Esuc015275.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Epicampocera succincta
Gene Symbol
-
Assembly
GCA_932527255.1
Location
CAKOBP010000080.1:641101-650112[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 0.0063 0.41 11.3 0.9 1 23 217 239 217 239 0.97
2 25 0.00072 0.047 14.3 0.7 2 23 250 271 249 271 0.97
3 25 0.00017 0.011 16.2 0.4 1 23 277 299 277 299 0.92
4 25 9.2e-05 0.006 17.1 0.5 1 23 305 327 305 327 0.96
5 25 0.00085 0.056 14.0 0.7 1 20 334 353 334 355 0.94
6 25 0.0036 0.23 12.1 2.4 1 23 497 519 497 519 0.98
7 25 6.7e-07 4.3e-05 23.8 1.6 1 23 529 551 529 551 0.99
8 25 0.00018 0.012 16.1 0.6 1 23 557 579 557 579 0.92
9 25 5.7e-05 0.0037 17.7 0.1 1 23 585 607 585 607 0.96
10 25 0.0003 0.02 15.5 1.4 1 23 614 636 614 636 0.96
11 25 0.0034 0.22 12.2 2.7 1 23 707 729 707 729 0.98
12 25 2.4e-06 0.00016 22.1 0.5 1 23 736 758 736 758 0.99
13 25 0.0004 0.026 15.1 0.3 1 23 764 786 764 786 0.95
14 25 7.8e-07 5.1e-05 23.6 0.2 1 23 792 814 792 814 0.98
15 25 0.0021 0.14 12.8 3.6 1 23 821 843 821 843 0.96
16 25 1.2e-05 0.00081 19.8 1.6 1 23 849 871 849 871 0.97
17 25 0.00022 0.014 15.9 3.6 1 23 877 899 877 899 0.99
18 25 0.0026 0.17 12.5 1.8 1 23 961 983 961 983 0.98
19 25 7.3e-06 0.00048 20.5 0.5 1 23 993 1015 993 1015 0.98
20 25 1.7e-05 0.0011 19.4 1.5 1 23 1021 1043 1021 1043 0.92
21 25 2.9e-06 0.00019 21.8 0.1 1 23 1049 1071 1049 1071 0.97
22 25 0.00014 0.0092 16.5 1.1 1 23 1078 1100 1078 1100 0.96
23 25 7.2e-06 0.00047 20.6 1.0 1 23 1106 1128 1106 1128 0.98
24 25 3.1e-06 0.0002 21.7 3.5 1 23 1134 1156 1134 1156 0.99
25 25 0.12 8.1 7.2 0.3 1 23 1162 1184 1162 1184 0.95

Sequence Information

Coding Sequence
ATGCCTAAAGAAATGAAGACACGTATGTGTCGCACTTGCATGCTTAATAATGCAGACCAATCTTTAACACAAGCAGATTACGGGTATAAAGAGGAATCAAATGAAGTAAAAATGCTTTCAATACTTAATGTCCCTGAAGAAATCAAGGAGCAAAATCTTAATTTCAAACAATTATTGAGAGCTATAATGCCCCAACTCAAATTCGAAGAAAAAGATAAGTTGCCAAAGAAAGTGTGCCACGGTTGTTCAAAAAATATTATACATTTTTACAATTTCCACCTGATGTGTTTAGAAAGCGAAGAAAAGTTGTTCAAGCTCTTAGAATTTGGTGAAGACAATGAAATTTTAAGCTGTTTGGACAATACCAATGTCAAACCTGAAATATTAAAAAATAGTTTTAAGCAAAACGGTTTATTGGAACATACTGAGGAGGAAAAGGAAACTAAAGATGCATATTGTTCCGAAGACGACAGTAATAGGTCTGATATAAATTCACCAAAAGCTATTCACGATAGTAATTGCAGTCCTGATGCTGGAAATGGAAAATCTGTTAAGAAAAAAACAAAAAGAAGCGTTAAGAAAAAACTGAAGCAAACTTCCTCTTCAAAAAGTTCAACTAGGTCCGTAAAGCGTAACCCCAAAGAGCTGTACTCTTGCGGTAAATGTCAGCGGAAACTAAAATCGGAAATATCGCTTATGAAACATCAAGAATTGCATTTGAAAAAAGATATTGAGGAAAAAGATTTAAAATGCAGCGCTTGTAATCAAGTTTTTACAGATGTAGTCACATTTAAAGAACACCAACGCACACATACATCTGGAAAAACATTTTTATGCTCGGAATGCGGAAAAGGTTTTGCTTCAGCCGGTAGCTTAAAACAACACTCTTTTCGCCATTTAGAAAAAAAACTTTATGCCTGCCCATATTGTCCTAAATCATTTCCCACCAATGGCGATCTTATTTGCCATTATGAAACTCATAAAGCTAAGCCCCGAATACACGTTTGTGATAAATGTGGACGTGGTTTCTATAAACCGTTTCTCTTGAAGCAacatcagagTGAAAAAAGGTTGTATAAAATGTTAGAAGAACAGGTAGATGACGCCTTCAATGACTTTAACGATCCTGAAGATGATGTTTTTAAGACTGAATTTGATGATTCTTTCATTGAGGAAAATTCTATGAAATCGGACGAGGAATTAATAATGGAAGAAGAAATAAATAGAGCTGCTGAAGCAAGCGAAGAATTCATTGAAAGTTGTAGTGATTTAAGTATCGATTTAGTTTGGGACGATGAAAATACAGACACAGAATGGGATCCAAAAACGATTGCAAGAAAATCCAGTACTGAACTAATTGATGAAGATATATTCAACATTTTTTGTGCGGATGAAAAAAAGGAGGGTGATTGTGTTAGAGATGATGATAAGTTTAAAACAACATCAAAAAAATCTGGCATAACAAAAGAAATGATTGCTACAGGAGTTTATCCGTGTCCTAGATGCAAGAGAAAATTAAAAACAAAATTATCATTTTTAAAACACCAGCAAATGCATGAACAAAAAGACAACGAGGAAAGGCCTTATGAGTGTAATATTTGCAGCAAAGTTTTTCGTTTTAGCTCTATGCTGAAAGAACATCAGCGGTCACACATTGGTGAACGTCCATTTCTGTGCTCCGTTTGTGGGAAAGGATTTGCATCCTCAGGAAGCCTGAAACAACATTCATTCCGCCATTTAGAGGAAAGGCAATTTCCCTGTCCAGACTGCCCGAGATCTTTTCCTACCAAAACCGACATGCTTTCCCATTATGATATTCACAAGGCCAAACCAAGAAATCATATATGCGATGTTTGTGGCCGAGGATTTTATAAGCCATATTTGTTAAAGCAACACAAAATGTATCACAACAATGAGCGACCATATGCTTGCGAATATTGTGATAAACGTAAAACTAAAAAACCGAAACGTTCAAAAACAAGCCAGTGTACTGATGTTAAAATACTCATTAAGGAGGAAGCAAATGAAACAATTAACTGCCATCCGCAGAATAAAAAACCGGCACCCAAAAGAATCAAATACATAAAAGAAAAACAAAATGAAGGAAAACACCAGTTTTATCCCTGTAATAAGTGCAAACGAAAACTAAAATCTGAAATGTCGTTTAAAAAACATCAAGAAATGCACAACAATAAAGAACAAACTTACAGATGCTCAATATGCCAAGAAGTATTTGGAGAGAGATCTTTGCTAAAAGACCATATGAGGACGCACAGTGGTGAAAAGGTATTTTTGTGTTCACAATGTGGCAAAGGATACACCACAGCTGGTGGCTTGAAAGAGCACTCAAATCGTCATCGTAGTGAAAAAAACTTCTCCTGTCCCGATTGCCCGCGCTCGTTTACTACTAAAACTGATTTAGTCTCACATCAGATAATACACAAAGCTAAACCCAAAAATCATATTTGTGATATATGCGGTCGGGGATTTCACAAACCTTTTCTTTTAAAGAAACACAAAATGTATCATAATAATGACAGACCATTTGCCTGTGAGTTCTGTGAAAAACGTTTTGTGACGAATGAAAAACTGAAACGCCACACGCGCATTCATACCGGCGAAAAGCCTTACAAATGTAATTATTGCAAAAACGCTTACTGTCAATCGAACGAATTAATAAAACACTTGCGCTTGCATTTGGGTGAAAATGTCTATCAATATAAATCTAAAATTCTCAAAAGGGAAGAATTTGATGATGAGGTATTTGAATCGGTTGCGTATGACGATGAGGATGAGGATGTGAAAGACGATATTGACGATGAGGACTTTGAGGACTTTGATATAAAAACAGAAAATAAACAGATATCTATGGAACATCTTTACCCTTGTGAAAGATGTAAAAGAAAACTGAAATCAAAGCTTTCTTTAAAAAAGCATTTAGAAATGCATGCAAAACGTGATAATGAGGAACCGAAATTTATATGTAATATTTGTGATAGAGGTTTCTCACAAGGATATATGCTTAAGGATCATCTGCGCACGCATAGCGGTGAACGGCCATTTTTATGCTCAGAATGTGGTAAATCATTTTCATCATCTGGCAGTTTGAAACAGCACTCATTCCGTCATTCAAATGAAAAACAGTTCCCCTGCCCAGACTGTCCAAAATCTTTTCCAACTAAAACTGATTTAGCTTCTCATTATGATGTTCATAAAGCAAGACCAAGAACGCATATTTGTGATATTTGTGGTCGCGGCTTTCCGAAACCGTTTCTTTTGAAGAAACATAAAATGTATCACACAAATGATCGACCGTTTTCTTGCGAATACTGTGCTAAACGctttataacaaacgagaaactacagcgtcacgttagaattcatactggagaaaagccatacaagtgcaattattgtgaaaaggcctactgtcaatcgaatgaattaaccaaacatttacgaattcatttgggcgataatgtttatcaatgcgaattgtgtcctctaagatttccgacagttaaagtggtgcgtgagcatttctccacgcataaaaacgatgatgaagaaacTAAAGTTCGGAATTTAGCAGAGCTTAATGCTATGGCATTAAAAGGAATTTATTGTAGATAA
Protein Sequence
MPKEMKTRMCRTCMLNNADQSLTQADYGYKEESNEVKMLSILNVPEEIKEQNLNFKQLLRAIMPQLKFEEKDKLPKKVCHGCSKNIIHFYNFHLMCLESEEKLFKLLEFGEDNEILSCLDNTNVKPEILKNSFKQNGLLEHTEEEKETKDAYCSEDDSNRSDINSPKAIHDSNCSPDAGNGKSVKKKTKRSVKKKLKQTSSSKSSTRSVKRNPKELYSCGKCQRKLKSEISLMKHQELHLKKDIEEKDLKCSACNQVFTDVVTFKEHQRTHTSGKTFLCSECGKGFASAGSLKQHSFRHLEKKLYACPYCPKSFPTNGDLICHYETHKAKPRIHVCDKCGRGFYKPFLLKQHQSEKRLYKMLEEQVDDAFNDFNDPEDDVFKTEFDDSFIEENSMKSDEELIMEEEINRAAEASEEFIESCSDLSIDLVWDDENTDTEWDPKTIARKSSTELIDEDIFNIFCADEKKEGDCVRDDDKFKTTSKKSGITKEMIATGVYPCPRCKRKLKTKLSFLKHQQMHEQKDNEERPYECNICSKVFRFSSMLKEHQRSHIGERPFLCSVCGKGFASSGSLKQHSFRHLEERQFPCPDCPRSFPTKTDMLSHYDIHKAKPRNHICDVCGRGFYKPYLLKQHKMYHNNERPYACEYCDKRKTKKPKRSKTSQCTDVKILIKEEANETINCHPQNKKPAPKRIKYIKEKQNEGKHQFYPCNKCKRKLKSEMSFKKHQEMHNNKEQTYRCSICQEVFGERSLLKDHMRTHSGEKVFLCSQCGKGYTTAGGLKEHSNRHRSEKNFSCPDCPRSFTTKTDLVSHQIIHKAKPKNHICDICGRGFHKPFLLKKHKMYHNNDRPFACEFCEKRFVTNEKLKRHTRIHTGEKPYKCNYCKNAYCQSNELIKHLRLHLGENVYQYKSKILKREEFDDEVFESVAYDDEDEDVKDDIDDEDFEDFDIKTENKQISMEHLYPCERCKRKLKSKLSLKKHLEMHAKRDNEEPKFICNICDRGFSQGYMLKDHLRTHSGERPFLCSECGKSFSSSGSLKQHSFRHSNEKQFPCPDCPKSFPTKTDLASHYDVHKARPRTHICDICGRGFPKPFLLKKHKMYHTNDRPFSCEYCAKRFITNEKLQRHVRIHTGEKPYKCNYCEKAYCQSNELTKHLRIHLGDNVYQCELCPLRFPTVKVVREHFSTHKNDDEETKVRNLAELNAMALKGIYCR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-