Basic Information

Gene Symbol
grh
Assembly
GCA_932527255.1
Location
CAKOBP010000045.1:164439-213032[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.046 4.5e+02 0.1 0.3 56 115 156 216 108 245 0.74
2 3 0.11 1.1e+03 -1.2 1.8 93 109 288 304 262 338 0.58
3 3 9.4e-64 9.1e-60 201.8 0.4 24 221 640 832 626 834 0.94

Sequence Information

Coding Sequence
ATGGCGTTTTCCACATGCGGAATACGGGAGGTACCACACCGGAAGCGACGCCGCACTGTTCTAACGAATGGGGACTCACTAAACTCCGGGTCAACGTCACCAACGCCATCGACTGCATCGTCGCAAGCACAAGCCCTGACCATGCCGGCGCATCACCAGAGCAGCCCCCATGAAGTTATAATACATCAGCACAATGGGAATTCTTATCAGCTGCCGGCATCATCGGTCGCACCACGCTACTTTGAGCATCCCCAACTGGCCACCGTTGTGTCTGCAGCAACACCCCAAACTCTGATCAGTCTTTCGCCGCATGACGGCGCCACACACCCccatagtcaacaacaatcggacgatccgaacggcagcgttggtatgcagcaacaacagtcacatcatcaccagcagcagcaacaacaacaacatcaccagcatcaccagcatccccagcatcagttaattgaagctgctgccacaacagTGAACTTAAGTTCACTGGGGACACCTCAGCTGCACCAGGTTCAAACGTCGAACGGCACAACTTCGTTCGTTTACGAGTATTACAAGATGCCGGAAAAGGATGCCACTTCAACGGAAGCGGATCTTCATTGGAGGGAGCTGAAAAAGGGTAAAAAAGAAGTTGTGCTTAATCCCGGCTTAATGAAATTGATTCCCATCCAGTCGCATCTCATCTCATCGCATCATGGCAATGCAGGCCATGAGCGAAGCAGCGTAGATAGAaacgagatacaaggcctgctgcttggctcacacccatcagcaacaacggctgctgtggcggctgctgccgcaagtgtcaccgccacatcaactctggcacaacaacaacaacaacagcagcagcagcagcagcagcaacaacaacaacagcagcatcagcagcagcaacaacaacaacagcagcaacaacaatcaaccatagttagtgcagctggtggaggttcgggtacagtggtcataacagctgatcaacatcgtcaacaggcggccacaacaacaataaacattaaaagggaaccggaagacttgcGAAAAGATCCTAAAAACGGTACCGCTAGTAATGGCTCAACAGCCAGTAGCGGTCAAAAGGTCATTGTGTTACAACAATCTCCCTCGCCCACACACATTCATATCAAAGAACCGCCACTCAGTCCTGGAAGCCCCACAAATCATACAGAAGCCATGTACGCTGCCGGCGGCGGCACTCAAATTTATCTGCAGGGGCCACATCAAAACTCAGCAGCTGGACCTGGCGGCAATGTAAACACACAAACACCCAGCCCGGGTCCATATATTGGAGCCGACGGCTACGGCATGTACACAACCAGTCGTTTGACCACAGCCCCCACAACAACATTCATTTCGGAACCGTACTATCGTGAATATTTTACAACAACAGATGGGCAAGGTTACGCACCGACTCGCACCATTTATGGCGACAGCGAAGGCCCTCAGCCTGGCACAACTTACGAAGGACGTTTCAGTACATCGAGCGCCAGCAGCGGTGTGCCACCTCCCCATCCATCCGCGAACATCTCAAAGAACAACGGCGGCACTCCCATTTACGCAAAAACAGTAACAGCAGCTGGCCTTACAGTCGACTTGCCCAGTCCGGATTCCGGCATTGGAGCTGATGCTATAACGCCGCGAGATCAAAACAATATTCAACAGTCCTTCGATTATACGGAACTTTGTCAGCCGGGTTCGCTGCTGGACAATAACGGCGGCATTCCAGTCTCCGTTAACAGCATTCAACGTGGCGCAGTCAGTGTTCATGGTGGACAAAATAGTCCCACCACCTCATTGGGCGGCACAAGTGCCAATGGAAGTGCTACACGTTCAAGGCCATGGCACGACTTTGGCCGACAAAACGATGCAGATAAAATACAAATACCAAAAATCTTCACAAATGTTGGATTCAAATATCATCTGGAGTCACCAATAAGTTCATCTCAAAGACGGGAAGACGATCGAATAACTTACATAAACAAAGGACAATTTTATGGCATCACCTTGGAATACATTCCAGATTCCGATAAGCCCATCAAAAATACAACTGTGAAGAGTGTGATTATGTTAATGTTCCGGGAAGAAAAATCCCCTGAAGACGAAATTAAAGCCTGGCAATTTTGGCACAGCCGACAACATTCCGTCAAGCAACGAATCTTGGATGCAGATACCAAGAACTCAGTGGGCCTGGTTGGCTGCATAGAAGAAGTCTCCCACAATGCCATAGCAGTCTATTGGAATCCCTTAGAGAGCTCTGCAAAGATAAATATCGCCGTGCAATGTTTAAGTACAGACTTCAGCAGTCAGAAGGGTGTGAAGGGTTTACCTCTACATGTACAAATCGATACATTCGAAGATCCTCGTGATGCCCAAGTCTTCCATCGAGGCTATTGTCAAATAAAAGTTTTCTGCGATAAGGGGGCTGAACGTAAGACCCGTGACGAAGAACGTCGTGCAGCCAAACGTAAAATGACCGCTACGGGACGCAAAAAGTTGGATGAACTTTATCATCCGGTTACAGACCGTTCAGAATTTTATACAATGCAGGATCTTACCAAGCCGCCGGTTTTATTTTCGCCAGCCGACGATTTGGATAAGGGCTTCTATGGCCATGAAGCTGACGGTGCGCCAGATTTAAAAGGTGCTTCGCCATTCCTCTTGCATGGACAAAAAGTAGCCACGCCAACATTGAAATTTCACAATCATTTTCCGCCCGACATGCAGACTGATAAAAAAGATCACATTTTGGATCAAAGTTTGGCAATGGGTGAATTCGGTCCTCCTTTGAAACGTGGTCGCATGACACCACCCACCAGTGAACGCGTCATGCTGTACGTAAGACAAGAAAACGAAGATGTCTACACCCCCCTGCATGTTGTGCCACCCACCACTATCGGCCTTTTAAATGCGATTGAAAATAAATATAAGATATCGACAACGAGTATAAATAATATTTATCGAACAAATAAAAAGGGGATTACGGCGAAAATTGATGATGACATGATTTCGTACTATTGCAACGAAGACATTTTCTTATTGGAGGTGCAACAACTGGAAGAAGAGTTATACGACATAACGTTAACAGAATTGCCAAATCACTGA
Protein Sequence
MAFSTCGIREVPHRKRRRTVLTNGDSLNSGSTSPTPSTASSQAQALTMPAHHQSSPHEVIIHQHNGNSYQLPASSVAPRYFEHPQLATVVSAATPQTLISLSPHDGATHPHSQQQSDDPNGSVGMQQQQSHHHQQQQQQQHHQHHQHPQHQLIEAAATTVNLSSLGTPQLHQVQTSNGTTSFVYEYYKMPEKDATSTEADLHWRELKKGKKEVVLNPGLMKLIPIQSHLISSHHGNAGHERSSVDRNEIQGLLLGSHPSATTAAVAAAAASVTATSTLAQQQQQQQQQQQQQQQQQQHQQQQQQQQQQQQSTIVSAAGGGSGTVVITADQHRQQAATTTINIKREPEDLRKDPKNGTASNGSTASSGQKVIVLQQSPSPTHIHIKEPPLSPGSPTNHTEAMYAAGGGTQIYLQGPHQNSAAGPGGNVNTQTPSPGPYIGADGYGMYTTSRLTTAPTTTFISEPYYREYFTTTDGQGYAPTRTIYGDSEGPQPGTTYEGRFSTSSASSGVPPPHPSANISKNNGGTPIYAKTVTAAGLTVDLPSPDSGIGADAITPRDQNNIQQSFDYTELCQPGSLLDNNGGIPVSVNSIQRGAVSVHGGQNSPTTSLGGTSANGSATRSRPWHDFGRQNDADKIQIPKIFTNVGFKYHLESPISSSQRREDDRITYINKGQFYGITLEYIPDSDKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDAQVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYTMQDLTKPPVLFSPADDLDKGFYGHEADGAPDLKGASPFLLHGQKVATPTLKFHNHFPPDMQTDKKDHILDQSLAMGEFGPPLKRGRMTPPTSERVMLYVRQENEDVYTPLHVVPPTTIGLLNAIENKYKISTTSINNIYRTNKKGITAKIDDDMISYYCNEDIFLLEVQQLEEELYDITLTELPNH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00997477;
90% Identity
-
80% Identity
-