Esuc001331.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Epicampocera succincta
Gene Symbol
lov
Assembly
GCA_932527255.1
Location
CAKOBP010000006.1:5437281-5453956[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.4e-18 5.5e-15 54.9 0.0 1 44 804 847 804 848 0.96

Sequence Information

Coding Sequence
ATGTTAAAGGAATCAGAGGAAATCATTAAAAGGCGCAAACTGTCGTTGACGGCAGATACGGCAGCTTACGAAGAATTAAATCGTAACGCTGCCTTAAACGCCACACTTCTGCCGCCCCTGCCATTTGCTAACGCCATGGCCTTGGAAACCGAATGCTCCGAAGCGTTGGCTTTGACAACCACCGCTTCAGCCACAGCACCCCTTTCAACACCAAATATGACCAACGCAATTAACACTTCAGAAGCTTTAAATACACACACCGCTAACAGTATTTTTAATGCGTTATTGGCCAACAACGTGACCACCAGACCGGCAGCTTCTATACCTGACCACTACAgcttaagatggaacaatcatcagaatcacctgatgcgcgcttttgatgcgctgctgcagtcgaaaaccctggtggatgttactctcgtgtgtgcagagaccagcatacgggcccacaaaatggtcttgtccgcctgttcgcccttctttcagcgtgtctttgccgatactccctgtaagcatccagtcattgttcttaaggattttcggggctgggtggtgcaagccattatagattttatgtatcgcggtgagataagcgtaccccaggagaagttgcacactctaatagatgcaggagagtcgctacaggtccggggcttagTTGAAAGTTCCATACCTGAACATTCGCCAGCTACTCCAGCCGCCTCCCCTGATGATTTCGGCATGATTGATACCTCGCTGTTGTCCTCCGAGTTGGGCAGGTGTTCCAGCTTCGATGAAGAATCTCCCTCCATGGTAACGGCTGGCTCCAAAATCATTTTGCCTTCACGCTTATTTGGCTCTGCTTACCGGCGTGACAAAGAGCAACGCAAGAGGGAAAAGGAACGTGATTTGGAACATGAGCTGGAAAGTGATCATGAACTGCTCAACGACTCTCTGAGTCACAATGATTTGTGCACCTCCCCCATGCCCAGACGAAAACAGGCCCGGCCTAGAAGGAGGTCAGGAGAACTGAGCCATGACGTGATGAATAAACCTGTTTTGGAGTGTAACGATCAACCTGAAGACCTTTGTAAGGACTCAACTACGCTGGAAACGCTAGAGCAAGATACACCCAATCAAACAACAACTGAAAACATAATTGAAAATCCTTTGAAAACTGTGATTAAATCGGAGCTAGCGGACGCTATGGAAGAAGATGAGGATCAAGTGGGCGAACGTGATAGTGGCAATGACAGCCATGAACAGCCTGAAGATCTCATAGTGACTGATAAGTCGTTGGAAAATAATTTAAATTTTACACACACTTCGTCCGCGGCTTTAAATAGCATAGAGGAAACCCTGGAAGAGGGTGACGAAAGAGAACCTGAAGAAGAGCCACAAGAAGAGGAGGAAGAGGAAGAAGACATTGAACAGCTAATCCACCACACCAATGAGCTTAACAGAAGACGCAAATCGGCCTTGTCTATGAACTCTGATGGACCCGAAGATTTGTGCACCACCAAAAAAGACAACGACACCAGTGGCCACCATTCGGCCTCTGATAATGAAGACTCAACCAACAATAATAGCAGTAAATTAAATAACAATAATCGCATTGTATTATCGCTAAAAGATATACGTCAATTGAATAAACCCTCCTCCTCATCTACACCCAATTCCGCCAACAATAGCATTAATCCTTTTTCCACGGCCAGCCTCCGAGACTTGAGGCTGGATCGAGATCGCGTCTTAGAAACACACTGCAAAATGGAGGTTTTGGAAGCTCAAATGCAGGCAGCTGCAGAAGCGGCCGCCGCCGCTGCAGCTAGAGGGGAAAATCCTTTTCAACATATGGAACATCAAATGGATCTATCGCTGGCGGCGGCTGCCGCAGCTGCTGCGGTCTCCCAACAGCACTCGAGAGAAAGAGATCAGGCTTTGCAACGGGAGCAAAGAGAAATGCAGCAACACACTGCTTACGCAAATAGTATTCTGGGGCAAATGGGCATGCCGGGCATACCACCGTTTGGACCTCCTGGCGCTGGAGGCCCTAACGGACCGGGTGGACCATCGGCACACGAACGTCTAGAAGAATCCATGAATCGTTTGAGCAAAGAATTTACACCGACTTCACCCATGAGCCTGCCGCCACATTTCAATACGCAAGATGGTCCACCACATCCACCCTCTCCGCTGCCCTTTCCTGGTATGTCGTCATTGGCGTTAACTCCGCCGCACATGTTTGGCCTAGATTCGCCATTGGGCTTATTTCCGCCTGGCATAGATCCCGGTAAATTATATAATCCGCTAATGGAAATGTCCGATCCCAGAGGTATGCCAGGCGATGCGCCGCCGTTCCTGAAAAAGAAAATGCCTAGACCAAAAGGTCAGCATTCTGCACCAAGAGGCGGACCACCCCGTTCCTGGACAAATGCCGAACTGACGGAGGCCTTACAGCATGTTTGGAACAAGAAAATGACCACGTCGCAGGCGTCTCGCATCTTTGGCATACCCTACAACTCGCTGTTAATGTATGTGCGCGGCAAGTATGGCAAATCCTTGAAATTGGAGCAGTTGCGCAAGGACTGCATAAGTGGGCCTCCGTTGGAGATGCTGCAAATGGGCATAAGCTCTAGTTCGGGCAAGAACTCAGGTGAGAGTAAGGAACAAAGGGAGGCCCGCAAGGCGGCCCAGCGCAATGCCAATCAACACCCGCCCAATGATTTGGATTTGGGAGGTCCCTTGGAGGGACCAGGACCCCGACCCTCGAGCTCAGAACCTGATCTGTTGGGTGGGCCCAATGCTCTATTTAATCCCTTTAATCCCCAGGGCTTCTATCCAGACTTTCCGGGCGGATTTCCTGGCCTGCCCTTAAGCATGTTGAACCTGTTGCCGCCGTCGGAAAGACAACATGCTGCCGCTGCAGCCGCTGCCATGCATCATTCTATGGGTCTGGACGAAGACTGTAAATCTGATCGTTCCAAACAATCCTCCAACATGGATGATGAATTCTCCCTGTCGCGAGAAGAACGCCGGCATTCCGATTTAATGAACAACTCTTCGAACTCAACGCAGCAAAATGGTTCGGTGCAAGATTGA
Protein Sequence
MLKESEEIIKRRKLSLTADTAAYEELNRNAALNATLLPPLPFANAMALETECSEALALTTTASATAPLSTPNMTNAINTSEALNTHTANSIFNALLANNVTTRPAASIPDHYSLRWNNHQNHLMRAFDALLQSKTLVDVTLVCAETSIRAHKMVLSACSPFFQRVFADTPCKHPVIVLKDFRGWVVQAIIDFMYRGEISVPQEKLHTLIDAGESLQVRGLVESSIPEHSPATPAASPDDFGMIDTSLLSSELGRCSSFDEESPSMVTAGSKIILPSRLFGSAYRRDKEQRKREKERDLEHELESDHELLNDSLSHNDLCTSPMPRRKQARPRRRSGELSHDVMNKPVLECNDQPEDLCKDSTTLETLEQDTPNQTTTENIIENPLKTVIKSELADAMEEDEDQVGERDSGNDSHEQPEDLIVTDKSLENNLNFTHTSSAALNSIEETLEEGDEREPEEEPQEEEEEEEDIEQLIHHTNELNRRRKSALSMNSDGPEDLCTTKKDNDTSGHHSASDNEDSTNNNSSKLNNNNRIVLSLKDIRQLNKPSSSSTPNSANNSINPFSTASLRDLRLDRDRVLETHCKMEVLEAQMQAAAEAAAAAAARGENPFQHMEHQMDLSLAAAAAAAAVSQQHSRERDQALQREQREMQQHTAYANSILGQMGMPGIPPFGPPGAGGPNGPGGPSAHERLEESMNRLSKEFTPTSPMSLPPHFNTQDGPPHPPSPLPFPGMSSLALTPPHMFGLDSPLGLFPPGIDPGKLYNPLMEMSDPRGMPGDAPPFLKKKMPRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCISGPPLEMLQMGISSSSGKNSGESKEQREARKAAQRNANQHPPNDLDLGGPLEGPGPRPSSSEPDLLGGPNALFNPFNPQGFYPDFPGGFPGLPLSMLNLLPPSERQHAAAAAAAMHHSMGLDEDCKSDRSKQSSNMDDEFSLSREERRHSDLMNNSSNSTQQNGSVQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00922026;
90% Identity
iTF_01376557;
80% Identity
iTF_00655409;