Esuc005193.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Epicampocera succincta
Gene Symbol
Kr-h1
Assembly
GCA_932527255.1
Location
CAKOBP010000018.1:2638884-2641860[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 8 0.0052 0.34 11.6 3.0 1 23 159 181 159 181 0.98
2 8 2.2e-06 0.00015 22.2 0.5 1 23 241 263 241 263 0.99
3 8 2.7e-05 0.0018 18.8 2.3 1 23 269 291 269 291 0.98
4 8 5.8e-07 3.8e-05 24.0 2.8 1 23 297 319 297 319 0.99
5 8 1.2e-07 8e-06 26.1 1.3 1 23 325 347 325 347 0.98
6 8 0.00017 0.011 16.2 1.5 1 23 353 377 353 377 0.99
7 8 0.76 50 4.8 3.7 1 23 383 405 383 405 0.94
8 8 1.6e-06 0.0001 22.7 0.5 1 23 411 433 411 433 0.98

Sequence Information

Coding Sequence
ATGGTTTATTATCCATCGACGCCATTAATTATTAAATCGGAACAACCTAGTCAGGCGCAAATATGTGCACCTCTCCGGAACCATCATGAACTCCAACATTCTACAGCCCAACTCCAACCAATGACAAACAGCAGTTATATGCTGAACAATGTGAATATCACGACAATACAACATCACCAACAGCAAATGTCACACAATATTAGTTCCAAAACTGTTACAAAAACACACCATCAAACGCCACAACAAACACAACAACAACAGCAGCAGCTACCGCCACAACATCTAACAAATGTTAAAACAGAATTACTACCACCGGGTATAACGTTGTATGCCACCACACAACCAGCTTCCTTAACAACAAAAATTTCTGCTACCCAATCGCCAGCGCCAACATCAACCACAAATAATGTCAGCAGCAGTACACCTGTTTCAACAACATCGGGGGCACGCAAACCGAACACCAATAAGCCACAATTTAAGTGTGAACAATGTGGCATGACTTTCGGCAGCAAATCTGCCCATACCTCTCATACAAAATCGCATGCCAAAAAAGGTGAATTAAGTTTGATAAACAGTGCCAACTGCAATACAAGTGGTGGAGTTAATTCGTCAGCTGCTGTAACGGGTTTGGAGTTGAATGAGGCGGGTGTACCGTTAGGCATACCAAAGACACCACAAATTAAGCCCAACACTAATGCGGCCACAAACGGTGGCGATCCCTATCAGTGTAATGTTTGCCAAAAAACGTTTGCTGTGCCTGCAAGACTGattcgtcactatcgtactcatacgggcgaaagaccatttgaatgtgaattttgtcacaaactattcagtgtcaaggagaatcttcaagtccaccgtcgcatacacaccaaagaacgtccgtacaaatgcgatgtctgcggtcgtgcatttgagcattctggcaaactgcatcgtcacatgcgcattcacacaggtgaacgaccccacaagtgttcagtgtgcgacaaaacatttatacagtcaggtcaattagttatacacatgcgcacacataccggcgaaaaaccttacaaatgtccggtagaaggttgtggcaaaggttttacctgctcgaagcaattgaaagtgcattcacgtacgcacaccggagagaaaccatatcattgcgatatttgcttccgcgattttggttacaatcatgtgctaaaattgcaccgtgtgcagcactatggttcgaaatgttacaagtgcaccatttgcgatgagacgttcaagagtaaaaaagaaatggaggcccatattaaggggcatgccaacgaaatgccCGATGATGACGAGGAAGTTAATGCCACCGGCAGCGGCACACAAACCTCGGTATCGACTTCTTCGGGGGCCGAAACAAATTCCGGTCCGAATTCGCCGCAATCGCCCAGCTCAAGCGTTGGCAACGCCACAACTACCACCACCACTTCAGCCGCAAACAGCAACTCAGCGAAGCCAGACAAGCAAAGAAAAGAAAAACAAGCCATTAGCCAGGCCGTAAGACCTACAAGCCCCAGATCTCCGGGTTCGCCCATATCTTCTTCTATGTCGCCTTCGTCTTCATACGCCTCCGGCTCCCGGCTATCGGCCGCCTCACCCACATCTTCTGTGGCTTCTCCCACCATGTCCTTGACTCTGGAGGCTGACCATCACAGTCGCGATAGTGGTGTAGCCAGCGCTTCAATACCTTGCAATAATAATCGCCAATTAGCCGCCGCCTCTTTAGTAGATTTAAGTCATCAGGGAAGTTTTCCAGCATCGGATGAAATGCCAACCGATTTAACTGTTACACAAAATCATCACATTAACGAGAAGCATAAATTCAAAATGCAGCAGCATCACCAGCCACTACAGACACCACTGCACGTTAGCTATCATTACCAAAGTTCTCCATCACCACAATATAAGACGCACAACATCTCACATCATCAGCAGCAGCAATATCATTATCCAAACACTCCAACGAGTCCATCACAGCACCACATAAGAGAAGTACATCACTCTGCCGTGGCGTCGAGTCCACAACATCACGCACTCTATGAACAGCAACAGCAACAACAGCAGCAGCAACAACAGCCCACCATAAATCCAGCTCTCTTAGAAGCTGCAACCATAGCAAGTCGTCGCGAAGAAGATGTCCAACAGGCAGCAATACAAATTATGCAACTACATAATTCTCAGCACAAACCGAATAGTAATAACATCTACAACGATTTCCAACAACAACAACACCATCACCACCACCAACAACAACAACAACAACAACACTTAGCGAACAACATGCATCACGACAAATCCCTAATAACACCCCAACAACATGACAACACGCACATCGAAATCGTAAAATCGATGGTAATGAACAATCTAAACGAGAATTTAATAGAACATTTTGCCAGAGATGAGCTGAGCAGGCATGTGACCGGATTCTCAAAAGGTTATGCACCGGTACCGAAATTCGAACCCTCGTTGCACGACAATGAAATAATCTTACGTCAGGTAGAGGCTGCCATAGCACCGTTAAGATCGTCCACCAACTCGCCAGATCGATCATCTTCACCCGAAAGTGATATGATGCTAATGGCCGACCGCGACGTCATGACGTTGCCGCTGAGAAAACGAAAACTCTATATGAGCGACTGCAATGAGGCTGGCGACCCTGAAAACAGCAATAACGTTGCTAAAGATCTCAATCACAAAGTTATGAGACACAGTTCGGTTATACAGTTCGCCAAGGCCTCATAG
Protein Sequence
MVYYPSTPLIIKSEQPSQAQICAPLRNHHELQHSTAQLQPMTNSSYMLNNVNITTIQHHQQQMSHNISSKTVTKTHHQTPQQTQQQQQQLPPQHLTNVKTELLPPGITLYATTQPASLTTKISATQSPAPTSTTNNVSSSTPVSTTSGARKPNTNKPQFKCEQCGMTFGSKSAHTSHTKSHAKKGELSLINSANCNTSGGVNSSAAVTGLELNEAGVPLGIPKTPQIKPNTNAATNGGDPYQCNVCQKTFAVPARLIRHYRTHTGERPFECEFCHKLFSVKENLQVHRRIHTKERPYKCDVCGRAFEHSGKLHRHMRIHTGERPHKCSVCDKTFIQSGQLVIHMRTHTGEKPYKCPVEGCGKGFTCSKQLKVHSRTHTGEKPYHCDICFRDFGYNHVLKLHRVQHYGSKCYKCTICDETFKSKKEMEAHIKGHANEMPDDDEEVNATGSGTQTSVSTSSGAETNSGPNSPQSPSSSVGNATTTTTTSAANSNSAKPDKQRKEKQAISQAVRPTSPRSPGSPISSSMSPSSSYASGSRLSAASPTSSVASPTMSLTLEADHHSRDSGVASASIPCNNNRQLAAASLVDLSHQGSFPASDEMPTDLTVTQNHHINEKHKFKMQQHHQPLQTPLHVSYHYQSSPSPQYKTHNISHHQQQQYHYPNTPTSPSQHHIREVHHSAVASSPQHHALYEQQQQQQQQQQQPTINPALLEAATIASRREEDVQQAAIQIMQLHNSQHKPNSNNIYNDFQQQQHHHHHQQQQQQQHLANNMHHDKSLITPQQHDNTHIEIVKSMVMNNLNENLIEHFARDELSRHVTGFSKGYAPVPKFEPSLHDNEIILRQVEAAIAPLRSSTNSPDRSSSPESDMMLMADRDVMTLPLRKRKLYMSDCNEAGDPENSNNVAKDLNHKVMRHSSVIQFAKAS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01376841;
90% Identity
-
80% Identity
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