Esuc009145.1
Basic Information
- Insect
- Epicampocera succincta
- Gene Symbol
- bab2
- Assembly
- GCA_932527255.1
- Location
- CAKOBP010000034.1:10301113-10302966[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3.4e-07 0.00055 19.7 0.0 5 38 394 427 393 430 0.89 2 4 2.8e-14 4.5e-11 42.4 0.0 5 44 448 487 445 488 0.93 3 4 0.014 22 5.0 0.0 27 38 517 528 513 534 0.88 4 4 3.7e-15 5.9e-12 45.2 0.0 4 41 556 593 556 595 0.92
Sequence Information
- Coding Sequence
- ATGAATCACTTAAAGTGGATGGGGCATTCGGCCACAATATTAGATATACATAAAAATCTACGAGCAGATTTGAAGAGCTGTGAAGTAACATTAGTGGCCAAAGGACACAGCGTGAAGGCTCACCGTTTTGTTCTATCGTCATGCAGCGATTTGCTGCGCTGCCTTTTATCAGATATTCCCATTGGTCAGGAGTGTTGTCTTATGGTTCCCGACATCAAAGGCCATTTATTGGACAGTGTTTTAGCTTTTATATATCTGGGAGAATGTTCTCTGTCCTCTACTAACTTATCCGAATTTTTAGAAGCCATCAATGTGTTGGGCATTAAAAGTGCTATTAGTTTTGAGTGCAATACAAATGCTTTACAGGCGGCCCAAAATAGTACCATCGCTTTAGATAGCGACACAACCATGGTACCAGTGAGTGGAACAGGGCTGTCTAACACGCAGGTTGCAGTGGCAGGCTCAGGCAATTCGCTACAACAGGAAGAAATAATTGAAACACAAAATGTTATTCATAACGAGGCTAATAGTGCAGATACAAATAGCGCTAATAATTCGACTGCAAATAGAGAACTTGACTTTTTAGATGTATATCATGAACCTCAACACAAGATCACGTACTCAATAGAGCATGTTCCAGGATCTACGACTGGCAATGAATTTATTTTAACTGAAAACTCTGGCACTTTTACACTAACTCACAGTGGTAAATTGGAACCCACTACATCTCCGGCTGAATCAACAAACATGGAAGTCACTGAAGATGACGGTTGTGATTCTCATATAATCGAAGAATACAGCAGCGGTGATGAGCCACTAATTCATATTGGTGAGGCTGGACAAGAACAACAAACTGTAACGGTAACTCAAACAATTGCCCAGCAACATCACCAGCAGCACACGACGCCGCTTGTTTCTAGCACGCCGACTACAACCTCAATTATACAAGTCAAACCTAAAATAAAAACCCTTAAAATAAAACACCCGCAGGCTACTCAAAGAATAATTACTAAAATGGAACAACTTTCCGAGGATACGGGCAGCGACGATCCCATCTCAATATTACAGACTTCAAATGAAAGTTTTACCTTATTAAAAGATGCCTCAATAATATCCACAAGCAACACTAGTCATGACGAATCCACAGATTTTTCTATGAACAACACAGCTACACCTGCGATTGAATTGGCCTACCAAGCCATGGTCAATGAAGGCGTGTCGTTACCGAAGGCCGCCGATAAATTCAATGTTTCAAAAGCGGAACTCTGGCGGCGAGTGCGCAGTAGCGGAATTGAACAAGTCAACAAATCGGTTAAAATGGATCCTGACAAAATTGATGTCATAGAGCTGGCTAGTAAAGCGGTAATCAATGAGGGCTTATCATTACAAAAGGCTGCTATCCGCTATGACATCTCCAAAACCGTTCTGTGGCGCAGAGTCAGAAAGCACCCGCAATATATGAAGACAGCAAGAGAAAACCCGATTATAACCAAAGCCTATGAACGCCTAAAATCTGGGGAATCACTTAAAAGCATATCTCAAGACTTAGACATACCCATGTCAACTTTGCACCGCCATAAAGTGCGTCTATCACAAACTGGTCAGTTGCCTGACTTTGTGACGTGCAAAAAACGTGACAGTATGTCCAAAGATGATCTTAAGTTGAAGCTTTCCAAGGCAGTGCACGCTTGCGTACATGAAGGCATGTCCCAAAATCATGCCGCCAATATATTCCAAATTTCGAAAAGCACACTGTGGCGACATTTACAAAAACGTGTAGCTGAAGCCGAAGCAGCCGAGACCGAATCCATTGGCGATGAAGACGAAATTAAGCAGGAAGTTATTCTTTCATAA
- Protein Sequence
- MNHLKWMGHSATILDIHKNLRADLKSCEVTLVAKGHSVKAHRFVLSSCSDLLRCLLSDIPIGQECCLMVPDIKGHLLDSVLAFIYLGECSLSSTNLSEFLEAINVLGIKSAISFECNTNALQAAQNSTIALDSDTTMVPVSGTGLSNTQVAVAGSGNSLQQEEIIETQNVIHNEANSADTNSANNSTANRELDFLDVYHEPQHKITYSIEHVPGSTTGNEFILTENSGTFTLTHSGKLEPTTSPAESTNMEVTEDDGCDSHIIEEYSSGDEPLIHIGEAGQEQQTVTVTQTIAQQHHQQHTTPLVSSTPTTTSIIQVKPKIKTLKIKHPQATQRIITKMEQLSEDTGSDDPISILQTSNESFTLLKDASIISTSNTSHDESTDFSMNNTATPAIELAYQAMVNEGVSLPKAADKFNVSKAELWRRVRSSGIEQVNKSVKMDPDKIDVIELASKAVINEGLSLQKAAIRYDISKTVLWRRVRKHPQYMKTARENPIITKAYERLKSGESLKSISQDLDIPMSTLHRHKVRLSQTGQLPDFVTCKKRDSMSKDDLKLKLSKAVHACVHEGMSQNHAANIFQISKSTLWRHLQKRVAEAEAAETESIGDEDEIKQEVILS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00199788;
- 90% Identity
- iTF_01376760;
- 80% Identity
- iTF_00655431;