Basic Information

Insect: Epicampocera succincta
Gene Symbol: -
Assembly: GCA_932527255.1
Location: CAKOBP010000080.1:818478-823333[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 3.9e-05 0.0025 18.3 1.3 1 23 426 449 426 449 0.95

2 14 0.00084 0.055 14.1 1.1 1 23 454 476 454 476 0.98

3 14 1.1e-05 0.0007 20.0 1.5 1 23 482 504 482 504 0.99

4 14 0.0036 0.23 12.1 6.6 1 23 510 532 510 532 0.98

5 14 0.00026 0.017 15.7 4.9 1 23 538 560 538 560 0.97

6 14 2.1e-05 0.0014 19.1 0.5 2 23 567 588 566 588 0.95

7 14 4.1e-07 2.7e-05 24.5 1.5 1 23 594 616 594 616 0.98

8 14 0.41 27 5.6 0.6 2 23 1042 1063 1041 1063 0.96

9 14 0.012 0.76 10.5 3.0 1 23 1069 1091 1069 1091 0.98

10 14 1.3e-07 8.2e-06 26.1 1.0 1 23 1097 1119 1097 1119 0.98

11 14 0.013 0.82 10.4 4.0 1 23 1125 1147 1125 1147 0.98

12 14 8.9 5.8e+02 1.4 4.3 1 23 1153 1175 1153 1175 0.86

13 14 0.00012 0.0079 16.7 0.8 1 23 1181 1203 1181 1203 0.95

14 14 1.6e-05 0.0011 19.5 3.3 1 23 1209 1231 1209 1231 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	3.9e-05	0.0025	18.3	1.3	1	23	426	449	426	449	0.95
2	14	0.00084	0.055	14.1	1.1	1	23	454	476	454	476	0.98
3	14	1.1e-05	0.0007	20.0	1.5	1	23	482	504	482	504	0.99
4	14	0.0036	0.23	12.1	6.6	1	23	510	532	510	532	0.98
5	14	0.00026	0.017	15.7	4.9	1	23	538	560	538	560	0.97
6	14	2.1e-05	0.0014	19.1	0.5	2	23	567	588	566	588	0.95
7	14	4.1e-07	2.7e-05	24.5	1.5	1	23	594	616	594	616	0.98
8	14	0.41	27	5.6	0.6	2	23	1042	1063	1041	1063	0.96
9	14	0.012	0.76	10.5	3.0	1	23	1069	1091	1069	1091	0.98
10	14	1.3e-07	8.2e-06	26.1	1.0	1	23	1097	1119	1097	1119	0.98
11	14	0.013	0.82	10.4	4.0	1	23	1125	1147	1125	1147	0.98
12	14	8.9	5.8e+02	1.4	4.3	1	23	1153	1175	1153	1175	0.86
13	14	0.00012	0.0079	16.7	0.8	1	23	1181	1203	1181	1203	0.95
14	14	1.6e-05	0.0011	19.5	3.3	1	23	1209	1231	1209	1231	0.98

Sequence Information

Coding Sequence: ATGGAAACTAAGGTAGAGAATCTCCAGAACTACGTTGACTACACGAAGTGTGGAGAAATATTTAAACCACCTTCCGAGGATTATCATCGCCCATATATTTTAAAATGCCTTCATTGCCACGAAACACATTTACTATTTGAAGCATTTATTCTCCACTTCGAAAACCATTGCAAAATGTTGCCAAATCATGGTTATGTTTCAGAAAATATTGAAATCCCTTCTGTACCGGAACACTTGGAATTGCTAGAGAAAAACGCTGTGAATATTAAAGAAGAAGAAAATAATATTTCTAACCAAATAGAGGATCCACTAACTGAAGTAAAATCTGAAACTCTTTCAGAAAATGATGAGCCTTTAACGAGAAATCCTGGGCTAATAAATCCCAAAGTCAACAGCGCGTCAAACAATAGTAATGAAAAACATTTTTTAAATGTGGAAGATCTTTGTGAATCAGACTCCTTCGAAAACTTGGACAATAGTGATGACGATTATCATCAAAGTAGTGAAAACGACGACTTAAGTAGCGATGAAGATGAGTTAAAGGCAGTAAAGCAACAGAAAAATGATGTGGACACCAGCTTTAAATCGAGTAGTTTTATTAAAAACTTTCTGGAAACAAAAGAAAAAGTGATTGCATTTATTGAAGCTTACAAGAGACAGACTTCTTTGTGGAATAAGAATTATCCATATTTGAAAACGAAACTGGAGCGTCAAAACTCTTTACAAAAAATAGCAGATGAACTCAATCAGCAACATGGCTTTTCAATTTCATGGGATGAAGTTAAGAATATCATTGTATATTTATGCCGAAAATATCGCAAGGATCTAAAATATTTAAAGGAAGTTAAAGAAAGTGGGAAAAACTACACACCGTCATGGTTTTTCGAAAATTTAAATTTCTTGAAACCTTTTATGGAAAAAAATCAAATTACGAAACTAGACTCCCATATGTCGGATTTATTGCCATATCAAATAAAAGAAATATTAGGAATATATAAGGAGCTTCCACATCTTTGGAATACAGAACTAATTGAATACTATTGTAAAAACAAAGTAGAATCTGCCAAACAAGAAATGCTGCAAGCATTGGAAGCGAAGTTGGACATAAGAATTACAGAAAATATACTAGACAGGTATATTCGTACTATAAATACCTGCTTTACCCACAAGGCATTGAACAAAAAAATTGACAAAAGCAGTAGTGGCTCAAATGAAGACAATATGCTTGATGATTATTACAAGTACATGCTCTTTCTAAAAGATCACGTGGGGCGCTTTGAATGCACCGAATGTAAAAAGTCTTTTAAAAACCCATTGTACTTAAAAATTCACAAAAATAATGCTCATGGACTGGAACCGTTTCCATGTTCTCAGTGCAAAAAGCCCTTCAAATCAGTCACAGCATACACAAACCATGCCAAACGCCATATGGAAGATCTCAATTATGAATGTAAAGAATGTGGTAAGAAATTTTTGTATTCGCAAGAATTAAAGATACACATGCGCAGACATAACGAAATAAAGCCCTACTGTTGTGAAATATGTGGGTCATCATTTCGACATATTCAAACTTTTAAAACTCACCAAAGACGCCATTTGAAAAATTACCTACATCATTGTGAACTCTGCGGCAAGGGGTACTATACAAAGGATAGTTATAAAAATCATATGAACTCGCATTCTAATACCCGTAATCAAGTGTGCAGTGTGTGTGGTAAAGCCTTTATAACGAAACATTCGTTAAGACAACATGTTGTCATTCACGACGAAATAAAAAGATTTCCATGTAAGTTGTGTGGCAAAACATTCAAGCAGAAAACTGGAGTAAACCAACACATGAGAACTCATGCTATTGCCAGCAGCGAAGAAAAAAATACGTTAAATTCAACTGGGTATATAAGATGTGGCGAAATATTGCAGTCTAAAAATGGCATTCAAAATCCGTACATTTTGCGATGTATAGAGTGTAAAGAAATTTACTTGTTACTGGAATCTTTCATATTTCACTTAAATGATACCTGCAAAAAAATTCGCAAAGACAAAAAATACGTAAAAGACAAAATACTTTACAGTTCTGATGAAGGCAAAGTGGTGAATGAACCTTTGGCATGTGAAGAACCCCCCGTTAAATTGGAACAAACTAGTGTTCAAATGGAAGATCCTTTGACTGTTATGAAAAATGAATGTGACATAGAGAGATCGGTTATTAAAATAGAGCCATGTCAGTATGAAGAAGTTATGAACAATGAAACAATTGATCATTTTGATCAAGTAATACCTACAAGCCAATATAAAGAAAATGATGATTTTAGTGAAGATGTGGATGACGTTGAAGCATTAACAGAGAGTCAAGATGAAAGCGAATCTCAAGCCTCAAATCCGGAGGTTTTAAAGATTATACAAAAACCAATTAACACTAATAGTGTGTCGTCATCTTTCGTTAGCAGTTTTATGAAATCGGATGAAAATTTGACCGTTTTAATAGCCGCATACAAAGATCAACCGGAATTGTGGAACAAAACTTTGCCACACTTTGGCAATAAACTTAAGAGAAGGGAATATATGATTAAAATAGCTGAAGATCTTAACATGAATCACAATATAAACATCAATGGTAGTCAGGTATCAGCGGTAGTTGTTCATTTGTATCGAAAGTATCAAGACGATTTGCACAGAGTTCAAGACAAAGATGAGAGCAAAAAACAACAATATGTGAAGCCCTGGTATCTAACTCAACTTAGTTTTATTGAACCTCATTTGGAAAATTATTCTTTGGAGATGTTAGATTCGAATCATACTATACTGTCGGCAGAACAAATTGTAAAAATTTTGCAAATATACCAGCATTTGCCTCATCTATGGAATTCTAATCTTATAGAAAATCATTGCAAAAATAAGCGTCATGAAAGTATAGTGGAAATGCTTAATCAGCTAGAAACTAATATGGATTTGAAAATTACTGAAAACATATTGGAGCAATATTTACGTACAATTCATACACATTTTTCCAGGGAAAAGCGACGTATTTTAAATGTTAAAAAATCAAATAAATATAATAATGAGCAGAAAAATAGTAATTACTACGAGCAGTTAAAGTTTCTATATGATCATGTTCCTCCGCTGAGATGTTCTGTATGTGGTGCTGATTCCATTAGTCCACTACATTTTAAAATGCATACGTCTTCTCATGCCGGTACAATTCCCTTTACCTGCTCCCAATGCAATAAGCAATTTAAACGTGTAAATGTTTATACCAGTCATGCAAAGCGCCACTTTGAGGATCTTAATTATATATGCAAAGAATGTGGCAAGAAGTTTGTTAATTACACTAATTTAAGATTGCACATGCGTATTCATACCGGCGATAAGCCCTATTGTTGTGAAATGTGCGGCGATTCATTTCGTTTTCTACAAACATTAAGTAACCATCGCAGACGACATGAAAAACGTTACCTACATACGTGTAAGATCTGCTCCCAAGGATTCTATTCGAAAATGAGGCATGATGATCATATGAATTCTCATAATAATATTCGCTCTCATGTTTGTGATATTTGCAGCAAAGCATTCATTACAAAAAGAGCCCTTAAACAGCATAAAGTAGTTCATGAGGATATTAGAAATTATGCATGCAGACTATGCGGTAAAACGTTTAAACACAAAACCGGTGTCAATCAACATATGAAAACACACGACATTGCAACCACTGAAGAAAGAATGATTGTTCAATAA
Protein Sequence: METKVENLQNYVDYTKCGEIFKPPSEDYHRPYILKCLHCHETHLLFEAFILHFENHCKMLPNHGYVSENIEIPSVPEHLELLEKNAVNIKEEENNISNQIEDPLTEVKSETLSENDEPLTRNPGLINPKVNSASNNSNEKHFLNVEDLCESDSFENLDNSDDDYHQSSENDDLSSDEDELKAVKQQKNDVDTSFKSSSFIKNFLETKEKVIAFIEAYKRQTSLWNKNYPYLKTKLERQNSLQKIADELNQQHGFSISWDEVKNIIVYLCRKYRKDLKYLKEVKESGKNYTPSWFFENLNFLKPFMEKNQITKLDSHMSDLLPYQIKEILGIYKELPHLWNTELIEYYCKNKVESAKQEMLQALEAKLDIRITENILDRYIRTINTCFTHKALNKKIDKSSSGSNEDNMLDDYYKYMLFLKDHVGRFECTECKKSFKNPLYLKIHKNNAHGLEPFPCSQCKKPFKSVTAYTNHAKRHMEDLNYECKECGKKFLYSQELKIHMRRHNEIKPYCCEICGSSFRHIQTFKTHQRRHLKNYLHHCELCGKGYYTKDSYKNHMNSHSNTRNQVCSVCGKAFITKHSLRQHVVIHDEIKRFPCKLCGKTFKQKTGVNQHMRTHAIASSEEKNTLNSTGYIRCGEILQSKNGIQNPYILRCIECKEIYLLLESFIFHLNDTCKKIRKDKKYVKDKILYSSDEGKVVNEPLACEEPPVKLEQTSVQMEDPLTVMKNECDIERSVIKIEPCQYEEVMNNETIDHFDQVIPTSQYKENDDFSEDVDDVEALTESQDESESQASNPEVLKIIQKPINTNSVSSSFVSSFMKSDENLTVLIAAYKDQPELWNKTLPHFGNKLKRREYMIKIAEDLNMNHNININGSQVSAVVVHLYRKYQDDLHRVQDKDESKKQQYVKPWYLTQLSFIEPHLENYSLEMLDSNHTILSAEQIVKILQIYQHLPHLWNSNLIENHCKNKRHESIVEMLNQLETNMDLKITENILEQYLRTIHTHFSREKRRILNVKKSNKYNNEQKNSNYYEQLKFLYDHVPPLRCSVCGADSISPLHFKMHTSSHAGTIPFTCSQCNKQFKRVNVYTSHAKRHFEDLNYICKECGKKFVNYTNLRLHMRIHTGDKPYCCEMCGDSFRFLQTLSNHRRRHEKRYLHTCKICSQGFYSKMRHDDHMNSHNNIRSHVCDICSKAFITKRALKQHKVVHEDIRNYACRLCGKTFKHKTGVNQHMKTHDIATTEERMIVQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -