGAAAGCATACGGTGGTGATGGGACAGAGGAAGACGATCCTACTGCCGATCCGGTTAGTGATATTATAGAACAGTTACAAAACGAGCTGGCTGAAAGTTCAACGGAAAGTACAACATCAACGACCAACAATGTGGTTACTTACACCATAAACGCTATGCCGAACAAAGAAGAAACACAAAAATCTGTTGTCTTAGACGCCCAGCTGAATGTTCTGGACAAAACCGAGGATGTGAAGCCGACATTTTTGAAAATTGTTAAACACTTTGTctgcgatatctgttccaagacgtactataaacactcaagactgatcgaacacaaacgcttgcataccggcgaaaagcctttcggctgcgatgaatgtggcaaacagtttcgggtgcgcaaccggctaaacgaacataagcaacgacattccaaagagaagaaatttaagtgcgaaatctgccagctgcccttgtgtacacgacaggactataatctgcacatgcgacatcacaccaacgatcgccgtcaccagtgctcagtgtgccccaaagcttttgttcgcagctctgatttgaaaatacacgaacgtattcatacgggcgagaagccttatgtctgcgatatttgtcacaaatgtttccgtgcaaatcaaaatctgagcgtgcacaaaaagtctcacatgggcgacatttctaaaactttcaaatgtgaattttgcgagaagaagtttatgcgcaaaatagatcgcaaagttcacatgagaacacatacgggcgaaaaaccgtacaaatgcgagatatgtcagcgcggctattcctccaGAGTTAATGTACGAGCCCATATTGACAGGGATCATATAAAAGGCAGCCAAGAGGAGAAAAAAAAGCCGGGCCCAAAGCCACGTTCTCTAAGAGAAGAATTGGAGCGGCAAAAGAAATTAATAGAGGAGTTACAAAATCAGCTATTGCAACAAATTAAAACTGACGAAAAAATAATACTATCCGATGAGGAAATCCAAGGAGAGCACATACTACCCGATTCTCCTGTAAAAGTATCCTCTCCCATTGCAACCCCAACCACAACTGCAGAAAATGATCCCGTACAAAGTGCTTATAAGTTGCTGAGTAAACTGAAGGCATCATCATCTACAACAACTACCTCGAAATCTTTGACAGTAATACCTTCGCCACCTCCCTTAGAGGAACCACCCTCTTCGCCACTCACTGCAAATAATAAGAAAGACACTTCTACAACTCTACTACCTCTTACTATAACACAGAAACTAGAACAAGCTTCGCCTGCAATGTCTTCTGGTTCAGCTACCACTTCCTGCGCTACTACACCCTCACCTCCCCTACCACAACCGGCGGCAGCTGCAAAAACTACAGCCACCAAGGTCGTGTCACAAAAGACCTCATTGGGCATACAACAAGTATCGGTAACAGTCTCCATGCAAGTGGAAAATGTTAGCGCTAATTCAAATACCGCCGAAAAAGATAATTCACAGATCTTGACGACATCACCGGGCGGTGGAACAAGTGTTAAGAAAGAACGAAAGATTACAAGTTATTTTACGGTACTCGACCAGAAATCAAAAGTTTAA
- Protein Sequence
- MINTLLEHVPIKMEVQDIDEPNGIPVNPRHEDGVAKDDENIDETDEDVDADGSEDDEDEEDIDEDDEEDEEESDIETDALEIEKEATMLISSDEEAELEAQRIRFPDITVAKKLRRDSNMSSGSSTRSSQTSNLSSQPHITYEIVKQKDCTTEETNNKQRISPRLKHMGNKSLESCNKENNNKNKILLKQKTENKNLENHKSLENGKTKPEETHKRLEHHKTADIHKNSENTRKKENLLKSPEHKSRRGSNNSTCSVASTVASNSAETESCGNIYVFNLEQKLVFNCEFCDLKYGDLDNFGLHLHEAHKLFNFDEDPEKENAPRNLGKTNRQSNSAPKNCVNVKKEPLQYVDLKAEPPVALPPSALAEPLDSCGNVFMLNHRKLFLVCGYCESKYANLELFEKHLRQQHRIFEGCHNEVNVVPKVEVKEEVFVISEVADKPDITIPQAMVAIPAEIPLDISITPENEHESIAALEDKVIPEVTGGKETAVLAKPTGVKQTFALEKIAAEKIATAQDKQIEHFVEVGKEQNSSADNTEESSKEIRVDDTALYKENLKNDPKEKSVIRKTRNKRQSSPDKQLESPNKRTKRKTRNNGQGEQESLAVNEADKSSATNLKADPVVENDTLQNATAEVENQQKACKSTKWLETEKAAPLKKTPTRQWNKTKGFEQKIAFKATEKVTDTEEISFKLATHNQEPAEPEKKTSAKSTKSKETRKTIDHEKAPYFKSTEAKKARKSADADKTREVRKTTDSEKPTLLVLTESRETRKKKESIKTTASASTEPKESRKTRDPEKTISLRKSETRETRTSTKRAATDNPALEIVEPKKQTPSKTISNKSVISSETKNHQDDEKSETVNSKLRCSVCSKEFAKKKSLIWHERTHQTGSNKRYGCGICGKDFLVENERKSHMLARHNVDTLSECNLCYRAFSSKSGLERHNEKSHAVRLFKCGECLRTYSSESSLKTHIYIYHSASKKAPGKNKRNSAQKLNLSPTIQKELSLSDDSMQETEALLENNVKTDKTGIKTQEVISGDLQNVIEETTTESAAVILALDDDINAKPIDIIDKQLSSVEFAKLAESADTFAVIPPSNNTEQTIFVADLNGQKNNNEMVLEMPSENAEDTTKSSKSTTKAYGGDGTEEDDPTADPVSDIIEQLQNELAESSTESTTSTTNNVVTYTINAMPNKEETQKSVVLDAQLNVLDKTEDVKPTFLKIVKHFVCDICSKTYYKHSRLIEHKRLHTGEKPFGCDECGKQFRVRNRLNEHKQRHSKEKKFKCEICQLPLCTRQDYNLHMRHHTNDRRHQCSVCPKAFVRSSDLKIHERIHTGEKPYVCDICHKCFRANQNLSVHKKSHMGDISKTFKCEFCEKKFMRKIDRKVHMRTHTGEKPYKCEICQRGYSSRVNVRAHIDRDHIKGSQEEKKKPGPKPRSLREELERQKKLIEELQNQLLQQIKTDEKIILSDEEIQGEHILPDSPVKVSSPIATPTTTAENDPVQSAYKLLSKLKASSSTTTTSKSLTVIPSPPPLEEPPSSPLTANNKKDTSTTLLPLTITQKLEQASPAMSSGSATTSCATTPSPPLPQPAAAAKTTATKVVSQKTSLGIQQVSVTVSMQVENVSANSNTAEKDNSQILTTSPGGGTSVKKERKITSYFTVLDQKSKV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -